Tympanuchus pallidicinctus (lesser prairie-chicken): 128078357
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Entry
128078357 CDS
T08967
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04510
Focal adhesion
tpai04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128078357
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128078357
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Laminin_II
Motif
Other DBs
NCBI-GeneID:
128078357
NCBI-ProteinID:
XP_052534424
LinkDB
All DBs
Position
Unknown
AA seq
1793 aa
AA seq
DB search
MRGPAAFLPPLLLLLLLSLLVPLPSGPGGAAWAVSSPDAPHGCARGSCYPATGDLLVGRA
SRLSVSSTCGLRRPQPYCIVSHLQEEKKCFVCDSRRPYDARSNTDSHRIENVLTTFAPRP
KKAWWQAENGVEHVSIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRSWKTYRYFA
YDCAASFPHVPRGPPRRIDDVICESRYSDIEPSTEGEVIYRVLDPAIPIRDPYSPAIQEL
LRVTNLRVNLTKLHTLGDNLLDSRREIREKYYYALYEMVLRGNCFCYGHASECAPLSGAT
ATVNGMVHGRCVCKHHTQGLNCERCEDFYHELPWRPAEGSSTNACRRCDCNEHSRRCHFD
MAVFLATGNTSGAVCDGCQHNTMGRRCHLCKPFYYKDPSKDLRDPAVCRACNCDPDGTVD
GGLCDGADDPERGLIAGQCRCKEHVQGPRCDRCKAGFFGLSAANPQGCQRCRCDPRGTVA
DGSQCDPISGDCLCKRLVTGRSCDQCLPEHWALSHDLPGCRPCECDVGGARNNRCAAETG
QCQCRSHIVGRQCEQVEPGFYRINLDQYTYEAEDARLHKGSVVDREPHAGHPASWTGSGF
ARMQEGGWVEFHVSDVPFSMEYDVIIRYEPQHPEPWKEVKVQVLRPSPVSASSPCGNTIP
ADDQLSTSLLSGTRYVVLPHPICLEQGVSYTVRLELGCATGQQDPTTSVLIDSLVLLPRY
SSMEMFIAGDPAAMGRRETFERYRCAQHFHTVVMSPVAEPCSRLLHSLSAILHDGALPCL
CDPQGSLSAECQPQGGQCRCKPNVVGRRCHRCSPGTFGFGPGGCRPCQCSGEGSLSAVCD
TVTGQCPCRQGAHGSRCDRCQPGHWGFPTCQPCQCNGHAEECDPQTGSCLRCRDHTDGER
CQRCAVGHFGNPALGSGQHCRPCPCPDGPGGPRHFAASCYQDGRSRQVVCHCSPGYTGPR
CDECAPGYYGDPLQPGGRCLPCQCHNNIDMTDPEACDRRTGQCLRCLYNTAGPHCAECQP
GYYGDAMRHSCRRCSCNALGTDPSTCGPQQCHCDPRNGQCHCLPHVEGQSCDRCSPNFWN
LGSGQGCEPCACHPQHSLSPACNQFTGQCSCRPGFGGRTCADCQEQHWGDPRLQCRACDC
DPRGIASAQCHRGSGHCDCRPGVSGVRCDQCARGFSGTFPSCQPCHPCFGDWDRVVQDLA
SRTRALAQRASLLHHTGAAGAFEGTFRRLEESLATVRDAVAARNATVTTATFLTRATEGL
RQQIGEATEKLTQLESKLTAAQDANFNASHVLGMVDRGAHALNHSLQELGQRLHALKTSN
FLGAFDSIRQSHWESQDAERRADSSTRVVPSPVSASSATRHHTEQLLASRRDAFNRQNAA
SRRALTELAARAQELSLHTVNKKVCGAAGDVPCAESPCGGAGCRDEDGTRRCGGLSCGGA
VSTADSALDRARHAQEELRRAAGEVAQLSHRVAEAKGKADEARLQAQAALDKANQTRARV
EHSNKELRELISHVKAFLSQEGADPESIEVVASRVLELSLPASPAQIHRLAEEIKARVRS
LASVDAILEQTAGDVRQAGQLLQDAQRAKARAEGVRGTAEAVQQALEEARQAQGTAGQAL
HSTAADIQHSERTIGTMRMQTLGAEQQLAAAMERLGLLEGQMDALKVKRANNSLAATRAH
EAAGIARDRASEAKQVLEGPLRDRYRAAQELVQHQAQGAQQAGGRAQQLREEAAGLLQDA
QGKLQKLRALEEEYERNERVLDAKVAQLDGLEARMREVLATINQQVQIYNTCQ
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccccgcagccttcctccccccgcttctcctcctcctcctcctctccctcctc
gtcccgctgccgtccgggccgggaggggccgcgtgggccgtttcttctcccgacgccccc
catggctgcgcccgcggcagctgctatccggccaccggggacctgctggtggggagagcc
tcgcggctcagcgtctcgtccacctgcgggctgcggcggccccaaccctactgcatcgtc
