Tympanuchus pallidicinctus (lesser prairie-chicken): 128078544
Help
Entry
128078544 CDS
T08967
Symbol
CACNA1D
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04010
MAPK signaling pathway
tpai04020
Calcium signaling pathway
tpai04218
Cellular senescence
tpai04260
Cardiac muscle contraction
tpai04261
Adrenergic signaling in cardiomyocytes
tpai04270
Vascular smooth muscle contraction
tpai04530
Tight junction
tpai04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128078544 (CACNA1D)
04020 Calcium signaling pathway
128078544 (CACNA1D)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
128078544 (CACNA1D)
09144 Cellular community - eukaryotes
04530 Tight junction
128078544 (CACNA1D)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
128078544 (CACNA1D)
09153 Circulatory system
04260 Cardiac muscle contraction
128078544 (CACNA1D)
04261 Adrenergic signaling in cardiomyocytes
128078544 (CACNA1D)
04270 Vascular smooth muscle contraction
128078544 (CACNA1D)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128078544 (CACNA1D)
Ion channels [BR:
tpai04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128078544 (CACNA1D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
DUF4834
Motif
Other DBs
NCBI-GeneID:
128078544
NCBI-ProteinID:
XP_052534817
LinkDB
All DBs
Position
Unknown
AA seq
2183 aa
AA seq
DB search
MQHHQQQQQPEQHSEEANYASSTRIPLPGDGPTTQSNSSAPSKQTVLSWQAAIDAARQAK
AAQNMNSTTAQPVGSLSQRKRQQYAKSKKQGNTSNSRPPRALFCLSLNNPIRRACISLVE
WKPFDIFILLSIFANCVALAVYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKIIAYG
LLLHPNAYVRNGWNLLDFVIVVVGLFSVILEQLTKETEGGSHSGGKPGGFDVKALRAFRV
LRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKSCFLI
DSDILVEEDPAPCAFSGNGRQCVMNGTECKGGWVGPNGGITNFDNFAFAMLTVFQCITME
GWTDVLYWVNDAIGCEWPWIYFVSLIILGSFFVLNLVLGVLSGEFSKEREKAKARGDFQK
LREKQQLEEDLKGYLDWITQAEDIDPENDEEADEEGKRNTSMPTSETESVNTENVSGEGE
NSACCGSLCQTISKSKFSRRWRRWNRFNRRKCRAAVKSVTFYWLVIVLVFLNTLTISSEH
YNQPDWLTQIQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGIVETIL
VELEIMSPLGISVFRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIIIF
SLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSS
GMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEAEEKERKKNARKESLE
NKKSEKSEGDQKKPKDSKVTIAEYGEGEDEDKDPYPPCDVPVGEDEEDEEDEPEVPAGPR
PRRISELNMKEKITPIPEGSAFFIFSSTNPIRVGCHRLINHHIFTNLILVFIMLSSVSLA
AEDPIRSHSFRNNILGYFDYAFTAIFTVEILLKMTAFGAFLHKGSFCRNYFNLLDLLVVG
VSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTL
LQFMFACIGVQLFKGKFYKCTDEAKQNPEECRGIYIVYKDGDVDNPMVKERVWQNSDFNF
DNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGPVYNYRVEISIFFIIYIIIIAFFMM
NIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNS
