Tympanuchus pallidicinctus (lesser prairie-chicken): 128079275
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Entry
128079275 CDS
T08967
Symbol
SHMT1
Name
(RefSeq) LOW QUALITY PROTEIN: serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai00260
Glycine, serine and threonine metabolism
tpai00630
Glyoxylate and dicarboxylate metabolism
tpai00670
One carbon pool by folate
tpai01100
Metabolic pathways
tpai01200
Carbon metabolism
tpai01230
Biosynthesis of amino acids
tpai01240
Biosynthesis of cofactors
tpai04981
Folate transport and metabolism
Module
tpai_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
128079275 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128079275 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128079275 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
128079275 (SHMT1)
Enzymes [BR:
tpai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
128079275 (SHMT1)
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Paralog
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
128079275
NCBI-ProteinID:
XP_052536252
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All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MRGSGEHLQGWQGGQGDLGPGAGEVGGSRVRRARRSPRPGQGQPACRQRHRPRLSAGHGE
XGRGRSAPRIGRKVVAKFFVRALIGRELQGCDPAAYARRAGCRGAAERAGIGIRIGGIRG
GGQMANVTEGAGSLPSAELWASHSKMLLEPLESNDPEVYNIIKKEKQRQRLGLELIASEN
FASCAVLEALGSCLNNKYSEGYPGQRYYGGTEFVDELERLCQKRALQAFRLDPQKWGVNV
QPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSVFFESMPYKVN
PKTGYIDYDRLEENARLFHPKLIIAGVSCYSRNLDYARMRQIADANSAYLMADMAHISGL
VAAGVVPSPFEHCDVVSTTTHKTLRGCRAGMIFYRKGIRSTDPKTGKETLYNLESLINQA
VFPGLQGGPHNHAIAGIAVALQQAMTPEFKAYQQQVVANCKTLAAALMELGYNIVTGGSD
NHLILLDLRSRGTDGGRAERVLELCSIACNKNTCPGDVSALRPSGLRFGTPALTSRGFRQ
DDFRMVARYIHKGIELTLRVQKDMSPKATLKEFKEKLEEEKYRGELKALKEEVEAFAATF
PLPGLPVL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcagcggggagcacctccagggctggcagggaggccagggggatctcggcccc
ggtgctggggaagtgggcggctcccgcgtgcgcagggcccggcgcagcccccggcccggc
caaggtcaacccgcgtgccggcagcgccaccggccccgcctgagcgcgggtcatggggag
ncggggagggggcggagcgcgccgcggattggacgaaaagttgtcgcaaagttcttcgtt
cgggcgctgattggtcgagagctgcaggggtgtgacccggcagcctatgctaggcgcgcg
ggctgccgcggggcggctgagcgggccgggatcgggatccgtatcggtggcatcagaggc
ggtggacagatggcgaacgtgacagagggtgctgggagcctccccagcgcagagctctgg
gcctcccacagtaagatgctactggagccacttgagagcaatgaccctgaggtgtacaac
atcatcaagaaggagaagcagcggcagaggctggggctggagttgattgcgtcagagaac
tttgcgagctgcgcagtcctggaggcactgggatcctgcttgaacaataaatactctgaa
ggctaccctggacagaggtactacggtgggaccgagtttgtagatgagctggaaaggctg
tgccagaagcgagccctgcaggcattccgcctcgatccccagaagtggggtgtcaacgtc
cagccctactcagggtcacctgctaactttgcggtgtacacggccctggtggagccccat
ggcagaatcatggggctggacctgcccgatgggggtcatctaacccacgggttcatgacg
gacaagaagaagatctctgccacctctgtcttcttcgagtccatgccctacaaggtgaat
cccaagactggttacattgactacgaccgacttgaggagaatgcccgtctgttccacccc
aagctgattatagcaggtgtcagttgttactcacgcaacctggactatgcccgcatgcga
cagattgccgacgccaacagcgcctacctgatggccgacatggcccacatcagcgggctg
gtggccgcgggcgtcgtgccctcaccgtttgaacactgcgacgttgtctccaccaccacc
cacaagaccttgaggggctgcagggccggcatgatcttctatcgcaaaggcatccgcagc
acggaccccaagacaggaaaggaaacactctacaacctggagagcctcatcaaccaagcg
gtcttccctgggctgcagggagggccacacaaccatgccatcgcagggattgctgtggca
ctgcagcaggctatgactcccgagttcaaggcttaccagcagcaggtagtggccaactgc
aagacactggcagcagcgctgatggaactgggctacaacattgtaacagggggctctgac
aaccacctcattctcctggacctgcgcagcagaggtacagacggtggccgggctgagcgg
gtgctggaactctgctccatcgcctgcaacaagaacacatgccctggtgatgtcagtgcc
ctccgtcccagcggtctgcgtttcgggacaccagctctcacctcccgtggctttcggcag
gatgatttccgcatggtggctcggtacatccacaaaggcatcgagctgacgctgcgtgtg
cagaaggacatgagccccaaggccacgttgaaggaattcaaggagaaactggaggaggaa
aaataccggggagagctaaaggcactgaaggaagaggtggaggcatttgcagcaaccttc
ccactcccaggactgccagtcctgtaa
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