Tympanuchus pallidicinctus (lesser prairie-chicken): 128078990
Help
Entry
128078990 CDS
T08967
Symbol
CASKIN1
Name
(RefSeq) caskin-1
KO
K21952
CASK-interacting protein
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128078990 (CASKIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128078990 (CASKIN1)
Membrane trafficking [BR:
tpai04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
128078990 (CASKIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_5
Caskin-Pro-rich
Ank_4
Caskin1-CID
Caskin-tail
SAM_2
Ank_3
Ank_KRIT1
SH3_2
SAM_TNK
SH3_9
SH3_1
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
128078990
NCBI-ProteinID:
XP_052535737
LinkDB
All DBs
Position
Unknown
AA seq
1468 aa
AA seq
DB search
MGKDQELVQAVKAEDIAAVQKLLQRPKPGKAKLLGSAKRVNVNFQDTDGFSALHHAALNG
NTELISLLLEAQAAVDIKDNKGMRPLHYAAWQGKKEPMKMVLKAGSSVNIPSDEGQIPLH
LAAQHGHYDVSEMLLQHQSNPCIMDNSGKTPLDLACEFGRVGVVQLLLNSNMCAALLEPK
PGDTTDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINRQTKAGTALHEAALCGKTDVVRLL
LDSGINAHVRNTYNQTALDIVNQFTTSQASKEIKQMLRDASAALQVRAVKDYCNNYDLTS
LNVKAGDVITVLEQHADGRWKGCIHDNRTGNDRVGYFPSSLVEAISKRTGSRGADMSPSH
LSPSQGGSAAPAPTEEIWVLRKPFTGGDRSSLGSTGSVASARSSGSGQSTGSGAHALHAG
SEGVKLLATVLSQKASAQDAAVGDGPAKAQDIPAGSSRSQSVASSPYAPQPPAEQQLKKM
EPPSEGKSSEAVYQWLCKFQLQLYAPNFINAGYDITTISRMTPEDLTAIGVTKPGHRKKI
ASEINNLNIPEWLPEYKPANLALWLSMIGLSQYYKVLVENGYENIDFITDITWEDLQEIG
ITKLGHQKKLMLAVKKLAELQRAELGKYEPGTLKRKAAACPEVLAIESPPPEPPECQSPK
MTTFQDSELSSELQVAMTGEGPEETPEKPANPAAPGYRSPPALGGRARQMSSSQELLGDG
PRAPASTAISKSQEYLAEGAPEGPPVPPTKELRQPRHGHSVKRASVPPVPGKPRQAFPPT
AGHLTPPQTPGKPRPPSPQGPSAPHATAKVKPTPQLLPPGERPASPRSLPQSPTHRGFAY
VLPQPTDGEGAPPGVPVLPVSVPVLCLPPAGEGEEEPGRPKKRAHSLNRYATSDSEQERD
ELLVPDAGPYATVQRRVGRSHSVRAPAGGDKNVNRSQSFAIRPKKKGPPPPPPKRSSSAI
SSAGMAEDFPKDGEGEVAAGTPGTEGESRQEQRRASDLGGSVDTGSAGSVRSIAAMLEMS
SIGGGARALALQKPPGPGVPGKGPDGYYLQPGAPPGSPERARVATVLATVKHKEAIGLDG
EVVNRRRTISGPVTGLVAAARRERADSVRSETGADGPSERLRAERGGSPDTIPFAEEGNL
TIKQRPRALGPARVEAGEGLSPAHRHGDLAKVEASATLKRRIRARQSQQDSVRFILTESD
TVKRRPKAKDKEPALEQAPLVVYQNGTGTVKRRPASELSGAETPPTPPPATRPDGPDFTP
PPAEPKKPFKPPVSPKPVLTQPAQKVPGPPVPIPKKMPIPSPGSPEVKRVHGTPPPVSPK
PTPPPTAPKPPKPHAAIQSVSAGSTPTPSPARQLGATAKPSSTPPSLCSSPAKPLSPGAQ
PQQVPVKPPRSAIAGPSVDSASPELVQQKLEETSASLAAALQAVEEKIKQEDSQATDSTA
EAKSTGSILDDIGSMFDDLADQLDAMLE
