Tympanuchus pallidicinctus (lesser prairie-chicken): 128078913
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Entry
128078913 CDS
T08967
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128078913 (RBBP6)
Enzymes [BR:
tpai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128078913 (RBBP6)
Ubiquitin system [BR:
tpai04121
]
Ubiquitin ligases (E3)
U-box type E3
128078913 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
128078913
NCBI-ProteinID:
XP_052535592
LinkDB
All DBs
Position
Unknown
AA seq
1961 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKRQIMAREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKMVETPFRSRTEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKIQQQQQQPPPPPP
PPPPLMRQTITRNLQPLMRPAISRQQDPLMIPLASLSSHSAAALAPGQSVAAALPVNPSS
VLVSDLPPAVSLSLRGEKPDGPFRDPDIIPPAALVTAAELSKSSSLAISSLLEEKFAFIH
KGYQVPVLRQPAIPSLLGPQGQSIPTTGHPMRIGAIRSAGGRPGWELSSNRGRPHSERSQ
RTQAPTLPASAPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYPVPPP
GYPPAPANMSSAWVPTAVPTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFT
NDFAKELMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRS
HSRSYSRSPPYPRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTK
RTIPQGEGEREYFNRYREVPPYDMKAYYGRSIDFRDPFEKERYREWERNYREWYEKFYKD
YAVGAQPRPPVNRENFSPDRFGPPGTRRENSPYSRGRREDYAGGQSHRNRNIAGNFPEKL
SGREGHGLKDPAKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFPNAELLESTKKTRE
PGTAEDIKSDSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKDKDKPKAKTDKTKRK
AEVAAPPKKDNVTKPAKASQEKVDTDREKSPRMEPLVKKAKEELPKTDSVKASSSQKDEK
ALGTPRKVHPKVAKDHPEARPAKEEKAKKDHPKELKSEKPSSKEDKSKKAVEKSKSSDAK
TEKRKRKADEKADKEHEAASGKAPKPETAESKTSPKGKSEPDGEKGERTPEKDKSGFLIT
PAKKIKLNRETGKKIVSGENVPPVKEPVEKVEASSSKVKQEKVKGKVRRKVTAADGSSST
LVDYTSTSSTGGSPVRKPEEKTDTKRTVIKTMEEYNNDITAPAEDVIIMIQVPQSKWDKD
DFESEEEDVKSTQPSSNIGKPASVVKNVSAKPPNPIKHNEKEMESLEKIQKATKEVSYES
SQHDVKGSKSSVLNEKGKTKERDHSLSDKDTSEKRKSSVQPEKDHSERATEQGNGKNISQ
SSKDSRSSEKHDAGRGSTAKDFTPNRDKKSDHDGSREHSSSKRRDEKSELARRKDSPSRN
RESTSGQKSKPRDERAEPSKKGAGDSKRSSYSPSRDRKQSDHKTAHDSKRSLEEHKPLDK
NSGKEKEKEKEREKEKEKEKEKEKEKEKEKEKEREKEKEREREKEKDKEKEREKDKEKEK
DKEKEREKEKEKEKEREKDKEREKEREREKEKEREKEKEKEREKEREKEKEKEKEREKER
EKEKEREREKEKEKEREKEKEREKEKEREKEKEKEKEREKEKEKEKEREKEREKEKEDKD
KYIAEIKSNKEKEPSCNKPSSVQESPDAKNEKENGTGQNDKTGVKSKPQVSNPSRLSADP
TRETDEAAFVPDYNESDSESNVSAKEEETVGKNSKEQKEKAVDKVKQETAAPAMVSQPEA
SRSQSQSSPSVSRSRSQSPAESQTRSHSSSASSGESQDSKKKKKKKEKKKHKKHKKHKKH
KKHAENEPELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTI
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtccattacaagttctcctccaagctgaactatgacaccgtcaccttcgac
ggcctccacatctccctgtgcgacctcaagcgccagatcatggcccgggagaagctgaag
gcggctgactgcgatctgcagatcaccaacgcccagaccaaagaagaatacacagatgat
aatgctctgattcccaagaattcatctgtaattgttagaagaattcctattggtggagta
aaagctacaagcaaaacatatgttatgactcctaaatcgcacaaaatggtagaaactcct