agccacctccaggaggagaagaaatgcttcgtctgtgactcgcggagaccctacgatgcc
cgcagcaataccgacagccaccgcatcgaaaatgtgctgaccacctttgccccccgcccc
aagaaggcctggtggcaggcggagaacggcgtggagcacgtcagcatccagctggacttg
gaggctgagttccacttcacccacctcatcatgaccttcaagaccttccgccccgcagcc
atgctggtggagcgctcggccgactttggccgcagctggaagacgtaccgctacttcgcc
tacgactgtgctgcgtccttcccccacgtcccccgtgggcccccgcgccgcattgacgat
gtgatctgtgagtcgcgctactctgacatcgagccctccaccgagggggaggtgatctac
cgcgtgctggaccccgccatccccatccgcgacccctacagccccgctatccaggagctg
ctgcgtgtcaccaacctgcgggtgaacctcaccaagctgcacacgctgggggacaacctg
ctggactcacggcgggagatccgcgagaagtactactatgcgctgtatgagatggtgctg
cgtggaaactgcttctgctacgggcacgcctcggagtgtgcgccgctcagcggggccaca
gccactgtgaatggcatggtgcacgggcgctgtgtctgcaagcaccacacgcaggggctg
aactgtgagcgctgcgaggacttctaccatgagctgccctggcgcccggctgagggctcc
agcaccaacgcctgccgccggtgcgactgcaacgagcactcacggcgctgccacttcgac
atggccgtgttcctggccaccgggaacaccagcggggccgtgtgcgatggctgccagcac
aacaccatggggcgccgctgccatctctgcaagcccttctattacaaggaccccagcaag
gacctgcgggatcctgccgtgtgccgagcctgcaactgcgaccctgacggcaccgtggat
ggagggctgtgtgacggcgccgatgacccggagcgggggctgatcgcggggcagtgccgc
tgcaaggagcacgtgcagggccctcgctgcgaccgctgcaaagccggcttctttgggctc
agtgctgccaacccgcagggctgccagcggtgtcggtgtgacccccgtggcacggtggcc
gatggcagccagtgtgatcctatcagcggtgactgcctctgcaagcggctggtgaccggg
cgcagctgtgaccagtgcctgcccgagcactgggctctcagccacgatctccctggctgc
cggccttgtgagtgtgatgtgggaggtgcccgcaacaaccggtgtgctgcagaaacaggg
cagtgccagtgccgcagccacatcgtgggacggcaatgtgagcaggtggagcccggcttc
taccgcatcaacttggaccaatacacctatgaagctgaggatgcccggctgcacaagggc
tcggtggtggaccgtgagcctcacgcaggtcacccggcctcctggacagggtcaggcttt
gcccgcatgcaggagggcggctgggtagagttccatgtgagcgacgtgcccttctccatg
gaatacgatgtcatcatccgctatgagccccagcacccagagccctggaaggaggtgaag
gtgcaggtgctgcgccccagccctgtgtctgccagcagcccatgtgggaacaccatcccg
gccgatgaccagctttccaccagcctcctgtctggcacccggtatgtggtgctgccccat
cccatctgcctggagcagggcgtctcctacaccgtccgcctggagctgggctgtgccaca
gggcagcaggaccccaccaccagcgtgctcattgattcgctggtgctccttccacgttac
tcctccatggaaatgttcattgcgggtgaccccgctgccatgggacgtcgggagaccttc
gagcggtaccgctgcgctcagcatttccacactgtggtgatgtcaccggtggcagagccc
tgctcccgactcctgcacagcctctcagccatcctgcacgacggggcactgccctgcctc
tgcgacccacagggctcgctcagcgctgagtgccaaccccagggtgggcaatgccgctgc
aagcccaacgtcgtgggacggcgctgtcaccgctgctccccaggcaccttcggcttcggg
cccggcgggtgccgaccctgccagtgcagtggcgagggatcgctgagtgccgtctgcgac
accgtcacagggcagtgcccctgccgccagggtgcccacggctcacgctgcgaccgctgc
cagccgggccactggggcttcccgacctgccagccctgccagtgcaacgggcacgctgag
gagtgcgacccacagacgggcagctgcctgcgctgccgcgaccacacggacggcgagagg
tgccagcggtgcgccgtcgggcactttgggaacccggcgctgggctccggccagcactgc
cggccctgcccctgccctgacggacctggcggcccccggcacttcgctgcctcctgctac
