Tympanuchus pallidicinctus (lesser prairie-chicken): 128079249
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Entry
128079249 CDS
T08967
Symbol
ABCA3
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128079249 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpai02000
]
128079249 (ABCA3)
Transporters [BR:
tpai02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128079249 (ABCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_23
AAA_22
AAA_30
DUF4162
AAA_15
AAA_29
SRP54
Motif
Other DBs
NCBI-GeneID:
128079249
NCBI-ProteinID:
XP_052536206
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MVVLRQFGLLLWKNYILQKRQILVTIIEICLPLLFAAILIALRHRVHSVSHPNATIYPSL
SVDDLPGFFYRRHSSNPWELAYVPSNSSAVQSVARAVERALPISIRAQGFASEREFEDYV
RRDNRSGSVLAAVIFKHHFSSSADPLPLQVDYELRFKYSPRNAPRSEQTGLNPNLDRDWH
TSYLFPLFQLPGPREAKFADGGTPGYIREGFLAVQHAVDRAIMQYHTNSSAPSLLENVTV
VVQRFPYPSYVNDLFVLAIQNQLPLLLMLSFTYTSLNIVRAVVHEKEKKLKEYMHMMGLS
NWLHWSAWFLMFFLFLLVSVFFVTVLFCVKVSEQGAVLTSSDPTLVFTFLAIFSISTISF
NFMVSTFFSRANVAAAAGGFLYFFSYIPYFFISPRYDLMSHSQKLASCLISNVAMAMGAQ
LIGMFEGKGTGIQWRDLMKPVSVDDNFTLAQVLGMLLLDSVLYGLVAWYVEAVFPGEYGV
PQPWYFFLTPSYWCGQPRTVIGKEKEEEEDPEKALKSQYIEEEPADLVSGIKIKHLSKVF
KVGNKTKEAVKDLTVNMYEGQITVLLGHNGAGKTTTLSMLTGLYSPTSGQAYINGYEISQ
DMVLIRRSLGLCPQHDVLFDNMTVEEHLYFYAGLKGYPASKCPEEINHILRILNLEDKRH
SLTKALSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPASRRATWDLLQQQRSNRTILLT
THFMDEADLLGDRIAIMAKGELQCCGSSLFLKRKYGAGYHMVMVKEPYCNLGEISRLICQ
YVPNATMESNAGAELSFILPKESTHRFEALFTELELKREELGIASYGASVTTMEEVFLRV
GKLVDSSMDIQAIQLPALQYQHERRSNDWAMDDSSSLSGMTDMTDDSGALITEDCSSIKL
NTGFYLCCQQFYAMFMKRAMYSWRNWKMVAAQFLVPLIFTAFALIVAKTFPGPRDSSMLR
LTLEPYGQTIVPFSVPTASGLPQKLAEQFVELLDAQHQSPLEVPGGLEEYLISRASEEGG
AFNEHYIAAASFEGVDNHTVVTALFNNQAYHSPATALMLADNAVFRVLMGPNASITVTNY
PQPRNITEKAKDQLMEGQTGFAIAINLLYGMASLASTFALLLVSERAIKAKHVQFVSGVY
VVNFWLSALLWDIINFLIPCALMLVIFQAFDVQAFTQDSHLVDVMLIFLLYGWAIIPLMY
LLSFFFSVAATAYTRLTIFNILSGTATFLAVTIMSIPELGLVDLSRTLDKIFLTLPNYCL
GQCISDFYQNYEFIQFCTSSVEAIFICKAFNISYQVNYFSWESPGIGRYLTSLTVQGFSF
LFLLFLIETNLLWRLKTLVCGICRRRKWVALLNSVSVLPEDRDVADERKKVLESPPELLS
SLSSPLVIKELTKVYDSRESLLAVDRISLAVSKGECFGLLGFNGAGKTTTFKMLTGDESI
TSGDAFVDGHSILANIKKVQQRIGYCPQFDALLEHMTGRETLSMYARLRGIPERYIGSCV
ENMLRGLLLEPHADKLVRTYSGGNKRKLSAGIALIGGPPVIFLDEPSTGMDPVARRLLWD
AVTRTRECGKSIIFTSHSMEECEALCTRLAIMVNGQFKCLGSPQHLKSKFGSGYTLLAKT
RTDEEGELQAFKAFVEKTFPGSVLKHEHQGMVHYHLTNKNLSWAQVFGALEKAKEKYRLE
DYSVSQISLEQVFMSFTRFQHYTEDRGK
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggttgttctcaggcagtttgggctgcttctctggaagaactacatcctgcagaaacgt
cagattttggtcaccatcatagagatctgcctgccgctgctgtttgctgccatcctgatt
