Tympanuchus pallidicinctus (lesser prairie-chicken): 128078994
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Entry
128078994 CDS
T08967
Symbol
VPS35L
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128078994 (VPS35L)
Membrane trafficking [BR:
tpai04131
]
Protein recycling
Others
Retriever complex
128078994 (VPS35L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb4
DUF5667
Motif
Other DBs
NCBI-GeneID:
128078994
NCBI-ProteinID:
XP_052535751
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MAAFPWHARSRNYASESDVCKVESVPLDFGDYHPLKPITVTESKTKKMSRKGSTSSTSSS
SSSSVMDPLSSVLDGTDPLSLFAAAADPLATTASMDGIRKKRDKDDSSALGSDFEQWSSK
RGEILARYTTTEKLSINLYMGSEKGKATTSGSAVSEKVRTRLEELDDLEEGSQKELLNLT
QQDYVNRIEELNQSLKDAWSSDQKVKALKIVIQCSKLLSDTTVIQFYPSKFVLITDILDT
FGKLVYERILSMCMDNRVSSSDNFSPETVNDTAKETCLNWFFKIASIRELVPRFYVEAAI
LKCNKFLSKTGISECLPRLTSVIRGIGDPLVAVYARAYLCRVGMEVAPQLKESLNKNFFD
FLLTFKQIHGDTVQNQLVVQCVEIPLYLTLYSPAIDWILQCIAYHAPEVLLTEMMERCKK
LGNNALLLNSVMSAFRAEFIAARSMDFIGMIKECDESGFPKHLLFRSLGLNLALADPPEN
DHLQILNEAWKVITKLKNPQDYINCAEVWVEYTCRHFTKREVNTVLADVIKHMTPDRAFE
DAYPQLQSIIQKVITYINDFSLLFSVEKFLPFLDMFQKESVRVEVCKCIMESFIKHQQES
TKDPVILNALLHICKTMHDSVNALTLEDEKRLLAALINGFIKMVSFGRDFEQQLSFYVEA
RSMFCNLEPVLVQLIHSVNQLAMETRKVMRGNHSRKTAAFVRACVAFCFITIPSLSSIFT
RLNLYLHSGQVALANQCLSQADAFFKAAVSLVPEVPKMISVDGKMRPSDAFLLEFLCNFF
STLLVVPDHPEQGVLFLVRGLLNVIQDYTWEDNSDDKVRIYTNVLHLLSAMTQETYIYHV
DKVDSNDTLYGGDSKFLAEISKLCETVIAQILDHLKTLGKEETLKRQSQLALYFFNTILA
HGDLRNNKLNQLSVNLWNLAQKHGFADTKTMVKTLEYMKRQSKQPDMSHFTDLALRLPLQ
SRT
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttcccctggcatgccaggtcaagaaattatgcttcagaatctgatgtctgc
aaagtagaatctgtgcccttggattttggtgactaccatccactgaaacccattacagtt
accgaatccaagaccaagaagatgagccggaaaggaagtacttcttctacctcttcttct
tcttctagttctgtgatggatccactgagcagtgtgttggatggtaccgatcccttgtca
ctctttgcagcggctgcagatcctttggctaccactgcttccatggatggcatacgaaag
aaacgggataaagatgacagctcagcactaggaagtgactttgaacagtggtcaagcaaa
cgtggtgaaatacttgctagatacacaacaactgagaagctctctattaatctgtacatg
ggatctgaaaaaggaaaagctacaactagtggctcagcagtttctgaaaaagtgaggaca
aggttggaagaactggatgatctggaagaggggtcgcagaaagagctgttgaacttgact
cagcaggattacgtgaatcgaattgaagaactcaaccagtctttaaaggatgcttggtcc
tctgatcagaaagtaaaagctctgaaaatagtcattcagtgttcaaagcttctttcagac
accacagtaatccagttttatccaagtaaatttgtcttaataacagatatacttgatact
ttcggtaaactagtgtatgaaagaattctgtcaatgtgcatggacaatcgtgtctcttca
tcagataatttttctccagagactgttaacgatactgctaaagagacttgcttaaactgg
tttttcaagattgcttcaatcagggaactcgttcctagattttacgtggaagcagcaata
ctgaagtgcaataaattcctatctaaaacggggatttcagaatgtctcccacgattaacg
tctgtgattagaggaattggagatccactggttgcagtctatgccagagcatacctttgc
agggttgggatggaagtggcaccacagctcaaagaaagcctcaacaaaaatttctttgac
tttcttctaacgtttaaacaaattcatggagatacggttcagaatcaactggtagtacaa
tgtgtagaaattcctttgtatttaactctctactctcctgctatagactggattttacag
tgtattgcataccatgctcctgaggttctgcttaccgagatgatggagaggtgcaaaaaa
ctgggaaacaatgctctgctattaaattcagtaatgtcagccttcagagcagagtttatt
gctgcaaggtctatggacttcattggcatgattaaagagtgtgatgaatctggattccca
aagcatcttctctttcgctccttgggattaaacctggcattggctgatcctcctgaaaat
gatcaccttcaaatattgaatgaagcctggaaggttataacgaagctgaagaacccacag
gattacatcaactgtgctgaagtgtgggtggagtatacatgcagacactttacgaagcga
gaagtcaatacagttttggcagatgttatcaaacacatgactcctgatagagcatttgaa
gatgcttacccacagttgcagtcaattattcagaaagttattacctacatcaatgatttc
tctctgcttttttcagtggagaaattcttgccatttctggatatgttccagaaggagagt
gtgagagtggaggtttgcaagtgcatcatggaatcttttattaagcatcagcaggaatct
acaaaggaccctgttatactcaatgctcttctgcatatctgcaagacgatgcatgactct
gtgaatgctctgacgcttgaggatgagaaaaggttgttagcagctttgataaatggattc
ataaaaatggtttcattcggtcgtgactttgaacagcaactgagtttctatgttgaagct
aggtctatgttttgcaatctggagcctgttctagtccagctaattcattctgtgaaccaa
ctagcaatggagacaagaaaggtgatgagaggaaatcattctagaaagaccgctgcattt
gtcagggcttgtgttgccttctgcttcattacaattccatctctgagcagcatctttaca
cgtcttaatttgtatctgcactctggacaggttgctctggcaaatcagtgcctttcacaa
gctgatgcttttttcaaagctgcagtgagccttgttcctgaagtgccaaaaatgatcagt
gtagatggaaagatgcgaccttctgatgccttcctcttggaattcctttgtaacttcttt
tccacattattagttgttccagaccatccagaacaaggagtgttgtttcttgtgcgagga
ttactaaatgtgattcaggattatacttgggaggataacagcgatgacaaagtcaggatt
tacactaatgttttgcatctgctgtctgcaatgactcaagaaacatatatctaccatgta
gataaagtggattccaatgataccctgtatggtggagactccaagttcctggctgaaatc
agtaaactatgtgaaacagtaatagcacagattctggatcatctcaaaacccttggaaag
gaagagactctgaagcgacaaagccagttggcactctatttcttcaacacgattttagct
catggcgatctacgaaacaacaaactaaaccagctttcagtgaatctctggaatcttgcc
cagaaacatggctttgctgacaccaagacaatggtaaaaactctggaatacatgaagagg
caaagcaaacaacctgatatgagtcacttcacagacttggcccttcgccttcctctgcag
tcaagaacctga
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