caggatgggcgctcccggcaggttgtctgccactgcagccccgggtacacaggtccccgc
tgtgatgagtgtgcgcctgggtactacggagaccctctgcaacccggcgggcgctgcctg
ccctgccagtgccacaataacatcgacatgacagatccagaggcgtgcgaccggcgcacg
gggcagtgcctgcgctgcctctacaacacggcagggccacactgtgccgagtgccagcct
gggtactatggggatgctatgcgacacagctgcaggcgttgctcctgcaatgcactgggc
accgaccccagcacctgcgggccgcagcagtgccactgtgacccgcgcaatgggcagtgc
cactgcctgccccacgtggagggacagagctgcgaccgctgcagcccgaacttctggaac
ctgggcagtgggcagggctgcgagccctgcgcctgccacccccagcactccttgtcacct
gcatgcaaccagttcacagggcagtgctcgtgccggccgggctttgggggccggacctgt
gccgactgccaggagcagcactggggtgatccacggctgcagtgccgagcctgcgactgt
gacccccgtggcatcgccagcgcccagtgccatcgtggcagtgggcactgtgactgccgg
cctggtgtctcgggcgtccgctgtgaccaatgcgcccggggcttttctggcaccttcccg
tcctgccagccttgccacccctgctttggggactgggaccgcgtggtgcaggacctggcc
tcccgcacccgggctctggcgcagcgggccagcctcctgcatcacactggggctgctggt
gccttcgagggcaccttccgacggctggaggagagcctggccactgtgcgtgatgcagtg
gccgcccgcaatgccaccgtcaccaccgccacgttcctgacacgtgccacagaggggttg
cggcagcagattggggaagccactgagaaactgacacagctggagagcaagctgacagcg
gcacaggatgccaatttcaatgctagccacgtgctgggcatggtggaccgcggagcccac
gccctcaaccacagcctgcaagagctggggcagcggctgcatgcccttaagacctcaaat
tttcttggtgccttcgacagcattcgccagtcccactgggaatcacaggatgctgagcgc
cgagcggattcctccacccgtgtcgtacccagccccgtcagcgcttcatcagccacacgg
caccacaccgagcagctcctggccagcaggagggatgccttcaaccggcagaacgcagcc
agccggcgggcgctgacggagctggcggccagggcgcaggagctgagcctgcacacagtc
aacaagaaggtgtgtggcgctgctggggatgtgccctgcgctgagagcccctgcggagga
gccggctgccgggatgaggatgggacacgacgctgcggggggctgagctgtggcggggcc
gtctccacggctgacagtgcgctggaccgtgcacggcacgcacaggaggagctgcggcgg
gcggctggcgaagtggcccagctctcccatagggtggctgaggccaaggggaaggcggac
gaggctcggctgcaggcacaagcagccctggacaaggctaaccagaccagggcccgcgtg
gaacactccaacaaggagctgcgggagctcatcagccacgtgaaggccttcctgagccag
gagggggctgatcccgagagcattgaggtggtggcaagccgtgtgctggagttgtctctg
cctgcctcaccggcccagatccaccgcctggccgaggagatcaaggcacgggtgcgcagc
ctggccagtgtggacgccatcctggagcagacagctggtgacgtgcgccaggctgggcag
ctgctgcaggatgcccagcgggccaaggctcgggcggagggtgtgcggggcacagctgaa
gcagtgcagcaggcattggaggaggcgcggcaggcacagggcacggccgggcaggcactg
cacagcactgctgctgacatccagcacagcgagcgcaccatcggcacgatgcggatgcag
acgctgggtgcggagcagcagctggctgctgccatggagcggctcggtctcctggaagga
cagatggacgccttgaaagtgaaacgtgccaacaacagcctggcggcaacacgtgctcac
gaggcagctggcattgcgcgggaccgtgccagtgaagccaagcaggtgctggaggggccg
ctgagggaccggtaccgggccgcccaggagctggtgcagcaccaggcacagggagcgcag
caggcaggcggccgggcccagcagctgcgcgaggaggccgccgggctgctgcaggatgcc
cagggcaagctgcagaagctgcgagcactggaggaggagtatgagcggaacgagcgggtg
ctggatgccaaggtggcccagctggatgggctggaggccaggatgagggaggtgctggcc
accatcaaccagcaggtccagatctacaacacctgccagtga
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integrated database retrieval system
