Tympanuchus pallidicinctus (lesser prairie-chicken): 128079016
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Entry
128079016 CDS
T08967
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04517
IgSF CAM signaling
tpai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128079016 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128079016 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tpai04812
]
128079016 (SPTBN1)
Cytoskeleton proteins [BR:
tpai04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128079016 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
128079016 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SLATT_6
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
128079016
NCBI-ProteinID:
XP_052535809
LinkDB
All DBs
Position
Unknown
AA seq
2362 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIKERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAGSPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALISALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSPNAE
AIQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRKPP
TPEPSPKVAEDGGSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSS
KESSPVPSPTADRKATAAIQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRS
WHNVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKEAVCEVAVDYKKKKHVFKLRLTD
GNEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSP
GKREKDKEKDKEKRFSLFGKKK
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacagtagcgacagattacgacaacattgaaatccagcagcagtacagtgat
gtcaacaaccgctgggatgtcgatgactgggacaatgagaatagttctgctcgactgttt
gagcgctctcgcatcaaggccctcgctgatgaacgtgaggcagttcagaagaagactttc
accaagtgggttaattcccacttggcacgtgtgtcatgcagaattacagacctgtacacc
gaccttcgcgatggaaggatgctcatcaaactcctggaagttctttcaggagagagactt
cccaaaccaactaaaggaaggatgcgcatccattgcttggagaatgttgataaagccctg
cagttcctgaaagagcaacgagtgcacctggaaaacatgggatctcatgatattgtggat
gggaatcacagactgacacttggccttatttggactattatcttgagattccagatccaa
gatatcagtgttgaaactgaggacaacaaagagaagaaatctgctaaggatgcactgctt
ttgtggtgccagatgaagacagctggttaccccaacgtcaacatccacaacttcacgaca
agctggagggacggaatggctttcaatgcactgatacacaagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gctgagcaacaccttggtcttactaagctcctggaccctgaggatatcagtgttgatcat
cccgatgaaaagtcaatcatcacctacgtggtgacatattatcactacttctccaaaatg
aaagctttagctgttgaaggaaaacgcattggaaaggtgctcgacaatgccattgaaaca
gagaaaatgattgaaaaatatgaatcgctggcttctgaccttctggagtggattgagcaa
accattatcatcctcaacaaccgcaaatttgccaactccctagttggtgtgcagcagcag
ctgcaggcgttcaacacctaccgcacagtagagaaaccacccaagtttacagaaaaagga
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagtc
tacatgccaagggagggcaaactcatctctgacataaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcggaatgagctcatcagacaagagaaactg
gaacaacttgcacgcagatttgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctggtttctcaggataactttggctttgaccttccagcagtagaggctgca
acgaaaaagcacgaggccattgaaacagacattgcagcatatgaagagcgagtccaggct
gtggttgcagttgctaaggagcttgagactgaaaattatcatgatatcaaacgcatcact
