Tympanuchus pallidicinctus (lesser prairie-chicken): 128078918
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Entry
128078918 CDS
T08967
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04010
MAPK signaling pathway
tpai04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128078918 (CACNA1H)
04020 Calcium signaling pathway
128078918 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128078918 (CACNA1H)
Ion channels [BR:
tpai04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128078918 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
128078918
NCBI-ProteinID:
XP_052535609
LinkDB
All DBs
Position
Unknown
AA seq
2405 aa
AA seq
DB search
MQPGAADLAVNLGSFNASYWQCMCSLTPLLTWFEHVSMLVILLNCVTLGMFQPCEDVECQ
SERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNRLDFFIVMAGMMEYSLD
GHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGV
QLWAGLLRNRCFLDRNLATTYNLTFLHPYYRTDEAEENPFICSSHRENGMQKCSNIPTRK
EYKVECTLSMDSYTPSLYNPDSSSKNACINWNQYYNVCMAGDVNPHNGAINFDNIGYAWI
AIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRE
NQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTIRLYNNWQSKRRKK
VNPNNTTNGQSRRSKKRITSIHHLIHHHHHHHHHHYHISNGSPRGPRSNPEICDLELKVM
KPGGQLMLPSPSPNLQSPAPPPDSESVHSIYHADCHVEGPQVNCKSSNAPPSIKLTTGLS
NHGNMNYPTILPSPTSKASSVPVPKGKKNGNSPVAVVNSPVTLGTDSYGKLQQLVGEHGL
RRTPSRLSGLSVACPLPSPPGGTLSCELQDCPFCASLLEDPEFAFSESDSCDSDSNGIYE
FTQDLRHGDHRDQLQQQRGRRKRKKKKPKERNKVTRLWKAFGSKLKRIVESKYFNRGIMI
AILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFGLFGYIKNPYNIFD
GIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCML
LMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLY
NGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSANFDDD
FEKLKDLRATEMKMYSLAVTPNGHLEGRGSMPPPIIMRTAATPMPTPKCSPHMDSVHTFV
DSRRGSNASLDPLTYDQKSSSSLRSSPCANWGTNSNWGSRRSSWNSLGRAPSLKKKNQSG
ERESLLSGEGKGSTDDDSDDAKSSTVSRPSLHRRAESLDYRSSLDLPELLQLPPMRHSLS
ISPMAVLSAEYQDCNGKMVHVPSEFFLHIDGHKEEAVDYEDDMEDSYCYRIRKVLEPYKP
EWCKSHEDWSLYLFSPQNRFRVMCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDPHST
ERIFLSVSNYIFTAIFVVEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDIIVSM
ASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFII
FGILGVQLFKGKFYYCDGPDVKNITTKTDCTNAHYRWVRRKYNFDNLGQALMSLFVLSSK
DGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQ
HQEAEEARRREEKRLRRLEKKRRSKEMYLSEAQRRPYYADYSPARKYIHTLCTSHYLDLF
ITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFKDRWN
QLDLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTV
VQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLSRHATFTNFGMAFLTLF
RVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAVLMKH
LEESNKEAKEDAEMDAEIELEMSRGASTSATSGSRGGAVALESRAPCRSQEAMKSEPAVQ
