Tympanuchus pallidicinctus (lesser prairie-chicken): 128078380
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Entry
128078380 CDS
T08967
Symbol
DCAF1
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tpai01001
]
128078380 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128078380 (DCAF1)
Enzymes [BR:
tpai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
128078380 (DCAF1)
Protein kinases [BR:
tpai01001
]
Serine/threonine kinases: Other
Other
128078380 (DCAF1)
Ubiquitin system [BR:
tpai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
128078380 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
LisH
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
PBP_sp32
Motif
Other DBs
NCBI-GeneID:
128078380
NCBI-ProteinID:
XP_052534487
LinkDB
All DBs
Position
Unknown
AA seq
1505 aa
AA seq
DB search
MTSGSGHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVTEMTTKQENKRPSPRKVPSDSLLPLDEEAVDMDYGEMAVDGEQEEVAGDMEISFHL
DSSHKTSSRVNSSTKLDDGGLRKSKSGKQHERDGFRKAKQKLGFSASEPERIFVELSNSS
WSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGVLVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
TFPEKELLLLIRNHLISKGLGETASILTKEADLPMTAASHSSAFTPVAAAASPVALPRTP
RIANGISARLSSHTSVGSAATSVHAQARPPASQGPLALPGPSYASNSPLIGRISFVRERP
SPCNSRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPIS
VFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPS
RDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDQYVEFSKHSQDRVIGTKGDIAHIYD
IQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISG
VFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDELLEE
RMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDSMNMDTVC
RLYEVGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENN
ENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDII
LTLNE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatctgggcatgtggactccaaggctgagctcactactttgcttgagcaa
tgggagaaagaacatggcagtgggcaagatatggttcctattctcaccaggatgtctgag
ttgattgagaaggagactgaagaataccgcaaaggggatccagacccttttgatgaccga
caccctggtcgagcggaccctgagtgtatgcttggtcacctactaaggatacttttcaag
aatgatgatttcatgaatgcgctagtgaatgcttatgtgatgacgagcagagaacctcca
ttaaacactgctgcctgcagacttcttctggatatcatgccaggactggaaactgctgtt
gtctttcaggaaaaggaaggaatagttgaaaatctctttaaatgggcacgagaagctgat
cagccattaagaacatatgcaacagggcttttaggaggagctatggaaaaccaagatatc
gctgccaattacagggatgagaattcacaactggtggctttggtgcttcgacggctgcgg
gagttacaggttactgaaatgaccacaaaacaagaaaacaagcgtcccagtcctcggaaa
gtgccatcagattctctgctgcctttggatgaagaggctgtggatatggattatggggag
atggcagtggatggagagcaagaagaagtggctggggatatggagatctcctttcatctt
gattcaagtcacaagaccagtagcagagtcaactcttctacaaagctagatgatggggga
ttaagaaaaagcaaatcagggaaacagcatgaaagagatggcttccggaaggccaagcaa
aaactgggcttctctgcttcagaaccagagcggatatttgttgaactgtccaacagcagc
tggtcagaaatgtccccatgggtgattggcactaattatacactttaccctttgactcct
gccatagagcagaggctcattcttcaatacctgactcccttaggggaatatcaagagcta
ttacccatcttcatgcaactgggatcaagggagctgatgatgtactacattgacttgaaa
cgaaccaatgatgtgctgcttacttttgaagcccttaagcatttggcatcgttgctgctg
cataacaagtttgcaactgagtttgttgctcacggaggcgtgcaaaagttgctggagatt
cctcgtccttccatggcagccacaggagtttccatgtgcttgtattatttatcttacaat
caagatgcaatggaaagggtgtgcatgcacccccataatgtgctttcagatgtggtgaac
tacaccttatggctaatggagtgctcccatgcctcaggctgctgtcatgctactatgttc