TGFEYIMFVLIMLNTLCLAMQHYGQSKLFNDAMDIMNMVFTGVFTVEMVLKLIAFKPKGY
FSDAWNTFDSLIVIGSIVDVVLSEADHYFTDAWNTFDALIVVGSVVDIAITEVNPKPTET
VTTDESGNSEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIA
MLFFIYAVIGMQVFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPG
KRCDPESDYNPGEEYTCGSNFAIIYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILG
PHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPL
NSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAGD
DEVTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNTTIALQAGLRTLHDIGPEIRRAI
SCDLQDDEPEENNPDEEEEVYKRNGALFGNHINHISSDRRDSFQQINTTHRPLHVQRPSF
PSASDPEKNVYPQTGNSVYHNHHNHNSVGKQVPNSTNANLNNANVSKVVHGKHANFGSHE
HRSENGYHSYSKADHEKRRRPSSRRTRYYETYIRSDSGDGRRPTICREERDIRDYCNDDH
YLGEQDYYSGEEYYEEDSMLSGSRHVYDYHCRHHCHDSDFERPKGYHHPHGFFEEDDSQT
CYDTKRSPRRRLLPPTPASNRRSSFNFECLRRQSSQDDIPLSPNFHHRTALPLHLMQQQV
MAVAGLDSSKAHKHSPSRSTRSWATPPATPPNRDRTPYYTPLIQVDRAESTEHMNGSLPS
LHRSSWYTDDPDISYRTFTPANLTVPNDFRHKHSDKQRSADSLVEAVLISEGLGRYAKDP
KFVSATKHEIADACDMTIDEMESAASNLLNGNISNGTNGDMFPILSRQDYELQEFGPGYS
DEEPEPGRYEEDLADEMICITSL
NT seq
6552 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccaccagcagcagcagcagcccgagcagcactcagaagaggcgaactatgca
agcagcaccagaattcctctccctggtgacggaccaactactcagtccaacagttcagca
ccatccaagcaaactgttctgtcttggcaagctgcaattgatgctgctagacaagcaaag
gctgcccaaaatatgaattccaccacagctcagcctgtaggatctctgtcccaaagaaaa
cgccagcaatatgccaagagcaaaaaacagggtaatacatctaatagtcggccaccccgt
gcccttttctgtttatccctcaacaaccccatacgaagagcctgcattagtctagtagaa
tggaaaccatttgacatatttatactactgtctatttttgccaactgtgtggccttagct
gtttacatcccattcccagaagatgattctaattcaactaatcataatttggaaaaagta
gaatatgccttcctgataatttttacagttgaaacatttttgaagattatagcatatgga
ttattattacaccccaatgcgtacgttagaaatggatggaatttattggattttgtaata
gtagtagtaggattatttagtgtaatattggaacaattaaccaaagaaacagaaggtggc
agccactcaggtggcaaacctggaggctttgatgtcaaagccctaagagcctttcgtgta
ttgcgacctctccggcttgtatcaggagtgcccagtttacaagttgtcctgaactccatt
ataaaagccatggttcccctgctccatattgcccttttggtattgtttgtaatcataatc
tatgctattataggattggaactttttattggaaaaatgcacaaatcttgttttcttatt
gattcagatatactagttgaagaagatccagcaccttgtgcattctcagggaatggacgt
cagtgtgtcatgaatggcactgaatgtaagggtggttgggttggaccgaacggaggcata
acgaacttcgataattttgcatttgcaatgttgactgtgttccagtgtataaccatggaa
ggatggactgatgtgttatactgggtaaatgatgcaataggatgtgaatggccatggatc
tattttgttagtcttatcatccttggctcatttttcgtacttaacctggttcttggtgta
cttagtggggaattttccaaggaaagagaaaaagccaaggcccgaggggactttcagaag
ctacgtgaaaagcagcagcttgaagaagatctgaagggatatttagactggattacacag
gcagaagacattgatcctgagaatgatgaagaggctgatgaagaaggcaaacggaacaca
agcatgcccaccagtgaaactgagtcagtgaacacagagaatgtgagtggagaaggagag
