Tympanuchus pallidicinctus (lesser prairie-chicken): 128079271
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Entry
128079271 CDS
T08967
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03440
Homologous recombination
tpai03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128079271 (TOP3A)
03460 Fanconi anemia pathway
128079271 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpai03032
]
128079271 (TOP3A)
03400 DNA repair and recombination proteins [BR:
tpai03400
]
128079271 (TOP3A)
Enzymes [BR:
tpai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
128079271 (TOP3A)
DNA replication proteins [BR:
tpai03032
]
Eukaryotic type
DNA Topoisomerases
128079271 (TOP3A)
DNA repair and recombination proteins [BR:
tpai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
128079271 (TOP3A)
FA (Fanconi anemia) pathway
128079271 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
128079271
NCBI-ProteinID:
XP_052536245
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MCWAVLCVRVKNCLGGCRERDVGKGERIWSAALSSGPTALSGRTSPGERKQRYALVPWEL
SQLPVMNFQARLLASCGVRMLPQPWRSFSRAAEGPAVQRIRKVLCVAEKNDAARGIADLL
SNSRMRRREGFSKFNKIYEYDYQMFGQNVTVVMTSVSGHLLAHDFKLPFRKWHSCNPLAL
FDAEIEKYCPENYVDIKRTLEREVQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQV
FRARFSEITLHAVRRACENLTQPDQKTSDAVEVRQELDLRIGAAFTRFQTLRLRKIFPDI
LADQLISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHDHDEGNVVFNWKRNRLFNH
TACLVLYHMCMEDPVATVVEVGSKPKSKWRPLPLDTVELEKLASRKLKINAKETMRIAEK
LYTQGFISYPRTETNIFPKELNLSALVQHQTQDPSWGAFAQRILDQGGPTPRNGTKSDQA
HPPIHPTKYTANLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANERFIAQGLMIL
ARNYLEVYPYEKWSDKVIPLYQKGSRFQPTTVEMVDGETSPPLLLTEADLIALMEKHGIG
TDATHAEHIETIKTRMYVGLTADQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLK
LICEGKKDKSLVLQQQVQKYKQVFIEAVARANKLDQALAQYFGEATEIAEQEEVYPAMPV
SIRKCPQCNNDMVLKTKKNGGFYLSCTGYPACKTAVWFPDFVLDVAKDESICAVCKPHPV
HRLKFKFKRGSVPPTMPLDFVGCVGGCDEMLKELLDLRYSNRSSQSGQSASQQANQLQVN
NSFNRANSDNRHVGGTTNMATGHLLYLSSTRAPRPAPSAAPDDGSNAVVCNCGNEAMLLT
VRKEGPNQGRQFYKCSANTCNFFLWSDQQSEDRSNAAPRGSAPPEAFGARGPANSQRPGG
KRGPEHFGSSNNSSSGGSTVCRCDQPAVTRTVQKDGPNKGRQFHTCSKPREQQCGFFQWA
DESVAPGASGDFSFNHFGSSGYSRELGSKAKRPSNLSQGATAKKPRTCSICHQPGHTKKT
CPLDH
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgggccgtcctctgcgtgcgggttaaaaactgcctgggaggatgcagggagcgt
gatgtggggaagggagaacgtatctggagcgctgcgctcagctctgggcccacagccctc
agtgggaggaccagcccaggagagaggaagcagcgctatgccttggtgccttgggagctg
tcacagttacctgtgatgaactttcaagccaggcttcttgctagctgtggggtcaggatg
ctgcctcagccttggcgcagcttttcacgggctgcggagggtccagcagtgcagaggatc
cggaaggtcctgtgtgtagctgagaagaatgatgctgcccgaggaattgcagatctgctc
tctaacagcagaatgcggcggagagaagggttttccaagttcaacaagatctacgaatac
gactaccagatgtttggccagaacgttactgtggtgatgacatccgtgtcaggacacttg
ctggctcatgatttcaagctgccgtttcgcaaatggcatagctgtaaccctctagctctc