ttcagaagtcgaactgaaccagtgagtggaacatcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttacgaagactgccaatctggctgaagccaatgcttccgaa
gaagataaaataaaagctatgatgtcacagtctggccatgaatatgatccgatcaattac
atgaagaaaccgttgggtccacctccaccatcatacacttgctttcgttgtggaaaacct
ggtcactatataaagaactgcccaacaaatggggacaaaaattttgagtcagtacccagg
attaaaaagagcacaggaattcccaggagtttcatgatggaggtgaaagatcccaataca
aagggtgctatgctgacaaacactggaaaatatgctataccaactattgatgcggaagct
tatgctataggaaagaaggaaaagcctcctttcttgccagaagagccatcctcctcctca
gaagaggatgatcctattccagatgagttgttatgtctgatttgtaaagatataatgaca
gatgcagttgttattccctgctgtggaaacagttactgtgatgaatgtatcagaacggca
ttattggaatctgaggaacatacctgcccaacatgtcatcaaacagatgtgtctccagat
gctttgatcgccaacaagttcttacgccaggctgtgaacaacttcaaaaatgaaactggc
tacacaaaaaggctccgtaagattcagcagcaacagcagcagccaccaccgccacctccg
cctccaccaccgctaatgagacaaaccataacacgcaacctgcagcccctaatgaggcca
gcaatttccagacagcaggatccactgatgattccgttagcttctctgtcttctcactct
gctgctgccttggcccctggtcagtctgttgcagctgcactaccagtaaatccatcttct
gtcctcgtctccgatctgcctccagcagtgtctctgtctctccgcggtgaaaagccagat
ggaccttttcgtgatccagatattatacctcctgctgctctggtgacagctgctgagctt
tctaaatcttcctctttggcaatcagcagtttgttggaagagaagtttgcgtttattcac
aagggctatcaggttcctgtactaaggcaaccagcaatacctagtcttctgggcccacaa
ggacaatcaattcccacaactggtcatccaatgagaattggtgcaattcgctcagctggt
ggcaggccaggttgggaactaagttcaaatcgaggacgcccgcatagtgaacgttcccaa
aggactcaggccccaacactaccagcatcagcaccagtctttgtgcctgtgcctccacct
cccttgtatcctccacctccccatgcacttcctcttccaccgggggtaccgccaccacag
tttcctcctcagtttccacctggtcagcctccatcagctgggtaccctgttccccctcca
ggatatcccccagctcctgcaaacatgtcatcagcttgggtaccaacagcagtaccaacg
gctcattcaaataccatcccaacgacacaagcacctcctttatctagggaggagttttac
agagaacaacggagacttaaagaggaggaaaagaaaaagtccaaacttgatgagtttaca
aatgattttgctaaggaattgatggaatataaaaagattcaaaaggagcgtaggcgttcg
ttttccaggtccaagtctccctatagcgcttcgtcctactcgagaagctcctacacctac
tccaagtcgcggtcgggctcctcgcgctcccgttcctactcgcggtcattcagtcgttcc
cattctcgttcctactcacgttcacctccatacccaagaagaggcaaagggaagagtcgt
aactatcgctctaggtcaaggtcacacggttatcaccgttcaaggtcaaggtcacccccg
tacagaagataccattcacggtccaggtctccagtgtttaggggccagtctcccactaag
cggactatacctcaaggggaaggagaaagggagtattttaacagatacagagaagttcca
ccatacgatatgaaagcttactatggcagatctatcgactttagagatccgtttgagaag
gaaagatacagagaatgggaacggaactacagagaatggtatgaaaagttctacaaggac
tatgctgtcggagcccaacctcgacctccagtaaacagagagaacttttctccagataga
tttggtccacctggaaccagaagagaaaattcgccatactctcggggacgtagggaggat
tatgctggtgggcagagccatagaaatcgtaacatagccggaaatttccctgaaaagctt
tcaggaagagagggccatggtctaaaagatcctgccaaatcaaaagagaaggaggtggaa
aatcccctgggagatggcaaaggaaataaacataaaaaacacaggaagaggagaaaaggg
gatgagaatgaaggatttcccaatgctgagttgttagaaagtacgaaaaaaaccagggaa
ccaggcacagcagaggacattaagtcagactcgctgttcatgctcccgagtagagatgat
gccacccctgtgagagatgaacctatggaagcagattctatagctttcaaaccggtgtct
gaaaaagagaaaaaggacaaggataagccaaaagcaaagactgataagacaaaacggaaa
gcagaagtggctgctcccccaaagaaagacaatgtaacaaaaccagctaaagcttcccaa
gagaaggtggacaccgatcgtgaaaaatctcctcgaatggaacctcttgtgaaaaaagca