aactcagcatgctgtgggagcttatgtcaaaccatctcaaaatccaagttcagtcggcgc
tggcgtcgctggaatcgatttaatcgaagaaaatgtagagctgcagtaaaatctgtcaca
ttttattggcttgttattgtcttggtctttctgaacacattaactatctcatcagaacat
tataaccaacctgactggctgacccagatccaagatatcgcaaataaagttcttctggct
ttgttcacctgtgaaatgttagtaaagatgtacagcttgggtctacaggcttattttgtt
tctctttttaaccgctttgattgcttcgttgtttgtggtggcattgttgaaaccattttg
gtggagttggaaattatgtcaccccttggaatttcagtgtttcgctgtgttcgtctcctg
cgtatttttaaagtaacaaggcactgggcatccctgagcaacttggtagcatccttgtta
aactcaatgaagtccattgcttcactgttgcttctgcttttcctcttcatcataatcttc
tcgttgcttggaatgcagctgtttggaggcaaatttaattttgatgaaactcaaacaaaa
cggagcaccttcgataattttccacaagctcttttaactgtattccagattctaacaggt
gaagactggaatgctgttatgtatgatggcataatggcgtatggtggtccatcatcttca
ggcatgatagtctgcatatatttcattatcctcttcatctgcggtaactatatcttacta
aatgtcttcttggccattgctgtggataacttggcagatgctgaaagtctaaatactgcc
cagaaagaagaagcagaagaaaaggaaaggaaaaagaatgcaagaaaagagagtctggaa
aataaaaaaagtgagaagtcagaaggtgaccaaaagaaacccaaggatagtaaggtgaca
attgctgaatatggagaaggagaggatgaagataaagatccttatccaccctgtgatgta
ccagtaggtgaagatgaagaagatgaggaggatgaacctgaggtaccagcaggcccacgt
ccccgtagaatatcagaactaaatatgaaggagaagataacaccgatccctgaagggagt
gccttcttcattttcagcagcaccaatccaattcgagtgggatgccacaggctcatcaat
caccacatctttaccaatctcatccttgtcttcatcatgctgagcagtgtttccctagca
gcagaagatccgatccgcagccactcatttcgaaataacatacttggttactttgactat
gctttcacagccatctttactgttgaaatcctgttaaagatgacagctttcggagcattc
ctccataaagggtccttctgcagaaattactttaatttgctggatttgctggttgtgggt
gtttctctggtgtcatttggtattcaatcaagtgctatctcagttgtgaagatcctcaga
gttttgagagtcttgaggcccctaagggctataaacagagcaaaaggacttaagcacgtt
gttcagtgtgtctttgtggctattagaactattggtaatatcatgattgttacaactctg
ctgcagttcatgtttgcttgtattggagtgcagctcttcaagggaaaattctacaagtgc
actgatgaggcaaaacagaatccagaggaatgccgggggatatacattgtttataaagat
ggagatgttgataatccaatggtcaaagagagggtctggcaaaatagcgatttcaacttc
gacaatgttctgtctgctatgatggcccttttcaccgtgtccacttttgaaggctggcct
gcgctgctgtacaaagccattgattccaatggcgagaatgtaggacctgtatacaactac
agagtggagatctccatttttttcatcatctatatcatcattattgctttctttatgatg
aacatatttgttggttttgtcattgttacattccaagaacagggagaacaagaatacaag
aactgtgagctggacaaaaatcagcgtcagtgtgtggaatatgccttgaaggcacgtcct
cttcgtagatacattccaaaaaatccttaccagtacaagttctggtatgtggtgaattct
actggatttgaatacatcatgtttgtcctcatcatgctgaacacactttgcctggctatg
cagcactatggacagtctaagctctttaatgatgcaatggacattatgaatatggttttc
acgggagtgttcactgttgaaatggttttgaagctgattgcattcaaacccaagggctat
tttagtgatgcctggaatacgtttgactccctcatcgttattggcagcatagtagacgtc
gttctcagtgaagctgatcactatttcactgatgcatggaacacttttgatgccttaatt
gttgttggtagcgtcgttgatattgctataacagaagttaatccaaagccaactgaaaca
gtcacaactgatgagtctgggaactccgaagacagcgcgagaatctccatcacttttttc
