Tympanuchus pallidicinctus (lesser prairie-chicken): 128078540
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Entry
128078540 CDS
T08967
Symbol
LRIG1
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 1 isoform X1
KO
K24610
leucine-rich repeats and immunoglobulin-like domains protein 1/3
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
128078540 (LRIG1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
Ig_2
ig
LRR_5
LRR_1
V-set
LRR_9
C2-set_2
Ig_5
LRRCT
LRRNT
DUF2201
Motif
Other DBs
NCBI-GeneID:
128078540
NCBI-ProteinID:
XP_052534808
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MAVVPSRGGGGSALPLLLAVLLGSAAACPDGCVCDGERLRCGGLGLLEVPRELPHGLRHV
NLSYNKLTEIDPSAFAELLNLQEVQLNNNELTAIPSLGPAASNVRALHLHHNRIRSIEAS
QLKPYVALETLDLSFNDITEIRNGCFPQGLHIKELYLGSNRISTLEPGAFDSLSRSLLTL
RLSKNRITQLPVKAFRLPRLTQLELNRNRIRLIEGLTFQGLDSLEVLKLQRNNISKLTDG
AFWGLAKMQVLHLDYNSLTEVNSGSLYGLSSLHQLHLSNNSISRINPDGWSFCQKLHELI
LSYNNLTRLDEGSLADLGGLHVLRLSHNSINHIAEGAFKGLKNLRVLELDHNDISGTIED
TNGAFTGLENLSKLTLFGNKIKSVAKKAFSGLEALEHLNLGDNAIRSIQADAFAKMKSLR
QLHINSDSFLCDCQLKWLPPWLVEKELQSFVVATCAHPESLKSKSIFAVLPESFVCDDFP
KPQIIIQPETTVAVLGKDIRFTCSAASSSSSPMMFAWKKDNEVLHNAEIENFAHVRAKDG
EVMEYTTILHLRHVTFAHEGRYQCIITNHFGSTYSNKARLTVNVLPSFIKTPHDITSRTG
TTARLECAAEGHPTPQIAWQKDGGTDFPAARERRMHVMPDDDVFFITDVKIEDMGVYSCT
AQNSAGSVLANATLTVLETPSLIHPLEDHVVSVGETVALQCKATGSPPPRITWLKGDQPL
IVTERHHFTSGNQLLIVRNVVLEDAGKYTCEMSNTLGTERAHSHVSILQSLGCRKDRTTV
GIITIAVVCSIVLTSLVWVCIIYQTRKKSEEYSVTNTDETIVPPDVPSYLSSQGTLSDRQ
EAVVRGDNQQPNGHIDSNGMCQTDAGRCPDAEAPTVGCRQPKLCIGYNKDTWKTEDTADG
MLVPDKTGYGLPVVCTDCSGSTDSMNIHICPGESQYYAEGLQTLDASYHNALSSKERSRK
RGAGTTSLLHPQQCNGIASKRMEADGTLYPSNHDRITAVSTASPLLADQHGSSQSGAKPS
ELNNLNLVRASPAGGSLKQLNVLPEIPPTLLDLQSEAEAKQALLANGFTPKSCDSSHALK
PSSRSID
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtgccgtcgcggggcggcggaggctccgcgctgccgctgctgctggcggtg
ctgctgggctcggccgccgcctgccccgacggctgcgtctgcgacggggagcggctgcgc
tgcggcgggctggggctgctcgaggtgccccgggagctgccccacgggctgcggcacgta
aacctgagctacaataagttgaccgagattgatccttctgcctttgcagagctgttgaac
ctgcaggaagtgcaactgaacaacaatgaactgactgccattccctccctgggccctgct
gcttccaacgtccgtgccctccacctgcatcacaacaggatacgcagcattgaagcaagt
caactgaagccctacgttgccctggaaacattggacctgagtttcaatgacatcacggaa
atccgaaacggctgctttccacagggacttcacataaaggagctctacctggggagcaac
agaatcagcaccctggagcctggtgcttttgatagtctgtcacggtccctgctaacactt
cgtctgagtaaaaacaggatcactcagcttcctgtcaaggcattcaggctgcctaggctg
acacaactggagctgaaccggaatcgcatccgcctgattgaaggcctgacgttccaggga
ctggacagcctggaagtcctgaaactccagcgcaacaacatcagcaaactgactgatgga
gctttctgggggctggccaagatgcaagttctgcacctggattacaacagcctgacagaa