AKHQALEALSCENVSVAIPDTLEGAETPMMEIPSFCSVSHHVLTPSHHPRGREAEGGMAS
PQPQDSQNLLTVRKISVSRMHSLPNDSYMFRPVMPAKAPFPLHEVEMETYPCKSQRGSIT
SIRSQPVGTCSSLRVPPESLHVAVRSPGREGWHRWKVLPPHVVPRSPALNKLLCRQEAVW
TDSVDGHPPDPKDNVQAEHGEMPPSPKDPQHTLTPSPLHLAASSLPCSPPRSPPTSPHRH
PSLTRKHSCSQQGVPSPTESPPRPQSCLLEPSDLADEEVRHINSSAKDWGEHSEAGSCST
SPFVSPAASPVPLKNCSTSSLAAGSSKERDLKKFYSIDTKGFLTKPSWADDQRRHSIEIC
PSVRDGDCGFEERAEEKPRSPAHIQPESEYIHGARRKKKMSPPCISIDPPMEDDGGAASR
TKPSENSMLRRRTPSCEFPAYREPLEPAEAQQGEPGCKAERRAQHLAIPGFSFEQSDGGG
SLSSLSDLLDSGRSTPDCELRKPEPLKTQRSNAEKSKELLSVAKSPVRMQDLVTVATEED
IDEPV
NT seq
7218 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctggggctgcagacttggcagtgaacctgggcagctttaatgcttcctattgg
caatgcatgtgttccttaacgcctcttctcacctggttcgagcacgtcagcatgctggtc
atccttctgaactgtgtcaccctgggcatgttccagccctgcgaggacgtggagtgccag
tcagagcgctgcaccatcctggaggcatttgacgacttcattttcgctttctttgcggtg
gagatggtcatcaagatggtggctctggggatcttcgggcagaagtgttaccttggagac
acgtggaatcgcctggacttcttcattgtgatggcaggcatgatggagtactctctggat
ggacacaacgtcagcctgtctgcaatccgcaccgtgcgcgtgctgcggccgctgcgagcc
attaacagggtcccaagtatgcgaatactcgtcaccctgctgttagatactctgcctatg
ttaggcaacgtcctcctcttgtgcttctttgtcttcttcatctttgggatcgttggtgtg
cagctctgggcagggctgctaagaaacagatgtttcctggacaggaatttggcaacgaca
tacaaccttaccttcctgcatccgtactaccgcacagacgaagcagaggagaatccattc
atctgctcatcccatcgtgagaacggcatgcagaaatgctccaacatcccaaccaggaag
gagtacaaggtggagtgcaccttgagcatggactcctacaccccaagtttatacaaccct
gactccagcagcaagaatgcctgcataaactggaaccaatattacaacgtatgcatggca
ggggatgtaaacccacacaatggagctatcaattttgataatattggctatgcctggata
gctatatttcaggttataaccctggaaggatgggttgacatcatgtactatgtgatggat
gcacattctttttacaattttatatattttatattgcttataatagttggttccttcttc
atgattaacttgtgcctggttgtgatagcaacacagttttctgaaacaaagcagcgggag
aaccagctgatgcaggagcagcgggcccgttatctctccaatgacagcacaattgccagc
ttctcagagccaggcagctgctacgaggagctgctgaagtacatctgccacatcttcagg
aaggtgaaacggcggacgatacgcctgtacaataactggcagagcaaacgcaggaaaaaa
gtcaacccaaacaacaccacaaacgggcagagccgccggagcaaaaagcgcatcacctcc
attcaccacctcatccaccaccaccaccaccaccatcaccaccactaccacatcagcaat
gggagcccgcgggggccgcgctccaacccggagatctgcgacctggaactcaaggtgatg
aagcctggtgggcagctgatgctcccttctccatcacccaacttgcagagccccgcgcct
cctccagactcggagtctgtgcatagcatttaccacgcagattgtcacgttgaaggacca
caagtgaactgtaagtcttccaatgcccctccaagcattaaactcactactggactctcc
aaccatggcaacatgaattatcctaccatcctgccttcaccaactagcaaagccagttct
gtcccagttcccaaaggaaagaagaatggcaattcacctgtggctgtagtcaatagccca
gtaactttgggcacggattcttatgggaagctgcagcagctggtaggagagcatggtctg
cggaggactcccagccggctgtcggggctgagcgtggcctgcccactgcccagcccgccg
ggcggcacgctgagctgcgagctgcaggactgccctttctgcgccagcctcctggaggac
cccgagttcgccttcagtgagtccgacagctgcgactccgacagcaacggcatctatgag
ttcacccaggacttgcggcacggtgaccacagggaccagctgcagcaacagcggggcagg