aaggaggagctgccaaagacagacagtgttaaggcatcttcctcccaaaaggatgagaag
gctctcggtacaccacggaaagttcatccaaaagtggcaaaagatcacccagaagccagg
ccagccaaggaagagaaggcaaagaaggaccatccaaaagaattaaagtcagaaaagccc
tccagcaaagaggacaagtcaaaaaaagcagttgaaaaaagcaaatcttctgatgcaaaa
actgaaaaaagaaaaaggaaagcagatgaaaaggctgataaagaacacgaggcagcttct
ggaaaggcccctaaaccagaaactgctgaatcaaaaacatcgccaaaagggaagagtgaa
cctgatggtgagaaaggagagagaactccagaaaaagataaatctggttttctcatcact
cctgcaaaaaagattaaacttaaccgagaaactggcaaaaagattgtgagtggagagaat
gtgcctcccgtgaaagaacctgttgagaaagttgaggcaagcagcagcaaagttaaacaa
gaaaaagtgaaaggaaaagtgagaagaaaggtaacagcagctgatggatccagttcaact
cttgtagattataccagcaccagctctactggaggaagccctgttagaaagcctgaagaa
aagacagatacaaagcggactgtcattaagacaatggaggaatataataatgatataact
gctcctgctgaagatgtcattattatgatccaggtccctcagtcaaagtgggataaagat
gactttgagtctgaagaggaagacgttaagtctacccagccatcttcaaacataggaaaa
cctgctagtgttgtaaaaaatgtgagtgctaagccaccaaatcccataaaacacaatgag
aaagaaatggagtctttggagaaaatacagaaagctacaaaagaggtgagttatgaaagc
tctcagcatgatgtaaaaggttcaaaaagttcagtgttgaatgaaaaagggaaaaccaaa
gagcgggatcattctctgtcagacaaggacacttctgaaaagaggaagagcagtgttcag
ccagaaaaagaccactcagaacgtgccactgaacaaggaaatgggaaaaatatttctcaa
tcttccaaggacagcagatcttcagagaaacacgatgctggccgtggatccactgctaag
gattttactcctaatcgagacaaaaagtctgaccatgatggcagcagggagcactccagt
tccaagcgcagagatgagaaaagtgaattagcaaggagaaaagactctccttcccgaaac
agagaatctacgtcaggacaaaaaagtaaaccaagggatgaacgagcagagccctccaaa
aagggggccggagattccaaaagaagcagctacagcccttcacgtgacagaaagcagtca
gatcacaaaactgctcatgattccaagcgttcattagaggaacacaaacctctagataaa
aattcaggtaaggagaaggaaaaagaaaaggagagggaaaaggagaaggaaaaagaaaaa
gagaaggaaaaggagaaggaaaaagaaaaggaaaaggagagggagaaggaaaaggagagg
gagagggagaaggaaaaggacaaagaaaaggagagggaaaaagacaaggagaaggaaaag
gacaaagaaaaggagagggaaaaagaaaaggagaaggaaaaggagagagaaaaagacaag
gagagggaaaaggaaagggagagagaaaaagaaaaggagagggagaaagagaaggagaag
gagagggaaaaggagagggagaaggaaaaagagaaggagaaagagagggaaaaggagagg
gagaaagaaaaagaaagggagagggagaaggaaaaagaaaaagagagggaaaaggaaaag
gagagggaaaaggaaaaggagagagaaaaggagaaggaaaaagaaaaggagagggagaag
gagaaggaaaaagaaaaggagagggaaaaggagagggaaaaggagaaggaggacaaggac
aagtacatagctgagataaagagcaataaagagaaagagccaagttgcaataagccatct
tcagtacaagaatcaccagatgcaaaaaatgagaaagaaaatgggactggacaaaatgat
aagactggtgtcaagagtaagcctcaggtaagcaacccctcacggctctctgctgatcca
actcgagaaactgatgaggctgcttttgtaccagactacaacgaaagtgacagtgaaagt
aacgtgtctgcaaaagaagaggaaactgttggaaaaaattctaaagaacagaaggaaaaa
gctgttgacaaggtcaaacaggagacagcagctcctgccatggttagccagcctgaagca
agcagaagtcaaagccagagcagccccagtgtgagccgcagccgtagtcaaagccctgct
gagagtcagactcgaagccacagcagcagtgccagctcaggagaaagtcaagacagcaag
aagaagaagaagaagaaagagaaaaagaagcacaagaagcacaaaaaacacaagaagcat
aagaaacacgctgaaaacgagccggaattggagaaaagccaaaaacacaaacacaagaag
aaaaaatcgaagaagagcaaagataaagagaaagatgaccaaaaagttaaatctgtcacc
atatag
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integrated database retrieval system