gcaagaaaggacaatgttatacgcctgtgggagtacctcctggagctgctcagggcacga
aggcaacggctggaaatgaatcttggcctacaaaagattttccaggaaatgctatacatt
atggactggatggatgagatgaaggtgcttctgctgtcacaagactatggcaaacacttg
ttaggagtcgaagacctgttgcagaaacatgctctggtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcatctgctcagaagtttgccaccgatggagaaggt
tacaagccgtgtgacccgcaggttattagggaccgcgtcgctcacatggagttctgttac
caagagctgtgccagctcgcagctgagcgcagggcccgcttggaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaagagggttggatcagggagaaggagcagatc
ctttcgtctgatgactacgggaaggacctaaccagcgtcgtccgtctcctgagcaaacat
aaggcatttgaagatgaaatgagcggtcgcagtggccactttcagcaggcgataaaagaa
ggtgaagacatgattgcggaagagcattttgggtctgagaaaatcaaagaaagaattaag
gacattcgggagcagtgggctaacttggaacagttatctgccattaggaagaaacgtctg
gaggaagcctctctccttcaccagttccaggctgatgctgacgacattgatgcgtggatg
ttggacatcctcaaaattgtctccagcaacgatgttggccatgatgaatattccactcag
tccttggtcaagaaacacaaggatgttgctgaagagattgcaagctaccggccaaccatt
gactctcttcatgaacaggcaaaggctctaccacaggagcatgccgggtctccagatgtg
caaggcaggttgtctgggatagaagaaagatacaaagaggttgctgagctgactcggctg
cgtaagcaggctttgcaggatacccttgctctttataagatgttcagtgaggcagatgct
tgcgagctttggattgacgagaaggagaagtggctgaataatatgcagatcccagagaag
ctggaggacctggaagtgatccagcacagatttgaaagcttagagccagaaatgaacaat
caggcttcccgtgttgcagtcgtgaaccaaattgcaagacagctaatgcatagtggccat
ccaagtgagaaggagataaaagcacagcaagataagctcaacacaagatggagccagttc
agagaactggtagacaggaagaaggatgccctgatctctgccttaagtatccagaattac
caccttgaatgtaatgaaaccaagtcctggatcagggagaaaaccaaagtgattgaatcc
acacaagatctgggtaacgatctggctggagtgatggctctgcagcggaagctgacgggc
atggaacgtgacctggtagccattgaagctaagctcagtgacctgcaaaaggaggcagaa
aagctggaatcggagcatcctgaccaggcacaagctatcctttcacggcttgcagaaatc
aacgatgtatgggaagaaatgaagaccaccctgaagaaccgggaggagtctcttggagag
gcaagcaaactgcagcagttcctgagagatctggatgacttccagtcttggctatccaga
acgcagactgcgatcgcctccgaagacatgccgaacacactgacggaggctgagaagctg
ctcactcaacacgagaacattaagaacgaaatcaacaactacgaggaagactatcagaag
atgagggacatgggtgagatggtgacacaagggcagactgatgctcagtacatgttctta
cgccagcgcctgcaggctttggacactggatggaatgagcttcacaaaatgtgggagaac
aggcaaaatctcctttcccagtctcatgcctaccagctctttctcagagacaccaagcaa
gcggaagcatttcttaacaaccaggagtatgttttggcacacacagaaatgcccactacc
ttggaaggagcagaagctgctattaagaaacaggaggatttcatgaccaccatggatgcg
aatgaagaaaagatcaatgcagttgtagagacgggcagaaggctagttagtgatgggaac
atcaactctgataaaatccaggagaaagtggactctattgatgacaggcataggaagaac
cgtgaagcagccagtgaacttctgatgagactgaaggataacagggatcttcagaagttt
cttcaggattgtcaagagctctcactctggatcaatgagaagatgcttacagcccaggat
atgtcttacgatgaggcaaggaacctgcacagcaagtggctgaagcatcaggcatttatg
gcagaacttgcgtccaacaaagaatggctggagaagattgaaaaggagggaatgcagctc
attgcagagaaaccagagactgaagctgtagtgaaggaaaagctaacgggtcttcatcaa
atgtgggaagagctcgaatccactactcagaccaaggctcagcgcctcttcgatgcaaac
aaggcagagctttttacccagagctgtgctgatttggataagtggctgaatggtttggag
agccaaattcagtcggacgactacggaaaagacctcaccagtgtcaacatcctgttgaag
aaacagcagatgctagagaatcaaatggatgttcgtaagaaggagatagaagagctacaa