aggaagaggaagaaaaagaaacccaaggaaaggaacaaggtcacccgcctgtggaaggca
ttcggcagcaagctgaagaggatcgtggaaagcaagtacttcaaccgagggatcatgatc
gcgatcctcatcaacacgctgagcatgggcatcgagtaccacgagcagccagacgagctg
accaatgccttggagatcagtaacatcgtcttcacaagcatgttcgccctggagatgctc
ctgaaactccttgcctttggcctcttcggctacatcaagaacccgtacaacatctttgat
gggatcatagttgtcatcagtgtctgggagatcatcgggcagtcggacggcggtctttcc
gtgctccgaactttccggctgctccgggtgctgaagctggtgcgcttcatgcccgccctg
cgtcgccagctggtcgtcctcatgaagacaatggacaacgttgccaccttctgcatgttg
ctcatgctcttcatctttatcttcagcattctcggcatgcatctttttggatgcaagttc
agtctgaagactgatacaggagacacagttccagatagaaagaattttgattccttgctt
tgggccattgtgacagtatttcagatcctcactcaagaggactggaatgtggtcctgtac
aatggaatggcatcaacatcttcatgggcagcgctctactttgtggccctgatgaccttt
ggcaattacgtgctcttcaaccttctggttgccattctggtggaaggcttccaggcagag
ggggatgccaataggtcagacacagatgaggacaagacatctgccaactttgatgatgat
tttgagaagctgaaagacctccgtgcaacagagatgaagatgtattcacttgctgtcacc
ccgaatgggcacctggagggcaggggaagcatgccaccccctataatcatgcgcaccgct
gccacaccgatgcccactccgaagtgttccccacacatggactcagtgcacacttttgtg
gactcaaggagagggagtaatgcttctctagatcccctgacctacgaccagaagtcctcg
tccagcctccgcagttccccttgtgccaactggggtaccaacagcaactggggaagccgg
cgctcaagctggaacagcctgggcagagccccaagcctcaagaagaagaaccaatctggt
gaaagagagtctttgctctccggagaggggaaaggcagcacagatgatgactccgatgac
gccaagtccagcacggtcagcaggccctcactgcaccgccgggcagagtctttggattat
cgcagctccctagacctgcccgagctgctgcagctgccccccatgcgccattcgctcagt
atcagccccatggctgtgctgtctgctgagtaccaagactgcaatggcaagatggtgcac
gtccccagtgagttcttcctgcacatcgatggccataaggaagaggccgtggactatgag
gatgacatggaggatagttactgctaccggattcgtaaagtcctggagccctacaaacca
gagtggtgcaagagtcacgaggattggtccctctacttgttttccccacagaatcggttc
cgagtgatgtgccagaaggtcattgcccacaaaatgtttgatcatgtggtgctggtcttc
atatttctcaactgcattacaatagccctggagcgaccagacatagatccgcacagcacc
gagaggatattcctgagtgtttctaattacatcttcactgcaatctttgtggttgaaatg
atggttaaggtagtagctcttggctttttctctggggagaacacctatctacagagcagc
tggaacgtcctggatggagttttggtctttgtatctatcatagacattattgtctccatg
gcgtcagcaggaggagcaaagatcctgggtgtccttcgtgttttgagactgctgcggacc
ttgagacctctccgagtcatcagcagagccccaggtctgaagctggtggtagaaaccttg
atctcctccttgaggcctattggaaatattgttctcatctgctgtgctttcttcattatc
tttgggattttaggggtgcagctttttaaaggcaagttctactactgtgatggtcctgat
gtgaaaaacatcactacgaagaccgactgcaccaatgcacactacagatgggttcggcgg
aagtacaattttgacaatttgggacaggctctcatgtccttgtttgtcctttcctccaaa
gacggctgggtaaacatcatgtatgatggtctggatgctgtgggtattgaccaacagccc
atccagaaccataacccttggatgcttctctacttcatctccttcctgctcatcgtcagc
ttcttcgtgctcaacatgttcgtgggggtggtggtggagaacttccacaagtgccggcag
caccaggaggcagaggaggcccggcgtcgggaggagaagcgtctgagacgcctggagaaa
aagcgcaggagtaaggagatgtacctgtctgaagcccagcgcaggccttactacgctgac