gtaaacagcggctcgctctatggcctttcatctctccaccagcttcacctcagtaacaac
tccatatcccgcatcaaccctgacggctggagcttctgtcagaagctgcatgagctaata
ctctcttacaacaacctcaccaggctggatgagggaagcttggcagacctcggaggactg
catgtactgcggctgagccacaactccatcaatcatattgcagaaggtgccttcaaggga
ctcaaaaacctgcgtgttctggaactggaccacaatgacatctcaggcacaatagaggac
accaacggagcctttacaggcctagaaaatctgagcaagctaactctgtttggaaacaag
atcaagtcggtggccaagaaagcgttctcagggttggaggccctggagcacctgaacctt
ggagataacgccatccgctccatccaagcagatgcttttgctaagatgaagagcctgcgg
cagctccacatcaacagcgacagcttcctctgtgactgccagctgaaatggctgcccccg
tggttggtggagaaagagctgcagtccttcgtggtggccacctgcgcccatccggagtcg
ctgaagagcaaaagcatttttgctgtcctgccagaaagttttgtgtgtgatgatttcccc
aagcctcagatcatcatccagccggagaccacggtggccgtccttgggaaggacatccgt
ttcacgtgctcggctgccagcagcagcagctcccccatgatgtttgcgtggaagaaagac
aacgaagtgctgcataatgctgagattgagaacttcgcccacgtgcgggcgaaggatggc
gaggtgatggaatacaccaccattctgcacctccgccacgtcacctttgcccacgagggc
cgataccagtgcatcatcaccaaccactttggctccacctactccaacaaggctcgactc
actgttaatgtgctgccctccttcatcaaaactccccacgacatcaccagccggacaggg
acaacggcacggctggagtgtgcagctgaaggacaccccaccccacaaattgcctggcag
aaagatgggggcacagacttccctgcagcccgggaacgccgcatgcacgtcatgcctgat
gacgatgtcttcttcattacggatgtgaagatagaagatatgggtgtctacagctgcaca
gcacagaactctgcagggtctgtgcttgcaaatgccaccctgactgtactggagacgccg
tctctgattcacccactggaagaccacgtagtgtctgtaggtgagactgtggctcttcag
tgcaaagccacggggagcccaccgccccgcattacctggctgaaaggcgaccagcccctg
atcgtgacagaaaggcatcacttcacctctggcaaccagctcctcatcgttaggaatgtt
gtcttggaagacgctgggaaatacacctgtgagatgtccaacaccctggggacagagcgt
gcgcacagccacgtgagcatcttacagtctcttggctgcagaaaggaccgtaccactgtg
gggatcatcaccattgctgtggtgtgtagcatcgtgctgacttcgctggtctgggtctgc
atcatctaccaaaccagaaagaagagtgaggaatacagtgtgaccaacacagatgagacc
attgtgcctccagacgtgccgagctacttgtcctcacaagggactctttctgaccggcag
gaagcggtcgtcagaggagataaccagcagcctaatggacacatagacagcaatggtatg
tgtcagactgatgctggaaggtgtccagatgctgaagctcccactgtaggttgcagacag
ccaaagctgtgcatcggctataataaagacacttggaaaactgaagacacggctgatgga
atgcttgttccagataagacaggctatggcctgcccgttgtgtgcacagactgcagcggc
agcacagacagcatgaacatccacatctgtcccggcgagtcgcagtactacgcggagggc
cttcagactctggatgcttcctaccacaatgcactgagcagcaaggaacggagcaggaag
aggggtgcaggcaccaccagccttcttcatccgcagcagtgcaatgggattgccagcaag
aggatggaagctgatgggaccctttaccccagcaaccacgacagaataacagccgtgagc
accgccagccctctgcttgcagaccaacacggctcttcgcaatcaggagcaaagccttca
gagcttaacaacctgaacttggtgagagcttcgccggcaggagggtcactaaagcaactg
aacgtgcttcctgaaattcccccaacactactggatctgcagagcgaagcagaagcaaaa
caggccctcctggccaatggcttcacacccaagtcgtgcgactccagtcatgcgttgaag
ccctcgagcagatcgatagactga
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