agccaggcacgggctctaagtcaagaagggaagagtacagatgaagtagatggcaaacgc
cttactgttgaaaagaaatttttggagttgttggaacctttgaatgaaagaaaagcaaac
ctgctggcctccaaagaaatccaccagttcaaccgggatgtggaggatgaaattttgtgg
gttggagagaggatgcccatagcaacatctaccgatcacggacacaacctccagactgtg
cagctactgataaagaaaaatcagacacttcagaaagaaatccaagggcatcagcctcgc
attgatgatatttttgagaggagtcaaaacatcatcacagacagcagcccgaatgccgaa
gcaattcagcagagacttgcagacttgaagcagctgtggaacctcctaattgaggagacg
gagaaacgccacaagcgcctggaggagtctcaccgcgcacagcagtactacttcgatgct
gctgaggctgaggcctggatgagtgagcaggagctgtacatgatgtcagaagagaaagcc
aaggatgaacagagtgcagtgtccatgctgaagaaacaccagattttggaacaggctgtg
gaagactatgctgagactgtgcaccagctttcaaagaccagcagaactttggtggcagat
aatcatcctgaaagtgagcgtatcagcatgcgccagtccaaagtggataagctgtatgca
ggcctgaaggatctcgcagaagagagaaggggcaagctggatgagagacacaggttgttc
cagctgaacagagaggtggatgacctggagcagtggatcgcagaaagggaggtggtggca
ggatcccacgagctgggacaggattacgagcacgtaacgatgctgcaggagcgattccga
gagtttgcccgagacactggaaacatcgggcaggagcgcgtcgacaccgtgaaccacatg
gctgacgagctcatcaactccggacattcagatgctgccacaattgcagaatggaaggat
ggtctcaatgaggcctgggctgatctcctggagctcattgacacgagaacacaaattctt
gcagcctcttatgaactgcacaaattttaccacgatgccaaggaaatcttaggacgcatt
caagacaaacacaagaaactgccagaagagcttggtagagaccaaaacacagtggaaaca
ctacagagaatgcacacaacatttgaacacgacatccaagcgctcggcacacaggtaaga
cagctccaggaggatgctgcacgccttcaggctgcctatgctggagacaaagctgatgac
atccagaagagagaaaacgaagtcctagaggcatggaaggcgctgctggatgcctgtgag
ggccgcagggttcggctggtggacacaggagacaaattccgtttcttcagcatggttcgg
gatctcatgctttggatggaagatgtcatccggcagattgaagcccaggaaaagccaagg
gatgtttcatctgttgaactactaatgaacaatcaccagggtatcaaagcagaaattgat
gcccgaaatgacagctttactacctgtatcgagctcggcaaatctcttctggcaagaaaa
cactatgcatcagaggagatcaaggaaaagctactgcagctgacagaaaagagaaaagaa
atgattgacaagtgggaagacagatgggagtggctgagactgattttggaggtgcaccag
ttttcaagggacgcgagcgtggctgaggcctggctgctgggccaggagccctacctgtcc
agtcgtgaaataggacaaagtgttgacgaagtggagaaattaattaagagacacgaagca
tttgagaaatctgcagctacttgggatgagagatttgcagcactggaaagactgaccacg
ttggaactgctggaggttcgtcgacaacaagaggaagaggagaggaagagaaagccacct
actccagagccaagcccaaaggttgcagaagacggaggctcccagcagcaatgggatggg
acaaaaggagaacaggtttcccaaaatggtttgccatcagaccaggaatctccacgggtg
gcagaaactgcggaaacaaacgaaatggttaatggagctgcagaacagaggacaagttca
aaagagtccagtcctgttccttctccaacagcagaccgcaaagccacggctgccattcag
gctcagactgctgctaccctaccagccaaaacacaggagattccttcagctcagatggag
ggcttcttgcatcgtaaacacgaatgggagacacacagcaagaaagcctccagcaggtca
tggcataacgtgtactgtgtcataaacaaccaagagatgggcttctacaaggattcaaaa
gctgctgcttctggcattccctatcacaatgagatcccagtcagcttgaaagaagcagtc
tgtgaagtagcggtcgattataaaaagaagaagcatgtgttcaagctaagattgactgat
ggcaatgaatacctcttccaagccaaagatgatgaggagatgaacacgtggatccaggcc
atcacatcagctatctcatctgataaaatcgaagtgtccccgaccactcagagcactcca
gcctccagccgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagtcct
ggcaagagagagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaa
aagaagtga
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integrated database retrieval system
