Tympanuchus pallidicinctus (lesser prairie-chicken): 128078859
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Entry
128078859 CDS
T08967
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03420
Nucleotide excision repair
tpai03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
128078859 (ERCC4)
03460 Fanconi anemia pathway
128078859 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpai03032
]
128078859 (ERCC4)
03400 DNA repair and recombination proteins [BR:
tpai03400
]
128078859 (ERCC4)
DNA replication proteins [BR:
tpai03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
128078859 (ERCC4)
DNA repair and recombination proteins [BR:
tpai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
128078859 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
DUF4110
Motif
Other DBs
NCBI-GeneID:
128078859
NCBI-ProteinID:
XP_052535450
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MAALLEHESQIFLDLFHQDGLVVCARGLGIDRLLLRFLRLYCEPASLVLVLNTSAAEEEY
FIDQLRSDGVVHLPRRVTNEIPSSARYEFYTQGGVLFATSRILVVDFLTDRIPANLITGV
LVYKAHRIIESCQESFILRLYRQKNKEGFIKAFTDNAVAFNTGFCQVERVMRNLFVRKLY
QVWPRFHIAVNSFLEKHKPEVVEIHVSMTPSMLAIQTSILDILNACLRELKRYNPALEVE
DLSLENALGKAFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLTQYDCVTFLNLL
ESLKASEKAFGENSGWLFLDSSTSMFVNARARVYRIADEKMNQKGKVSENRDVKKENELK
RELVLESNPKWEALREVLNEIENENKNSEDLGGPGQVLICASDDRACAQLREYITDGAEA
FLMRLYNKTLGKDEKAGEVWIKDRKVVKSKGNARPDMGPQAKKAKLPTCSKQNKHKKQHD
QTIVQMMGKTEEENREELDVEDNKELNGSQEGSVEETIPEDFPVNLPSDSYYGIFKNPLT
IIHPLQGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYFLIYGS
STEEQRYLTALRKEKEAFEKLIRERASMVVPEEREGRDETNLDLVRDVKPASASTDTRKA
GGQAQTSAQQTVIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSISDL
IGSLNNGRLYTQCISMSRYYKRPILLIEFDPNKPFSLIPQGSLRQEISSSDVTSKLTLLT
LHFPKLRILWCPSPHATAELFEELKQNRPQPDAETAMAVTADSETLPESDKYNPGPQDFL
LKMPGVNAKNCHALMNHVKSIAELVTLPKDKLCEILGNAANATQLFDFIHMTYKEAISKE
KNKR
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctggagcacgagagccagatcttcctggacctgttccatcaggacggg
ctcgtggtctgcgcccgcgggctcggcatcgatcgcttgctgctgcgcttcctccgcctt
tactgcgagcccgccagcctggtgctggtgctgaacacgagcgccgccgaggaggagtac
ttcattgaccagctgcggtcggatggagttgtgcaccttcctcggcgcgtcaccaacgag
atccccagcagtgcccgctatgagttctacacgcaagggggggttctctttgcaaccagc
agaatcctcgtggtcgacttccttaccgacagaattcctgcaaacctcatcactggtgtc
ttggtatacaaagcacatagaatcattgaatcttgtcaggaatcatttatactgcgactt
tatcgccaaaaaaacaaggaaggcttcattaaagcttttacagataatgcggttgcattt
aacactggtttttgccaagtggaaagagtgatgagaaacctttttgtcaggaaactttac
caagtttggccaagatttcatatagcagtgaactcatttttagagaagcataaacctgaa
gtggtggaaatacacgtgtcaatgacccctagtatgcttgctatccagacctcaatcctg
gacattttgaatgcgtgtctgagagaactgaagcgttacaatccagctcttgaagtagaa
gatctatctttagaaaatgctcttggtaaagcttttgacaagacaattcgtcactattta
gatcctctttggcatcagctcggagctaagacaaaatctttggtccaggatttgaagatt
ctgcgtactttgctacagtatctaactcagtatgattgtgtcactttccttaatcttctg
gagtcactgaaagcaagtgaaaaagcttttggtgagaattcaggttggctgtttcttgac
tccagtacttccatgtttgtaaatgctcgagccagagtttatcgcattgcagatgagaaa
atgaatcagaaaggcaaagtctctgaaaacagagatgtaaagaaggaaaatgaactgaaa
agggaattggttctagaaagtaacccaaaatgggaagctttgagagaggtattgaatgag
attgaaaatgagaataagaacagtgaagacctcggtggtccagggcaagttcttatttgt
gccagtgatgaccgagcttgtgcacagctcagggaatacataactgatggggcagaagcc
tttttaatgagactgtataataaaacacttggaaaggatgagaaagctggagaagtgtgg
attaaggacagaaaagtggtcaagtccaaaggaaatgccagaccagacatgggacctcaa
gccaaaaaagccaaactccctacttgttcaaaacaaaacaaacacaaaaagcagcatgac
caaactatagtccaaatgatggggaaaactgaggaggaaaacagagaggagttggatgtg
gaggacaacaaggaattaaatggaagccaagaaggcagtgttgaagagaccattcctgaa
gatttccctgtgaacttaccctcagattcttactatggtattttcaaaaacccactcaca
attattcatccgctgcagggctgcagtgatccctatgctctcactcgagtgctgcatgaa
gtagagccaagatatgttgtactgtatgatgcagaactaacttttgttcggcagctggaa
atctacaaggcaagcagacccgggaagcctctgagggtttatttcctcatctatggaagc
tcaacagaagaacagcgctatctcacagccctgagaaaagagaaggaggcctttgaaaaa
ctaattcgagaaagggccagtatggttgttcctgaagaaagagaaggaagagatgagaca
aacctagacctagtaagagatgttaagcctgcctctgcttccactgacacacgcaaagca
ggtggacaggcacagacatctgcccaacagactgtaatagtggacatgcgggaatttcgt
agtgagcttccttcgctgattcatcgtcgtggcattgacattgagcctgttactttggaa
gttggagattacattttaactcctgatatctgtgtcgagcggaaaagtatcagcgatctc
attggttccttaaataatggaagattgtacacgcagtgcatttctatgtcacgttactat
aagcggccaattcttctgattgaattcgatcctaacaaacctttctccttgattccacaa
gggtccctgcgccaggagatttccagtagtgatgttacttctaaactgacccttctcaca
ctccatttccccaagttacgtatcctgtggtgcccctcaccccacgctactgctgaactg
tttgaagagttaaaacaaaaccgcccacagcctgacgcagaaactgcaatggcggtcaca
gcagattctgaaactcttcctgagtcagacaagtataaccctggtcctcaggacttccta
ttaaaaatgccaggtgttaatgcaaaaaactgccacgccttaatgaaccatgtgaaaagc
attgctgagctggtgacgctgccaaaggacaaactctgtgaaattttgggcaatgctgcc
aatgccacacaactctttgactttattcacatgacctacaaggaggcaatatctaaagaa
aaaaacaaaagatga
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