gctctgaggcaccgcgtgcactccgtcagccaccccaacgccaccatctacccgtccctg
tccgtggatgacctgccaggcttcttctaccgacgacactccagcaacccctgggagctg
gcgtacgtcccctccaacagcagcgccgtgcagagcgtcgccagagctgtggagagagct
ttgcccatcagcatccgagcccagggcttcgcctcggagcgagagtttgaggattacgtc
cgacgggacaaccgctcgggcagcgtgctggctgccgtcatcttcaaacaccacttcagc
agcagcgcagacccgctgcccctccaggtggactatgagctgcgcttcaagtacagcccc
aggaacgccccacggagtgagcagacggggctgaaccccaacctggaccgggactggcac
accagctacctcttcccactcttccagctgcctgggccccgcgaggccaagtttgcggat
ggcggaacgccgggttacatccgggagggcttcctggcggtgcagcatgccgtggatcgg
gccatcatgcagtatcacaccaacagctctgcccccagcctgctggagaacgtcaccgtg
gtggtgcagcgcttcccctacccgtcctacgtcaacgacctcttcgtcctcgccatccag
aaccagctcccactgctgctcatgctcagcttcacctacacctcgctcaacatcgtccgt
gccgtcgtgcacgagaaggagaagaagctgaaggaatacatgcacatgatgggcctcagc
aactggttgcactggagcgcctggttcctcatgttcttcctcttcctgctggtgtctgtg
ttctttgtcaccgtgctcttctgtgtcaaggtgagtgaacaaggagctgtgctcactagc
agtgaccccacgctggtgttcaccttcctcgccatcttctccatctccaccatctccttc
aacttcatggtgagcaccttcttctccagagcaaatgtcgcagctgctgctggaggcttc
ctgtacttcttctcctacatcccctacttcttcatctcgcctcgctacgacctgatgtcc
cacagccagaagctggcatcctgcctcatctccaacgtggccatggccatgggagcacag
ctcataggcatgtttgaaggaaaagggactggcatccagtggagggacctcatgaaacct
gtcagcgtggatgacaacttcaccttggcacaagtcctggggatgctgctcctggattca
gtgctctatggcctggtggcctggtatgtggaggctgtcttcccaggagagtacggcgtg
cctcagccctggtacttcttcctgacgccctcctactggtgtgggcaacccaggactgtc
attggaaaagagaaggaggaggaggaggaccctgagaaagccctgaagagccaatacatc
gaggaggagcctgctgacctcgtgtcagggatcaaaatcaagcacctttccaaggtcttc
aaagtgggaaacaagacaaaagaggcagtgaaggacttgacggttaacatgtatgaaggg
cagatcactgtcctgctgggacacaacggtgctgggaagaccaccactctgtccatgctc
acaggtctgtactccccaacaagtgggcaggcgtacatcaacggctatgagatctcacag
gacatggtcctgatccgccggagcctggggctgtgtcctcagcacgacgtgctcttcgac
aacatgacagtggaggagcacctctacttctatgcagggctgaagggatacccagcctcc
aagtgtcccgaggagatcaaccacatcctgcggatcctcaacctggaggacaagcggcac
tcgctgaccaaggcgctctctggtggcatgaagcgcaagctgtccattggcatcgccctc
atcggggactccaaggtggtgatgctggatgagccaacgtcggggatggatccagcttct
cgcagggccacctgggacctcctccagcagcagaggagcaaccgcaccatcctgctgacc
acacacttcatggatgaggctgacctgctgggggaccgcatagctatcatggccaagggc
gagctgcagtgctgcggctcctccctcttcctcaaacgtaaatatggggctggataccac
atggtgatggtgaaggagccgtactgtaacctgggggagatctcccgcctcatctgtcag
tacgtgcccaacgccaccatggagagcaatgctggggcagagctgtccttcatcctgccc
aaagagagcactcacaggtttgaggccctattcacagagctggagctgaagcgggaggag
ctgggcattgccagctatggggcctcggtcaccaccatggaggaagtcttcctgagggtt
gggaagctggtggactccagcatggacatccaggccatccagctgcctgctctgcagtac
cagcacgagcggcgctccaacgactgggccatggatgactccagcagcctgagtgggatg