tttgatgctgaaatcgagaaatattgtcctgagaattatgtggatattaagagaaccctg
gaacgagaggtgcagcagtgccaggctctggtcatctggaccgactgcgatcgagaagga
gagaacatcggttttgagatcattcatgtttgcaaagctgtgaagccaaacctccaggtg
ttccgagcacgtttttcagagatcacacttcatgctgtcagaagggcctgtgagaatctc
acccaaccagatcagaaaaccagtgatgctgttgaagtcaggcaggaactggacctcagg
ataggtgctgctttcaccagattccagaccctgaggctccggaagatcttccctgacatt
ttggcagaccagctgatcagctatggcagttgccagttcccaactctggggttcgtagtt
gagcgctttaaagccatccaggcctttgtccctgaagccttctataaaatcaaagtgaca
cacgatcatgacgagggcaatgtggtcttcaactggaagaggaaccggctctttaatcac
acagcgtgcctggtcctttaccacatgtgtatggaggatcctgttgccactgttgttgag
gttggaagcaagccaaagagcaaatggaggcccctgcccctggacacagtggaacttgag
aagttggcttcccgcaaactgaaaataaatgcaaaggaaaccatgagaatagcagaaaaa
ctctatactcaagggtttattagctacccccgaacagagaccaacattttccccaaggag
ctgaacctctctgccttagtacagcatcaaacacaggaccccagctggggagcatttgca
cagaggatcttggatcagggtgggccaactcctcggaatggaaccaaatcagatcaggct
caccctcccattcatcccacaaaatacactgctaacctgcagggcaatgaacagagacta
tatgaattcatcgtgcgccattttttggcttgctgctctcaagatgccaagggacaagaa
acaactgtggagattgacattgctaacgagcgattcattgctcaaggacttatgatcctg
gcccgaaattatctggaagtttatccttatgagaagtggagtgacaaggttatcccactg
tatcagaaagggtctcgctttcagcccactacagtggagatggtggatggggaaaccagc
cctccattgctcctcacggaagcggatctcattgcactcatggagaaacatggcattggg
accgatgccactcatgcagagcacattgagacaattaagacacggatgtatgtggggctc
acagcagatcagaggttcctcccaggccacctgggcatggggctggttgaaggctacgat
tccatgggctatgagatgtccaagcctgaccttcgagccgagctggaggctgatctgaag
ctgatctgcgagggaaagaaagacaaatctctggtgttgcaacagcaagtccaaaagtat
aaacaagtcttcattgaggctgtggccagagccaacaagctggaccaggccctggctcag
tattttggagaagccacagaaattgcagagcaagaggaagtctacccagcaatgcccgtt
tccattcggaagtgtccccagtgcaacaatgacatggtcctgaagaccaagaagaatggc
gggttctatctcagctgcacgggatatccagcttgtaaaactgctgtgtggtttcctgat
tttgtgctggatgtggccaaggacgagagcatctgtgctgtgtgtaaaccacatccagtt
cacagactgaagtttaaatttaagagaggcagtgttccacccacgatgcccctggacttt
gttggctgcgttggaggatgcgatgagatgctgaaagagcttctggacctgaggtactca
aacagatcatcccaatctggacagtcagccagccagcaggccaaccagttgcaggtgaac
aactccttcaacagagcaaacagtgacaacaggcatgtaggaggtaccacaaacatggca
acaggacatctgctgtacttgagttccacaagggcacccaggcctgctccttcagctgct
ccagatgatggcagtaacgcagtggtgtgcaactgtgggaacgaagccatgctgttaact
gtgcgcaaggaagggcccaatcaaggcagacagttctacaaatgcagtgccaatacctgc
aactttttcctctggtctgatcaacagtcggaggacagaagcaatgcggctccacggggc
tctgcaccacccgaggcctttggggcaaggggccctgcaaattctcagagaccaggagga
aagagaggcccagaacactttggaagcagcaacaactccagttcaggaggcagcacagtc
tgcaggtgcgaccagccagctgtcacacgcacggtccaaaaagatggccctaacaaaggg
cggcagttccacacgtgctccaaacccagagagcagcagtgcggcttcttccagtgggct
gatgaaagcgtggctccaggagcttctggagatttctcttttaaccactttgggagcagt
ggatactcaagggagttgggaagtaaagctaagagaccaagcaatctctcccaaggagca
acagccaagaaaccacggacctgtagcatttgccaccagcctggccacactaagaaaact
tgtcctctagatcactga
DBGET
integrated database retrieval system
