Tympanuchus pallidicinctus (lesser prairie-chicken): 128078844
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Entry
128078844 CDS
T08967
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03015
mRNA surveillance pathway
tpai05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128078844 (CPSF4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
128078844 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpai03021
]
128078844 (CPSF4)
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128078844 (CPSF4)
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128078844 (CPSF4)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128078844 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-C3H1
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
128078844
NCBI-ProteinID:
XP_052535398
LinkDB
All DBs
Position
Unknown
AA seq
255 aa
AA seq
DB search
MQECKFLKPKCYFSFEFEGLIISSGRKYFESSYKSLLTFIIFLLSAESGAAVCEFFLKAA
CGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNK
ECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPTCKFMHPR
FELPMGTTEQPPLPQPAQTQQKRTPQVIGVMQSQNNNTGNRGPRPLEQVTCYKCGEKGHY
ANRCTKGHLAFLSGQ
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaatgtaaatttcttaaaccaaaatgctatttctcttttgaatttgagggcttg
ataatttcttcaggaagaaaatacttcgaaagctcctacaaaagtttgttaacatttatt
atctttcttctctccgcagaatcaggtgcagctgtctgtgaattttttttaaaggcggca
tgtgggaaaggaggtatgtgcccattcagacacatcagtggggaaaagactgttgtttgc
aaacactggctacgaggactatgcaaaaagggagaccagtgcgagtttctgcacgagtat
gacatgaccaagatgcctgagtgttacttctactccaaatttggggaatgcagtaacaaa
gaatgtccattcttgcacattgacccggaatctaagatcaaagactgtccctggtatgac
agaggcttctgtaaacacggtccactctgcagacaccggcacactcgaagagtcatttgt
gtgaattacctagtaggattctgtccagaagggcctacctgtaaattcatgcaccctcga
tttgaactacctatgggaaccacagagcaaccaccactgcctcagccagcacaaacacag
caaaagaggacaccccaagttattggagtcatgcaatctcaaaataacaacactgggaac
agaggaccccggccattggagcaggtcacctgttacaagtgtggtgaaaaaggtcattat
gccaacagatgcaccaaaggacatctggcctttctcagtggacagtga
DBGET
integrated database retrieval system
