Tympanuchus pallidicinctus (lesser prairie-chicken): 128078876
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Entry
128078876 CDS
T08967
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128078876 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128078876 (GSPT1)
03012 Translation factors [BR:
tpai03012
]
128078876 (GSPT1)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
128078876 (GSPT1)
Translation factors [BR:
tpai03012
]
Eukaryotic type
Release factors
128078876 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
CTLH_Armc9
Motif
Other DBs
NCBI-GeneID:
128078876
NCBI-ProteinID:
XP_052535465
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MEANGSGSGSSSDSAPDCWDQADIETGSGASPGSAPPAAEAEAQQELLGAAFSRQLNVNA
KPFVPNVHAAEFVPSFLRGAPAPGLPPPSPPPGLPPPHGLPVETSPEEQTASCEGSNAAV
NMEISESVVENGETEMSPEESWDHKEETSEAEQGSGPVVDAGPSEEGTQEMMEEEEEIPK
PKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRE
TWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLA
VLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKE
KLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSEFCPWYIGLPFIPYLDNLPNFNRSAD
GPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDSVAPG
ENLKIRLKGIEEEEILPGFILCDSNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTC
IEEVEITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTL
RDEGKTIAIGKVLKLVPEKD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaacgggagcggcagcgggagcagtagcgactcggcccctgactgctgggat
caggcggacatcgagacgggcagcggcgccagcccgggttccgccccgccggccgcggag
gccgaggcccagcaggagctgcttggggcggcgttcagccggcaactgaacgtcaacgct
aaacccttcgtgcccaatgtccacgctgccgagttcgtgccgtccttcctcagaggggca
ccggcgcccggcctgccgccaccgtcgcccccgcccggcctgccgccgccccacggttta
cctgtagagacttctccagaagagcagacggcctcctgtgaaggttcaaatgctgctgtt
aacatggaaatttcagaatctgttgtggaaaatggagagacagagatgtccccagaagag
tcatgggatcataaagaagaaacaagtgaagcagaacaaggaagtggtccagtagtggat
gcaggaccttcagaagaaggcactcaggaaatgatggaagaggaggaggaaataccaaaa
ccgaaatctgtggtagcaccaccaggtgctcctaaaaaagagcacgtaaatgtagtattc
attgggcatgtcgatgctggcaagtcaactattggaggacaaataatgtatttgacagga
atggttgataaaagaacacttgaaaaatatgaaagagaagctaaagaaaaaaacagagaa
acctggtacctttcatgggccctagacacaaaccaagaagaacgtgacaaaggtaaaaca
gtggaagtaggtcgtgcctactttgaaactgagaagaaacacttcactattctagatgct
cctgggcataagagctttgttccaaatatgattggtggagcttctcaagctgatcttgca
gtgctggttatttcggcaagaaaaggagagtttgaaactggatttgaaaaaggtggacag
acgagagaacatgccatgttagcaaaaacagcaggtgtaaaacatttaatagttcttatt
aataaaatggatgatccaactgtaaactggagtaatgaaagatacgaggaatgtaaagag
aaactggttccatttttgaagaaagttggctttaatcccaagaaagatattcatttcatg
ccctgctcaggactcactggagcaaatcttaaggaacagtctgaattctgtccttggtac
attggattaccatttattccatatctggataacttgccaaacttcaaccgttcagctgat
ggaccaatcaggctgccaattgtggataaatataaggatatgggcactgtggtccttgga
aagctggaatcaggctcaatttgcaaaggacaacagcttgtgatgatgccaaacaagcac
aacgtggaagttcttggaatcctttctgatgatgtagaaactgattcagtagccccaggt
gaaaatttaaagatcagactgaagggaattgaagaggaagagatcctgccaggatttatt
ctctgtgattccaacaacctgtgtcattctggacgcacgtttgatgcccagatagtgata
attgagcacaaatccattatctgcccaggttacaatgctgtgctgcacatccacacctgt
atcgaagaagttgagataacagccttaatctgcttggtggacaaaaaaacaggagaaaaa
agtaagacacggcctcgctttgtgaagcaagatcaagtatgcattgctcgtttaaggaca
gcaggaaccatctgccttgagacattcaaagatttccctcagatgggtcgctttacctta
agagatgagggtaagaccattgcaattggaaaagttctgaaactggttccagagaaggac
taa
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