Tympanuchus pallidicinctus (lesser prairie-chicken): 128078567
Help
Entry
128078567 CDS
T08967
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
128078567 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpai03400
]
128078567 (XPC)
DNA repair and recombination proteins [BR:
tpai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
128078567 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
128078567
NCBI-ProteinID:
XP_052534864
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MARKRKSSVVREPAGKRRQGEAGARREREEEREEEREEGDFVEEKPSVKKSRAGVAAGKK
DDGDAGVAKSADKPSKQKRRAKENEKSPENKRTCHKEQTCSDSLKAPQKEIKLKRESPIK
KEMDEDNTDDDDESEDEWEDVEELQEPVIDKLEEGAVLPAAVLPSNPVEIEIETPEQLKR
RERREKRKAEFETYVRRMIKRFTKEVREDTHKVHLLCLLANGFYRNRICSQPDLHAIGLS
IIPIHFTKVPAGQVDLLYISNLVKWFVGTFTVNDELSSEKGEPLQSTLERRFAIYAARDD
EELVHIFLIILRALQLLCRLVLSLQPIPLKEMKAKEKSTSKKQSLSSTSEGQESSGTTPK
VVAKKCPCKKAKRDEKSSGSEEDNEESKKTKSAQTKRTHKSKLTTGNKEQKETGNEDSGL
GEKDVPVRPKNSRRRRVASKVCYKEESGSDEGSVSDFEISGEESDISDEDFETVSKKWRS
SRGAQKSKAMTIKSPKSETSESRLSRNSLGAEPRPAKSTAPTLPQAQRKRNKIISSDEDD
GQQMVQKVVGTDQWLEVFLEREDRWVCVDCVHGIVGQPQQCFTYATKPLSYIVGFDNDGS
VKDVTQRYDPVWMTTTRKKRVDPEWWEDTLQPYKSPFADRDKKEETEFQVKLQDQPLPTA
IGEYKNHPLYALKRHLLKYQAIYPESAAILGYCRGEAVYSRDCVHTLHSKDTWLKQARVV
RIGEVPYKMVKGYSNQARKARLAEPANRDKADLALFGRWQTEEYQPPIAVDGKVPRNEYG
NVYLFLPSMLPVGCVQLRLPNLNRLARKLDIDCAQAVTGFDFHGGYSHAVTDGYVVCEEY
KEVLIAAWENEQAEIEKKEKEKREKRALGNWKLLTKGLLIRERLKQRYSIKTEPPAPETE
KGAGFSSDEEGPNSGTAGGDVEISWPRNRQAEQQKEKTTRKSKREKKEEAAQLFPFEKL
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaagcgcaaatcgtccgtcgtccgggagcctgccggcaaaaggcggcagggg
gaggcgggagcgcggcgggaacgcgaggaggaacgcgaggaggaacgcgaggagggtgat
tttgtagaggaaaaacccagcgtaaagaagagcagagccggagttgcagctgggaagaag
gacgatggtgatgctggagttgccaagtcagcagataagccttcaaaacaaaaacggcga
gcaaaagaaaatgagaaaagccctgaaaataaaaggacttgtcacaaagagcaaacgtgc
agtgactcactgaaggcccctcagaaggagataaaattgaagagagaatctccaattaaa
aaagagatggatgaagacaatactgatgatgatgatgaaagtgaagatgaatgggaggac
gtggaggaactccaggagcctgtcatagataagttagaagaaggtgctgttcttccagca
gcggtgctgccaagcaaccctgttgagatagagattgaaaccccagaacaacttaagaga
agagagagaagagagaaaaggaaagctgagtttgagacttatgttcggagaatgattaaa
cgtttcactaaggaagttcgtgaggacacacataaggttcacctcttgtgtttattagca
aatggtttctataggaacaggatctgcagccagccagatcttcatgccattggtctatcc
atcatccccatacacttcacaaaagttcctgcaggccaagtggaccttctctacatttcc
aacttggtgaaatggtttgttggaaccttcactgtcaatgatgaactttccagtgaaaaa
ggagagccccttcagtcgaccttggagaggcgctttgccatctatgctgcacgagatgat
gaagagttggttcatatatttttaattattctcagggcgttgcagctgctgtgtcgcctg
gtgctgtccttacagcccattcctctcaaggagatgaaggcaaaggaaaaaagcacatcc
aagaagcagtcgctcagcagtacctctgaggggcaggagagctcaggcacaacacccaaa
gttgtggcaaaaaaatgcccttgcaaaaaagccaaacgggatgagaaatcatcagggagt
gaagaagacaatgaggagtcaaagaaaacaaaaagtgctcagaccaaaaggacgcacaag
tcaaaattgacaacaggcaataaggaacagaaggaaactggaaatgaggacagtggttta
ggggaaaaagatgtgccggtcagacccaagaacagtcggcggagacgtgtggcctccaaa
gtgtgttacaaagaagagagtggaagtgatgagggcagtgtttctgactttgagatttca
ggagaggaaagtgatatctccgatgaggactttgaaactgtctctaaaaagtggagaagc
tcacgaggtgcccagaaatcaaaggcaatgactataaaaagccccaaaagtgagacttcg
gaatcaaggctatccagaaattctttgggagctgagccaagaccagcaaaaagcacagct
ccaaccttgcctcaggcacagagaaagagaaacaaaataatttccagtgatgaggatgat
gggcagcagatggtacagaaagtggttggcacagaccagtggctagaggttttccttgaa
cgtgaggacaggtgggtgtgtgtagactgtgtgcatggcattgttggccagccccagcag
tgcttcacgtacgccacaaagccactctcctatattgtgggatttgacaatgatgggagt
gtcaaggatgtgacacaaagatacgacccagtgtggatgaccacgacaaggaagaaacgt
gtggaccctgagtggtgggaagacacactgcagccatataaaagtccctttgcagacaga
gacaagaaggaggaaacggagtttcaggttaagcttcaagatcagcctctaccaacagca
attggagagtacaaaaaccaccctctgtatgcactgaagaggcatctcttgaaatatcag
gccatctatcctgagtcagctgctatcctagggtactgcaggggagaggctgtttattcg
agagactgtgtacacacgctccactccaaggacacttggcttaagcaggctcgagtggtg
aggattggagaagtgccttacaaaatggtgaagggctattccaaccaggccaggaaggca
cgccttgcagagcctgcaaaccgggacaaagcggacctggcgctgtttggtcgctggcag
acagaggagtatcagccacccatagcagtggatggaaaggttcctcggaatgaatatgga
aacgtctatctgttcctgccctctatgttacctgttggttgtgtgcagcttaggctcccc
aacctgaacagattggcacggaagttggacattgactgtgctcaagctgtcactggattt
gacttccatggtggctactcacacgcagttactgatggctatgttgtctgtgaagaatat
aaagaggtgctgattgctgcctgggagaatgaacaagcagaaatagaaaagaaggagaag
gagaagcgtgagaagagagctctgggaaactggaagttgctgacaaaagggcttctcatt
agagagagactgaagcagcgctactccatcaagactgagccaccagcacctgagacagag
aaaggagcaggattctcctctgatgaagaaggcccaaattcagggactgccggaggagat
gtggaaatttcttggccccgaaatcgccaggcagagcagcagaaagagaagacaaccaga
aaaagcaagcgagaaaagaaggaagaagcagcacagttgtttccttttgagaaactgtaa
DBGET
integrated database retrieval system