cgtcttttccgagtgatgaggttggtgaagctgcttagcagaggagaaggaatcagaact
ttattgtggacatttattaagtcatttcaggctctgccttatgttgctcttctgatagct
atgctgttcttcatctatgctgtcattggaatgcaggtgtttggaaaagtggccatgaga
gacaacaatcaaataaacagaaacaacaattttcaaactttcccccaagctgtgctgctt
ctcttcaggtgtgcaactggagaagcttggcaggaaatcatgctggcatgtttgcctgga
aaacgctgtgatcctgaatctgattataatccaggggaagaatacacgtgtggaagcaat
tttgccatcatttactttatcagtttttatatgctttgtgcatttttgataataaactta
tttgtggctgtcattatggataactttgactatttgacacgtgactggtccattctgggt
cctcatcatttggatgagttcaaaaggatatggtcagaatatgatcctgaagcaaaggga
aggataaagcatcttgatgtggttacgttactgagacgcattcagccaccacttggtttt
ggcaaattatgccctcaccgagtggcctgcaagaggttagtagccatgaatatgccacta
aatagtgatggaaccgtcatgttcaatgctactttgtttgctttggttaggactgctcta
aagataaaaacagaaggtaacctagagcaagcaaatgaagaacttagagcagttataaag
aaaatatggaagaaaactagcatgaaattactcgaccaagttgtccctccggctggcgat
gatgaggtaaccgtggggaagttctatgccaccttcctgatacaggactactttaggaaa
ttcaagaaacgcaaagaacaaggactggtggggaaatatcctgcgaagaataccacgatt
gctctgcaggcaggactaaggacacttcatgatatcggccctgaaatacgccgagctata
tcctgtgacttgcaagatgatgaaccagaggaaaacaatccagacgaggaggaagaagtg
tataaaaggaatggtgccctctttggcaaccatataaaccacattagcagtgacagacga
gattcgtttcagcagatcaacaccacgcaccgtcccttacatgtgcagcggccttcattt
ccatctgcaagcgatcctgagaaaaatgtatatcctcagacaggaaattctgtgtaccac
aatcatcataaccacaactcagtaggaaaacaagttccaaactcaacaaatgccaatctc
aataatgccaatgtatccaaagttgttcatgggaaacacgctaattttggaagtcatgag
catagatctgaaaatggttaccattcatactctaaagctgaccatgagaagcgtagaagg
ccaagcagtaggagaacccgctactacgaaacatatattaggtctgactctggtgatggc
cgtcgaccaactatttgccgtgaagaacgtgacattcgagactattgcaatgatgatcat
tatttgggagagcaggattactatagtggagaagaatactatgaggaagacagcatgttg
tcaggaagcaggcatgtatatgattaccactgtagacatcactgtcatgactcagatttt
gaaagaccaaaaggttaccatcacccacatgggttttttgaggaagatgattcacagacc
tgttatgatacgaaaagatctcctaggagacggctgctacctccaacaccagcatcaaat
agacgatcttccttcaattttgaatgcctccgccgacagagtagtcaggatgatattcca
ctctctccaaatttccaccatcgcacagctttaccacttcacttaatgcagcagcaggtc
atggctgttgcgggtctggattccagtaaagctcataaacattcaccaagtcgttccacg
cgttcatgggctaccccacctgcaacccctcccaacagggaccgtaccccgtattacaca
cctctaatccaagttgacagggctgaatctacagaacatatgaatggtagcctgccttcc
ttgcacaggagctcttggtacacagacgaccctgatatctcctaccgaacatttacacca
gccaatttaacagtacctaatgactttaggcataaacacagtgacaaacagaggagtgca
gacagtttggtagaagcggtacttatatctgaaggcctaggaaggtatgcaaaggaccct
aaatttgtttcagctacaaaacatgagattgctgatgcttgtgacatgactatcgatgag
atggaaagtgcggcaagtaatcttctcaatggaaatattagcaatgggaccaatggggat
atgttccccattttaagcagacaagattatgaacttcaagaatttggtcctggctacagt
gacgaagaaccagaaccaggacgatatgaagaagatttagccgatgaaatgatatgcatt
acaagcttatag
DBGET
integrated database retrieval system
