Tympanuchus pallidicinctus (lesser prairie-chicken): 128079383
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Entry
128079383 CDS
T08967
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03082
ATP-dependent chromatin remodeling
tpai03083
Polycomb repressive complex
tpai04110
Cell cycle
tpai04330
Notch signaling pathway
tpai04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128079383 (HDAC2)
03083 Polycomb repressive complex
128079383 (HDAC2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128079383 (HDAC2)
04350 TGF-beta signaling pathway
128079383 (HDAC2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128079383 (HDAC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128079383 (HDAC2)
Enzymes [BR:
tpai01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
128079383 (HDAC2)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
128079383 (HDAC2)
HDAC complexes
Sin3A-HDAC complex
128079383 (HDAC2)
BRAF-HDAC complex
128079383 (HDAC2)
REST complex
128079383 (HDAC2)
SHIP complex
128079383 (HDAC2)
MiDAC complex
128079383 (HDAC2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
128079383 (HDAC2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
128079383 (HDAC2)
Chromatin remodeling factors
NuRD complex
128079383 (HDAC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
128079383
NCBI-ProteinID:
XP_052536491
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDNSGEKADTKGA
KSEQLSNP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagtcagggtggcggcaagaagaaagtctgctactactacgacggtgatatt
ggaaactattactatggacaagggcatccaatgaaacctcataggatccgaatgacacac
aacttgctcctaaattatggcttgtacagaaaaatggaaatttaccgaccccacaaagct
actgctgaggaaatgaccaagtaccatagtgatgaatacatcaaatttctcagatcaata
aggcctgacaatatgtctgagtacagcaagcagatgcaaagatttaatgttggagaagat
tgtcctgtatttgatggcctgtttgagttttgtcagctatcaactggaggttctgttgct
ggggcggtaaaactgaacagacagcagacagacatggctgttaattgggctggaggactt
caccatgctaagaagtcagaggcatctggtttttgttacgtcaatgatattgtgcttgcc
atccttgaattactgaagtatcaccaaagagtgttgtatattgatattgatatccatcat
ggtgatggtgttgaagaagcattttataccacagatcgtgtcatgacagtatcattccat
aagtatggtgaatattttccaggcacaggggaccttagggacattggtgctgggaaaggc
aaatactatgctgtcaactttccaatgagggatggtatagatgatgaatcatatggacag
atattcaaaccaattatatcaaaagtaatggagatgtaccagcccagtgctgtagtatta
cagtgtggagcagattcattgtctggtgataggttgggatgctttaatcttactgttaaa
ggtcatgcaaaatgtgtggaagttgtaaagactttcaacttgccattgctgatgttagga
ggaggtggatatactattcgcaacgttgctcgatgctggacatatgaaactgctgttgcc
ttagattgtgaaattcctaatgaattaccatacaatgattactttgagtattttggacca
gacttcaagctccatattagtccatcaaatatgactaatcagaatacaccagaatatatg
gaaaagatcaagcaacgcttatttgaaaacttgcgcatgttacctcatgcacctggtgta
cagatgcaggccattcctgaagatgctgttcatgaagatagtggagatgaggatggagaa
gatccagacaaacgcatttcaattcgagcatctgataagcgcattgcctgtgatgaagag
ttttcggactctgaagatgaaggggaaggcggacggcgaaatgttgcagatcacaagaaa
ggagcaaagaaagctaggatagaggaagacaaaaaagagacagaggacaaaaaagcagat
gttaaggaggaggataaatctaaggacaacagtggtgaaaaggcagacaccaaaggagca
aaatcagaacagctcagcaatccttga
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integrated database retrieval system
