Tympanuchus pallidicinctus (lesser prairie-chicken): 128078478
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Entry
128078478 CDS
T08967
Symbol
EDEM1
Name
(RefSeq) ER degradation-enhancing alpha-mannosidase-like protein 1 isoform X1
KO
K10084
ER degradation enhancer, mannosidase alpha-like 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128078478 (EDEM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tpai04091
]
128078478 (EDEM1)
Lectins [BR:
tpai04091
]
M-type lectins
128078478 (EDEM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_47
Motif
Other DBs
NCBI-GeneID:
128078478
NCBI-ProteinID:
XP_052534691
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All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MQWRSLVLGLLLLRLGLHALLALLPALAPGLCLRLRLPFPFPPRSAALGHPGAARPPPGG
GSSHWGSLRGGGGAAGRDEYERRYSAAFTPQLRARLRDAARGMFAFGYDSYMQHAFPSDE
LDPLHCCGRGPDRDDPSNLNINDVLGNYSLTLIDALDTLAVMGNSSEFQKAVKLVIDTVS
FDKDSTVQVFEATIRVLGSLLSAHIIITDAKQPFGDMTIKDYDNELLHMAHDLAVRLLPA
FENTKTGIPYPRVNLKKGVPPNSNNETCTAGAGSLLVEFGILSRLLGDSTFEWVARRAVK
ALWSLRSNNTGLLGNVVNIQTGHWVGKQSGLGAGSDSFYEYLLKSYILFGEKEDLEMFID
AYQNIQNHLRRGREACNEGEGDPPLYVNVNMFTGQLMNTWIDSLQAFFPGLQVLIGDVED
AICLHAFYYAIWKRYGALPERYNWQLQAPDVPFYPLRPELVESTYLLYQATKNPFYLHVG
MDILQSLEKYTKAKCGYATLHHVVEKTKEDRMESFFLSETCKYLYLLFDEDNPVHKSGNK
YMFTTEGHIVSVDERFRNSLWQDILPGEEDSTEKVKPNELKAVNFSSNCNRVPDERRYLL
PLKSNYMRQIDRMVGLI
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcaatggcgctcgctggtgctggggctgctgctgctgaggctggggctgcacgcgctg
ctggcgctgctccccgcgctggcgcccggcctctgcctgcgcctccgcctcccgttcccc
ttcccgccgcgttccgccgccctcggccatcccggcgccgctcggccgcctcccggcggg
ggctcctcgcactggggttcgctgcggggcggcggcggcgcggcggggcgcgatgagtac
gagaggcgttacagcgccgcgttcaccccgcagctgcgggcacggctgcgcgacgccgcc
cgcggcatgttcgccttcggctacgacagctacatgcagcacgccttccccagcgacgag
ctcgaccccctgcactgctgcggccgcgggcccgaccgcgacgacccctcaaatctgaac
atcaacgatgtcttaggaaactactcgctaacgctgatagatgcactggataccctagcg
gtaatgggaaattcctccgaattccagaaggctgtgaagttggtgattgacacagtttca
tttgacaaagactcaacagtccaggtttttgaggcaaccatcagggttttgggcagcctg
ctttctgcccacataataattacagatgccaaacagccttttggtgacatgaccattaag
gattatgacaacgaactgctgcacatggctcacgacctcgcagtgagactgctgccagca
tttgagaacaccaaaactgggattccgtatcctcgggtcaacctgaagaagggagttcct
ccaaacagcaataatgaaacttgcactgcaggagccggttccttgttggtggagtttggc
attctgagcaggctgcttggtgattccacgtttgaatgggtggccaggagagctgtcaaa
gcactctggagtctcaggagtaacaacactggactgctaggaaatgttgtgaatattcaa
actggccattgggttggaaagcagagtggcttgggagcaggatcagattcgttttatgaa
tacctcctgaagtcctacatcctctttggagagaaggaagacttagagatgttcattgat
gcttatcagaacattcagaaccacttaagaaggggtcgagaagcttgcaatgaaggtgaa
ggtgacccgcctttgtatgtgaatgtaaacatgttcactggacagctgatgaacacgtgg
attgactctttgcaagccttttttcctggactacaggtgttgataggagacgtagaagat
gctatttgtctccatgctttttattatgccatatggaagcgatatggagctctcccagaa
agatacaactggcagttgcaagcaccggatgttcccttttatccactgaggccagagctg
gtggaatccacctatcttctttaccaggccacaaagaacccattttaccttcatgtggga
atggatattctacagagcctggaaaaatacacaaaagcgaagtgtggctatgctacctta
caccatgtggtggagaagacaaaagaagatcgaatggagagcttttttctcagtgaaaca
tgtaaatatttgtacctgttatttgatgaagacaatccagtgcataagtctggaaataaa
tatatgtttactactgagggacatattgtgtctgtggatgaacgttttcggaactcgctg
tggcaggatatcctccctggggaagaggacagcacagaaaaagttaaacctaacgaatta
aaggccgtcaacttcagctctaattgtaacagagttccggatgagaggagatatttgctg
ccattgaagagcaactacatgagacagatcgatcggatggtgggcttgatctga
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