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaccaggagctggtgcaggcggtgaaggcggaggacatcgcggccgtgcag
aagctgctgcagaggcccaaacccggcaaagccaagctccttggatcagcaaagagagtc
aatgtcaatttccaggacaccgatgggttctctgccctgcaccatgcagcactcaatggg
aacacagagctcatctcgctgctgctggaggcacaggctgcggtggacatcaaggataac
aaaggcatgcggcccttgcactatgcggcctggcaaggcaagaaggagcccatgaagatg
gtgctgaaggcaggctcctctgtgaacatcccatcagatgagggacagatccccctgcac
ctggcagcacagcatgggcactacgacgtgtctgaaatgctcctgcagcaccagtccaac
ccctgcatcatggacaattcaggcaagacgcccctggacttggcatgcgagtttggccgg
gttggggtggtccaactgctcctgaacagcaacatgtgtgcggcactgctggagcctaag
ccaggggacaccaccgaccccaatggcaccagccctctgcaccttgcggccaagaatgga
cacatcgacatcatccggctcctcctgcaagctggcattgacatcaacaggcagactaag
gcgggcacagcactgcacgaggcagccctgtgtggcaagacggacgtggtgcggctcttg
ctggatagtggaattaatgcccacgtccggaacacgtacaaccagacggctctggatatt
gtcaaccagttcaccaccagccaggccagcaaggagatcaagcagatgctgcgggatgcc
tcagctgcactgcaggtgcgggctgtcaaggactattgcaacaactacgacctgaccagc
ctcaatgtgaaagctggagacgtcatcactgtgctggagcagcatgcagacgggcgctgg
aagggctgcatccacgacaatcggaccggcaacgaccgcgtgggctacttcccctccagc
ctcgtggaagccataagcaagcgaacagggtcccgtggggctgacatgagcccatcccac
ctttcaccatcgcagggtggatcggctgcacctgcacccaccgaggagatctgggtgctg
cggaaacctttcacaggtggcgatcgcagcagcctgggtagcacaggcagcgtggcctca
gcccgcagctccgggagtgggcagagcactggcagcggggcgcatgccctgcatgctggc
tccgagggcgtcaagctgctggcaacggtcctttcccagaaggcttctgcgcaagatgct
gccgtgggcgatgggccggccaaggcgcaggacatccccgcaggctcgtcgcggtcgcag
agtgtggccagctccccctatgcaccccagccacctgccgagcagcagctgaagaagatg
gagccaccatcagaggggaagagctcagaagctgtgtaccagtggctgtgtaagttccag
ctgcagctctatgcacccaacttcatcaacgccggctacgacatcaccaccatcagccgg
atgacgccagaggacctcacggccattggtgtcaccaagccagggcacaggaagaagatt
gcctctgagatcaataacctcaacatccccgagtggctgcccgagtacaagccggccaac
ctggcgctgtggctctccatgattggcctgtcccagtactacaaggtgctggtggagaac
ggctacgagaacatcgacttcatcactgacatcacctgggaggacctgcaggagatcggc
atcaccaagctgggccaccagaagaagctgatgctcgcagtgaagaagctggcagagctg
cagcgggctgagctgggcaagtatgagccaggcacactgaagaggaaggcagcggcatgc
ccagaggtgctggccattgagtccccaccacctgagccacccgagtgccagtcacccaag
atgacaacgttccaggacagcgagctgagcagtgagctgcaggtggccatgacaggtgaa
ggacctgaggagacgcccgagaaaccagccaaccctgcagcccctggctaccgatcacca
ccagcgctgggcggccgcgccaggcagatgagcagctcacaggagctgctgggtgatggc
ccccgtgcccccgccagcaccgccatctccaagagccaggagtacctggcagagggggcc
