Tympanuchus pallidicinctus (lesser prairie-chicken): 128078770
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Entry
128078770 CDS
T08967
Symbol
RRP9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
KO
K14793
ribosomal RNA-processing protein 9
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpai03009
]
128078770 (RRP9)
Ribosome biogenesis [BR:
tpai03009
]
Eukaryotic type
90S particles
Other 90S particles
128078770 (RRP9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
Beta-prop_DCAF12
Beta-prop_HPS5
ANAPC4_WD40
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
WDR54
Motif
Other DBs
NCBI-GeneID:
128078770
NCBI-ProteinID:
XP_052535294
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MAATGRRARAARGVAAGRRRRPRVEGPGAEGKPRPAPLRSRDEEVSSEEEAESAAAGRRR
EEAAAEEELEETPQEKKLRLAKLYLEELRRHEEERAEEEEEEAAGFPGDLVGERLKEAVL
EQQGRLRRPAAQDVCPPAAAAIRVLRGHQHSVTCLVVSPDDKFIFSAAKDGSVIKWEVES
GKRLCVVPGGKKGTEGQPMGHTAHVLCIAISSDGKYLATGDRSKLILIWEAATCKRLYTF
TGHRDAVSGLSFRKGTYQLYSASHDRSVKVWNVEENAYVETLFGHQDIITGMDSLSRECC
VTSGGRDGTVRFWKIPEESQLIFYGHQGSIDCIQLINEEHMVSGADDGSVALWGLAKKKP
LALVRQSHGTQGAAQDLQQPYWVSAVAALLNSDLVATGSHSGCVKLWKCGEGFQKLEPLC
DIPLIGFVNSLKFSSTGDFLVAGIGQEHRLGRWWRVKEAKNSICIIPLKCRAGAPGPPAA
DCA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacgggacggcgggcgagagcggcgcgcggggtcgcggcggggcggcgccgg
cggccgcgggtggagggcccgggcgccgaagggaagccccggccggcaccgctccggagc
cgcgacgaggaggtgtccagcgaagaggaggcggagagtgcggcggcggggcggcggcgg
gaggaggcggcggccgaggaggagctggaggagacgccgcaggagaagaagctgcgcctg
gccaagctgtacctggaggagctgcggcggcacgaggaggagcgggcggaggaggaggag
gaggaagccgcgggtttccctggggatctcgtcggcgagcgcctgaaggaggccgtgctc
gagcagcagggccggctgcgacgccccgcggcccaggacgtgtgccctccggccgctgcc
gccatccgagtgctgcggggccaccagcattctgtcacctgcctcgtcgtctctccggat
gacaagttcatcttttcggctgctaaggatggctccgtcatcaaatgggaagtggagagt
gggaagagactctgcgtggtgcctgggggcaagaaaggcacagaggggcagcccatgggg
cacacggcccacgttctctgcattgccatctcatcggacggcaaatacctggctacagga
gacaggagcaagctgattctgatctgggaggcagccacctgcaagcgtctttatacgttc
actggtcatcgtgatgccgtgtcgggcctgtctttccggaagggcacgtaccagctgtac
agtgcatcccatgaccgctccgtcaaggtctggaatgtggaggagaatgcttatgtggag
accctctttgggcaccaggacatcatcacagggatggacagcctgagtcgggagtgctgt
gttacctcagggggacgagatggcactgtgcgtttctggaagatccccgaggagtcacag
ctcattttctatgggcatcagggctccatcgattgcatccagctcatcaatgaggagcac
atggtgtcaggtgctgatgatgggtcagtggccctgtgggggctggcgaagaagaagcca
ctggcactggtgaggcagtcgcacgggacgcagggcgctgcccaggacctgcagcagccg
tactgggtatctgcagtggccgccttgctcaacagtgaccttgtggctacaggttcccac
agtggctgtgtgaagttgtggaagtgcggcgagggatttcagaagctggagcccctctgt
gatatcccattgattggctttgtcaacagcctgaagttctcgtcaacgggagacttcctg
gtggctggcattgggcaggagcaccggttgggccgatggtggagagtaaaagaagccaag
aactccatctgcatcattcctcttaaatgtagagcgggagcccctggtcccccggcagct
gattgcgcgtag
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integrated database retrieval system
