Tympanuchus pallidicinctus (lesser prairie-chicken): 128079006
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Entry
128079006 CDS
T08967
Symbol
THUMPD1
Name
(RefSeq) THUMP domain-containing protein 1
KO
K06963
tRNA acetyltransferase TAN1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpai03016
]
128079006 (THUMPD1)
Transfer RNA biogenesis [BR:
tpai03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
128079006 (THUMPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THUMP
Cwf_Cwc_15
DUF3091
DUF1796
VHL_C
RNase_P_Rpp14
S6PP_C
Motif
Other DBs
NCBI-GeneID:
128079006
NCBI-ProteinID:
XP_052535784
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MAAPEAAARKRRLKGHFAARAKRPRGGGGRQLEAGMRGILITCNMNERKCVGEAYSLLGE
YGDLLYGPEQLSEPAERLSGSEREEEREEEDDDDDAEAALKKEVGQIRACTERQLRRFQS
VESGANNVVFIRTRGIEPENLVHHILKDIHTTKKKKTRVILRMLPISGTCKAFLEDMKKY
TETFFEPWFKAPNKSTFQIVYKARNNSHMNREEVIKELAGIVGSLNPENKVDLNNPQHTV
VVEIIKNVCCLSVVRDYVLFRKYNLQEVVKSNKEDMQQNPSNVSEEQNSTAVKPETMEEN
LKEVIQEQE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgccggaggcggcagcacggaagcggcggctgaaggggcatttcgcggctcgc
gctaagcggccccgcggcggcggcgggcggcagctggaggccggcatgcgcggcatcctc
atcacctgcaacatgaacgagcgcaagtgcgtgggggaggcctacagcctgctgggcgag
tacggggacctgctgtacggccccgagcagctctcggagcccgcggagcgcctgtcgggg
agcgagagggaggaggagcgggaggaggaggacgacgacgacgacgcggaggcagcgctg
aagaaggaggtcggacagatccgcgcctgcaccgagcggcagctgcggcgcttccagtca
gtggagagcggcgccaacaacgtcgtcttcatccgcacccgcggcatcgaacctgagaac
ctggtgcaccatatattaaaggacattcataccactaaaaagaagaaaaccagagtaatt
ctgcgcatgctgcccatttctggaacttgcaaggcttttctggaagatatgaaaaaatac
acagaaacgttttttgagccttggtttaaagcccccaataagagtactttccagatcgtt
tacaaagctcgtaataacagtcacatgaatagagaagaagtaattaaggagctggcagga
attgtgggcagccttaatccagaaaacaaagttgatctcaataatccacaacatacagtt
gtggtggaaataataaagaatgtttgttgcttgagtgtggtgagagactatgttctattc
agaaaatacaatctacaggaggtggtgaagagcaacaaagaagacatgcaacaaaaccca
tcaaatgtgtctgaagaacagaactcaacagccgtaaaaccagaaaccatggaagagaac
ttgaaggaagtaatacaagaacaagagtga
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