Tympanuchus pallidicinctus (lesser prairie-chicken): 128078448
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Entry
128078448 CDS
T08967
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X1
KO
K14004
protein transport protein SEC13
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03013
Nucleocytoplasmic transport
tpai04141
Protein processing in endoplasmic reticulum
tpai04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128078448 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128078448 (SEC13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
128078448 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128078448 (SEC13)
04131 Membrane trafficking [BR:
tpai04131
]
128078448 (SEC13)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128078448 (SEC13)
Membrane trafficking [BR:
tpai04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
128078448 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
128078448 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
128078448 (SEC13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_EML
NBCH_WD40
WD40_RFWD3
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
128078448
NCBI-ProteinID:
XP_052534639
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIK
RFASGGCDNLVKIWKEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF
IWTCDDASGNSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGLWACIS
DVNKGQGGVSAVTEGQQNEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtttccgtcattaacaccgtggacacctctcacgaggacatgattcacgatgcacag
atggattactatggcactcggctggcgacctgttcttcagacagatctgtgaaaatcttt
gatgttcggaatggaggtcaaatcctcattgcagacctaagagggcatgaaggtccagtg
tggcaagttgcctgggctcatcctatgtacggaaacatcttggcttcctgctcctatgac
aggaaggttattatctggaaggaagaaaatggcacttgggaaaagacctatgagtacaca
gggcacgattcctcagtgaattctgtctgctgggcgccacacgactacgggctgatcctg
gcctgtgggagctccgatggcgcgatctcattactgagctacactggagatgggcagtgg
gaagtcaagaagatcagcaatgcacatactattggatgtaatgcagttagctgggctcct
gctgtcgtaccaggcagccttatagaacaaccatctggtcaaaaaccaaactacatcaaa
agatttgcatctggtggttgtgacaaccttgtcaagatctggaaagaagaagatggccag
tggaaagaagagcagaagctggaggcacacagtgactgggttcgagatgtagcctgggct
ccatccataggcttgccaacaagtaccattgctagctgttcacaggatggcagagtgttt
atctggacgtgcgatgatgcctctggaaattcctggtcaccaaaattgctgcataagttc
aatgatgttgtctggcatgtgagttggtccattactgcaaatatccttgcagtgtctgga
ggagacaataaagtcacactgtggaaggaatcagtagatgggctgtgggcatgcatcagc
gacgtcaacaagggccaaggaggagtgtctgccgttacagaagggcagcagaacgagcag
tga
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integrated database retrieval system