tattctccagcacggaaatacattcacaccctctgcaccagccactatctcgacctcttc
atcaccttcatcattggagtcaacgtcatcactatgtcgatggagcactacaaccagcca
aagtctctggatgaagccctgaagtactgtaactacgtgttcaccatagtttttgtgttc
gaggcagtcctgaagttggtggcatttggttttcgaaggttctttaaggacagatggaat
cagctggatttggccatagttctcttatcaattgtgggaatcacgctggaggaaattgag
atgaatgctgcactgcccatcaatcccacaataatacgcatcatgcgggtgctgagaata
gcaagagtgctgaaactgcttaaaatggccaccggaatgcgagctctcctggacacagtg
gtacaagctcttccccaggtagggaaccttggcctactttttatgctcctgttttttatc
tatgctgccctgggagtggaattgtttggcaagctagactgcagtgaagagaatccttgc
gaagggctgagccggcacgcgacgttcaccaacttcgggatggccttcctcaccctcttc
agggtgtccacgggggacaactggaacggtatcatgaaggacactctccgggaatgcacc
cgggaagacaagcactgcctcagctacctgcctgttatttctcctgtctacttcgtcacc
ttcgtcctcatcgcacagttcgtcctggtcaacgtggtggtggctgtgctgatgaagcac
ttggaggagagcaacaaggaggccaaggaggatgctgagatggatgctgagatcgagctg
gagatgtctcgaggagcaagcacgtcagccaccagtggcagcaggggaggtgcagtggcc
ctggagagcagagcaccctgcagaagccaggaggccatgaagtccgagccagcagtgcag
gcgaagcaccaagccctggaggcgctgagctgtgagaacgtgtctgtagccatcccagac
acgctggagggggctgagactcccatgatggaaatcccgtccttctgctctgtttcccac
catgtcctgacaccttcccaccacccccgaggccgcgaggctgagggaggcatggccagc
ccgcagcctcaggattcccagaacctgctgacggtccgcaagatctccgtttcacgcatg
cactccttgcccaatgacagctacatgttccggcctgtgatgccagccaaagctcccttt
cccctccacgaggtggagatggagacgtatccctgcaagtcacagcgagggtccatcacc
tccatccgctcgcagcccgtggggacgtgctcctccctgagggtcccccccgagtccctc
catgtggctgtgcgctcccccggccgcgagggctggcaccgctggaaggtccttcccccg
cacgtcgtcccccggtctcctgctctcaacaagctgctgtgccggcaggaggccgtttgg
acagactctgtggacggacaccctccagaccctaaggacaacgtgcaagcagagcatgga
gagatgccaccatcaccaaaggaccctcagcacaccctcacccccagccctctccacctt
gcagcctcctccctgccgtgctcccctccacgctccccaccaacctcgccacaccggcac
ccatcgctgactcggaaacactcctgcagccagcagggggtccccagtcccaccgagagc
cccccaaggccccagagctgcctcctggagccctccgacctggctgacgaggaggttcgc
cacatcaacagctcagccaaagactggggggagcactcggaggccgggagctgctccaca
tcgccgttcgtctcgccggccgcatcgccggtgcccttgaagaattgcagcacaagcagc
ctggcagcaggcagcagcaaggagagggacttgaagaagttttacagcatcgatacgaag
ggcttcctcaccaagcccagctgggcggatgaccaaaggcggcactccatcgagatctgc
ccctccgtccgcgatggggactgcggcttcgaggagcgcgccgaggaaaagccgcgctcc
cccgcccacatccaaccggagtctgagtacatccatggagcccggaggaagaagaagatg
agcccgccctgcatttctatagatcctcccatggaggatgacggcggggcggcctcgcgc
accaaaccctccgagaacagcatgctgcgccgcaggaccccgtcctgcgagttcccggcg
taccgagagcccctggagccggcggaggcgcagcagggggagccgggctgcaaagcggag
cgccgtgcccagcacctcgccatccccggcttctccttcgagcagtcggatggcggcggc
tccctgagcagcctctcggatctgctggacagtgggcgatccacaccggactgcgaactg
agaaagccggagcccttaaaaactcaacggagcaacgccgagaaaagcaaagagctgctc
agcgtggccaagagccccgtccggatgcaggacttggtgactgttgcgacagaagaagac
atcgacgagcccgtatag
DBGET
integrated database retrieval system
