Tympanuchus pallidicinctus (lesser prairie-chicken): 128078447
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Entry
128078447 CDS
T08967
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128078447 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128078447 (MBD4)
03400 DNA repair and recombination proteins [BR:
tpai03400
]
128078447 (MBD4)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
128078447 (MBD4)
DNA repair and recombination proteins [BR:
tpai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
128078447 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
128078447
NCBI-ProteinID:
XP_052534635
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MERARRRRAPPGGRSGVCGAEGTTLRSGRALAERCHHAGTAGGATAPAGSGVRNGGARSS
RSDGSEARRGEGGKAERRPNGAGEEAAGRAARDGGARRSSVGSNGESARSERRRAARGRR
EVERRAGCAEPAADGRNGRQEPHAAPAAPGSRRSESDPEMGSDGLRPAGDESFAAAKIRR
EESVPRTQVDRRKTSPYFSSKYSKEAPSPPRRKAFRKWTPPRSPFNLVQETLFHDPWKLL
IATIFLNKTSGKMAIPVLWEFLRKYPSPEVARTADWKEMSELLRPLGLYALRAKTIIKFS
GLGQHGVCSDLGLHGEGCVCVPDEYLHKQWKYPIELHGIGKYGNDSYRIFCVNEWKEVRG
AAVQPQDHKLSVYHTWLWENYEKLSGD
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagcgcgtcggcggcgcgcgcctccgggaggtcggagcggagtgtgcggcgcc
gaaggaacgacgctgcggtccggacgggcgctggcggagcgctgccatcacgccggcaca
gctggcggcgccacggccccggctgggagcggggtgcggaacggcggagcgcggagttcc
cggagcgatgggtccgaggcgcggcgcggggaaggcggcaaggcggaacggcgcccgaac
ggcgccggagaggaggcggcggggagagccgcgcgggacggcggagcgaggaggagctcc
gtaggaagtaacggggaaagcgcccggagcgagaggaggagagcggcgcggggccggcgg
gaagtggagcgccgggcgggatgcgcggaaccggccgcggatgggcggaacggccgccaa
gagccgcacgcagcgcccgcggctccgggatcgcggcgctccgaatccgaccccgaaatg
gggagcgacggcttgcggcctgctggcgacgagagcttcgcggcagctaaaatacggcga
gaagaatctgtcccacggacacaagtggataggaggaaaacgagtccgtatttttcaagt
aaatacagtaaggaagctcccagcccgcctaggaggaaggccttcaggaaatggactcct
ccacgctccccttttaatttggtccaagaaacacttttccacgatccgtggaaacttctc
attgcgaccatatttctcaataagacttcaggtaaaatggcaattcctgtgctctgggag
ttcctcaggaagtacccttcccctgaagtagccagaactgcagactggaaagaaatgtca
gagctgctcagacctctcggcctctatgcgctcagagcaaaaacaataatcaagttttca
ggtctggggcagcatggtgtctgctcagacctgggcctgcacggtgagggctgtgtgtgt
gttccagacgagtacctgcacaagcagtggaagtaccccattgagctgcacggaatcggg
aagtacggaaatgactcctacagaatcttctgcgtcaatgagtggaaagaggtgcgcggt
gctgctgtgcagcctcaggaccacaagctgagcgtctaccacacatggctctgggaaaac
tatgagaagctgagtggggactga
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