ttctccatttgcttctcctttcgtgctgtcctggagctcttcgacaggcatgatggcctt
cgtcgtctggttaacttgataagtacccttgaaatcttaaacttggaagaccaaggagct
ctcttgagtgatgatgagatctttgccagtcgccagactgggaagcacacctgcatggcc
ttgcggagatactttgaagcccaccttgctatcaaacttgaacaggtgaagcagtcactc
cagcgcactgaaggtggtgttttggtccatccacagcccccatacaaggcctgttcctac
actcatgagcagattgtagagatgatggaattcctcatcgagtatgggccagcacagctc
tactgggagccagcggaagttttccttaaattgtcttgtgtccagctcatgcttcagctc
atttcaatagcatgtaactggaagacgtactatgcaaggaacgacacagtgcgctatgct
ttggatgtgctagccatcctgactgtggttcctaaaatccaactacagctggcagaacct
gtggatgtgttagatgaagctggatctaccgtttccactgtgggtattagtatcatcctt
ggagttgctgagggtgaatttttcatccatgatgctgagattcagaaatcagcccttcag
atcatcatcaattgtgtctgcggcccagataaccggatctccagtattggcaaattcatt
tctggaactcctcggcgaaagcttcctcaggcccctaagagcagtgagcatacactggct
aagatgtggaatgtagtgcagtccaacaatggcatcaaagtgctgctgtcattgctgtct
ataaagatgccaatcacagatgctgaccagatccgagcattagcctgcaaagccttggtg
gggctctcacgcagcagtactgtccggcagattatcagcaagctgccactcttcagcagc
tgtcaaattcagcagctgatgaaagagccagtgcttcaggacaagcgcagtgagcatgtg
aagttctgtaaatatgctgctgaactgatagagcgtgtctctgggaagccattgctgatt
ggcacagatgtctccctggctcggttgcagaaagcggatgtggtggctcagtcaagaatc
acatttcctgagaaggagctgctgctcctgattcggaaccatctcatctctaagggccta
ggagaaaccgcatctatccttactaaagaagctgacctacccatgactgcagcatcccat
tcatctgccttcacccccgttgcggctgctgcctctcccgtggccctgcctcgcactcct
cgcatagctaatggcatctcagcccgtttgagtagccacacttctgtaggttctgctgcc
acatctgtccacgctcaggcaaggccacctgcatcccaaggtccacttgcccttccaggg
ccttcttatgccagcaactctcctctgattggcaggattagctttgtcagggagaggcca
tctccctgcaacagcagaaaaataagagtgttgcgacaaaaatcggaccatggcgcctac
agccagagcccagctatcaaaaagcagctggacagacaccttccttccccacccacactg
gacagtataatcacagagtaccttagggagcagcatgcccgctgcaaaaaccctgttgct
acctgtccccctttctctctctttactccccaccaatgtcctgagccaaaacagaggcgc
caagcgccaactaactttacctcacggctgacccgcagggcagcctttccgaagtacgga
ggggtggatggtggctgctttgatagacatcttatatttagcaggttccgtccaatatct
gtgttccgggaagcaaatgaggatgagagtggctttacctgttgtgctttttctgcacgt
gaacgattcttaatgctgggtacttgcacagggcagttaaaactatacaatgtattcagt
ggacaggaagaggcgagttacaactgccataactctgctatcacacatcttgagccatca
agggatggatccttattgttgacatctgctacgtggagccaacctctgtctgcgttgtgg
ggaatgaagtctgtctttgatatgaagcattccttccctgatgaccaatatgtggagttc
agcaagcactctcaagatagagtcattggcacaaaaggagacattgcccatatctatgat
attcagaccggcaacaagctattgactctgtttaacccagatctcgccaataactacaag
aagaactgtgccacatttaaccctactgatgaccttgtcctaaatgatggtgttctttgg
gatgtcagatcagcacaagccatccacaagtttgataaattcaacatgaccatcagtggt
gttttccatcccaatgggttagaggtcatagtcaacacagaaatttgggacctccgaact
ttccatttgttacatacagttcctgcgctggatcagtgtcgtgtggtcttcaactatacg
ggcacagttatgtatggagctatgttgcaggcagatgatgaagatgaacttctggaggag
agaatgagaagtccttttggctcttctttcaggacgttcaatgcaactgattataaaccc
atagctaccatagatgtaaagcggaatatctttgacttgtgcacagacagcaaggattgc
tatctggctgtcattgagaaccaaggcagcatggattccatgaacatggatacagtttgc
agactgtatgaagtgggtaggcagcgtttggcagaagatgaagaggatgaagaagaagat
caggaggaagaagaacaagaggaagaagatgatgatgaagatgatgatgatacagatgac
cttgatgaactagatacagaccagctactggaggctgagttggaggaggatgagaacaat
gagaatgctggtgaggatggagaaaatgacttttcgccctccgacgatgaggaacttgcc
aacctcctggaagagggtgatgagggtgaagatgaagactctgatgctgatgaggaagtt
gagctgattcttggagatactgacagctccgataattccgacttggaagatgacataatc
ttgactctgaacgagtga
DBGET
integrated database retrieval system