cccgagggtccccctgtgccgccaaccaaggagctccgccagccacggcacggccactct
gtcaagcgtgccagtgttccgccagtgcccggcaaaccccggcaggccttcccgcctact
gccgggcacctgacaccaccacagacccctggcaagccacgtccaccctccccacagggc
ccatcagcaccccatgctactgccaaggtgaagcccactccacagctgctgccaccgggt
gagcgccccgcatcaccccgctccctgccccagtctcccacgcaccgtggctttgcctac
gtccttccgcagcccaccgatggtgagggggcccctccaggggtgccggtcctgcccgtc
tcagtgccggtgctgtgcctgccaccagcaggtgagggtgaggaggagccggggaggccg
aagaaaagggcacacagcctgaaccgctacgccacctccgacagcgagcaggagcgggac
gagctgctggtgcctgacgcggggccttatgctactgtgcagcggcgcgtggggcgcagc
cactcagtgcgggcacctgctggtggtgacaagaatgtcaaccgcagccagtccttcgcc
atccgccccaagaagaaggggcccccgccaccaccccccaagcgctccagctctgctata
tccagtgctggcatggccgaggacttccccaaggatggtgaaggtgaggtggctgctgga
acccctggcactgagggggagagtcgtcaggagcagcggcgtgccagcgatctgggtggc
agcgtggacacgggcagcgccggcagcgtgcgcagcattgcagccatgctggagatgtcc
tccatcggtggtggggcgcgggcgctggccctgcagaaaccacctgggcctggtgtgcct
gggaaggggcccgatgggtactatctgcagccaggagctcccccgggaagccctgagcgt
gcccgtgtggccactgtcctggctaccgtcaagcacaaggaggccattgggctggatggg
gaggttgtgaaccggcgccggaccatcagcggtcctgtcaccgggctggtggcggccgca
cgccgcgagcgtgccgacagtgtgcgctctgagacaggcgctgatggccccagcgagcgt
ctgcgggctgagcgtggtggctctccagacacaatcccctttgctgaggagggcaacctc
accatcaagcagcgaccacgtgccctgggaccagcccgggtggaggcaggagaagggctg
tccccagcgcaccgccatggagacctggccaaggtggaggccagtgccacacttaagagg
cgcatccgtgcccggcagagccagcaggacagcgtccgcttcatcctcaccgagtctgac
actgtcaagcgccggcccaaggccaaggacaaggagccagcgctggagcaagcccctctt
gtcgtctaccagaatggcaccggcactgtcaagcggcggccagcttcagagctgagtgga
gctgagactcccccaaccccaccgcctgccacccgccccgatggccctgacttcacccca
ccgcctgccgagcccaagaaacccttcaagccaccggtgtcccccaagcctgtgctaacg
cagccagcgcagaaagtccctgggccaccagtgcctatccccaaaaagatgcccatccca
agcccaggcagcccagaggtgaagcgggtccacggcacaccacccccggtatcccccaag
cccacaccaccccccacggcccccaagccccccaagccccatgccgccatccagtcggtg
agcgcaggctccacgccaactccgtcccccgcccggcagctgggtgctactgccaagccc
tccagcacaccgccctcactctgctccagccctgccaagcccctctcacccggcgctcag
ccccagcaggtgccagtgaaaccgccgcgttccgctatcgctggaccctctgttgacagt
gccagccctgagctggtgcagcaaaagctggaggagaccagcgcatccctggctgctgcg
ctgcaggcagtggaggagaagatcaagcaggaggacagccaggcaacagactccactgca
gaggcaaagagcacaggcagcatcctggatgacatcggcagcatgtttgatgacctggcc
gaccagctggatgccatgctggagtga
DBGET
integrated database retrieval system