acagacatgacagatgacagcggggcactcattacagaggactgctccagcatcaagctc
aatactgggttctacctgtgctgccagcagttctacgccatgttcatgaagcgagccatg
tacagctggcgcaactggaagatggtggcagcgcagttcctcgtgcctctcatcttcact
gccttcgccctcatcgtggccaagaccttccctgggcccagggactcctccatgctgagg
ctgaccctggagccctatgggcagaccatcgtgcctttctccgtccccaccgcctcaggg
ctgccgcagaagctggcagagcagttcgtggagctgctggatgcccagcatcagtcacca
ctggaggtgccgggtggcctggaggagtacctcatctcaagagcatccgaggaggggggg
gccttcaatgagcactacatcgccgctgcctccttcgaaggagttgacaaccacacggtg
gtcactgcactgttcaacaaccaggcctaccactctccagccaccgccctcatgttggct
gacaacgctgtcttcagggtgctgatgggccccaacgcttccatcacagtcaccaactac
cctcagccccgcaacatcaccgagaaggccaaggaccaactcatggaaggccagaccggg
tttgccatcgccatcaacttgctgtacggcatggcctcgctcgccagcacctttgctctc
ctgctggtcagtgagcgggccatcaaggccaagcacgtccagtttgtcagcggcgtctac
gtggtcaacttctggctgtcagccctgctctgggacatcatcaacttcctcattccgtgt
gctctgatgctggtgatattccaagcgtttgatgtgcaagccttcacccaagacagccac
ctcgtcgatgtgatgttgatcttcctcctttatggctgggccatcatcccccttatgtac
ctcctcagcttcttcttctcagtggcagccacagcctacacccgtctcaccatcttcaac
atcctctcgggcacagccaccttccttgctgtcaccatcatgagcatcccagagttaggt
ttggtggacctctccagaactctggataaaatctttctcaccttacccaattactgcttg
ggtcagtgcatcagtgacttctaccagaactatgagttcattcagttctgcacctcttct
gttgaagccatcttcatatgcaaggcattcaatatcagctatcaggtgaactacttttcc
tgggagtcgcctgggatcgggcgatatctgacctccttgaccgtccagggtttctccttc
ctcttcctcctcttcctcattgagacaaaccttctctggagactgaaaactttggtctgt
ggcatctgcaggcggcggaaatgggtggcactgctgaacagtgtgtctgtgttgcctgag
gaccgggatgtggcagacgagaggaaaaaggttttggagtcaccaccagagctgctgtca
tcactgagcagccctctggtcatcaaggagctcactaaggtctatgacagccgggaatcc
ctgctggcggtggacaggatctctttggcagtcagcaaaggggaatgctttggtcttctt
ggcttcaacggagcaggcaaaaccactacattcaagatgctgacgggtgatgagagcatc
acgtcgggggatgccttcgtggatggccacagcattctggccaacatcaagaaggtgcag
cagcggatcggctactgccctcagtttgatgccctgctggagcacatgacgggccgtgag
acgctcagcatgtatgccaggctgcggggcatccctgagcgttacatcggcagctgcgtg
gagaacatgctgagggggctgctgctggagccccacgccgacaagcttgtcaggacctac
agcggtggtaacaagcggaagctgagcgctggcattgcccttattggtggcccccccgtc
atcttcctggatgagccctccactggtatggaccccgtggcccggcgtctgctctgggat
gcggtgactcggacacgggagtgtggcaaatccatcatcttcacctcccacagcatggag
gagtgcgaggcgctgtgcacgcggctggccatcatggtgaacgggcagttcaagtgtctg
ggcagccctcagcacctgaagagcaagtttggcagtggctacaccttgctggccaaaacg
cggactgatgaggagggcgagctgcaggccttcaaggccttcgtggagaagactttccca
ggcagtgtcctgaagcacgagcaccagggcatggtgcactaccacttgaccaacaagaac
ctcagctgggcgcaggtctttggggccttggagaaagccaaagagaagtatcgcttagaa
gactattcggttagccagatatccctggagcaagtcttcatgagcttcactcgcttccaa
cactacacagaggacagagggaaatga
DBGET
integrated database retrieval system
