Tympanuchus pallidicinctus (lesser prairie-chicken): 128079501
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Entry
128079501 CDS
T08967
Symbol
FBXL13
Name
(RefSeq) LOW QUALITY PROTEIN: dynein regulatory complex subunit 6
KO
K10279
dynein regulatory complex subunit 6
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128079501 (FBXL13)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tpai03037
]
128079501 (FBXL13)
Ubiquitin system [BR:
tpai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128079501 (FBXL13)
Cilium and associated proteins [BR:
tpai03037
]
Motile cilia and associated proteins
Nexin-dynein regulatory complex
128079501 (FBXL13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box-like
DUF7627
LRR_8
Motif
Other DBs
NCBI-GeneID:
128079501
NCBI-ProteinID:
XP_052536750
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
RPGAAPPSRPVATRPRRLAAVAALRSGGPELRSYLRRHGLVQIYEVKASARPDAGGRGPR
LRCRVGTRVKKLPYLCIDSSLHPKLRRISETHLDTLFGVDTQLVKIIKYIIGWIKYNLLK
KNKRKKAEQKMALAVVRYDIQILKTVXHEWSMWSDSNDLTIKHKTXFTEKALLQIFHLLS
CYVNIVDLARCAQVSQAWMLVTPNSSLWSEXINFSSVKRKVQNRIVVNILQKRRPYVLYL
NLQGSLKYSLHWPSFITISECRNLQDLNLSECQGLNDESMGLISEGCRXLYLNLPYTHIT
NGTLQLLSRSFPNLQYFSLAHCRKYTDKGLQYLGTGTGCHRLIYXDLSGCVQISVDGFRN
IGNGCSGIQDLPISEMPPLTDRCTKALVEKCQQITSAVFLDSPHLSDTTFKALTECKLVK
VRIKGNNQITDLSFKMMSKYCQYKMHIHFAGCQKITDAGLKMISKLKYTLVLNVADCVRI
SNGGVWPFVXGSSGAELSELNLANCIHATDASVKEIAQRCHQXTYLNLHHCKNVTDAGIE
ALGNMLSVISIDLSGTCISDMGLRALGHHGKIKQLSLLECKNINDTGIQVFCKGTKQLEY
SHVSCCHQVTDEAVKALAFHCHKLTSVSIADCPKITDTCIQYLATACNYLHFLDISGCIN
LIDKALKCLWKGCKHLQILKMLYCRNITKQAALKYTAKLEQQDQRNADPPSWLGYDRDGN
IPSPKSTSENLVEXILQK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
aggcccggggcagcacctccatcccggcccgttgctacgcgaccgcgacgccttgcggcc
gtggctgccctgcgaagcggcggccccgagcttcgctcctacctgaggcggcacggactc
gtccagatctacgaggtaaaggcctctgcgcggcctgacgcaggtggacgtgggccgcgt
ctcaggtgccgtgttgggaccagagtaaagaagcttccatatctgtgtattgattcatct
ttacacccaaaattaaggaggatttcagaaactcacctggacacactttttggagtagat
acacaactggtaaaaatcatcaaatatattataggatggataaaatacaatttgctgaaa
aagaacaaaagaaaaaaggcagagcagaagatggctctggcagtagttcgttatgacatc
caaatattaaaaacagttnnacacgagtggagcatgtggtctgattcaaatgatcttacc
atcaaacataaaacanntttcacagaaaaagccctattacagattttccatctactttcc
tgttatgtaaatattgttgatctagcaagatgtgctcaagttagtcaagcctggatgcta
gtaactccgaacagttcgttatggagtgaataaatcaatttttcatcagtaaagcgtaag
gttcagaacagaatagtagtgaatatattgcagaagaggcgtccttatgtactgtacttg
aaccttcaaggttctctcaagtattctcttcactggccaagctttataaccatcagtgaa
tgtaggaacttgcaagatttaaatctctctgaatgtcaggggttgaatgatgaatcaatg
ggactcatatctgaaggctgcaganntctctacttaaatttgccatatacacatattact
aatggaacactacaacttttgtcaaggagctttcccaatttgcagtacttcagtttagct
cactgcagaaaatacacagacaaaggtttacagtacctgggcactggcacaggatgtcac
aggctcatctatntggacctttcaggttgcgttcagatttctgttgatggcttcagaaat
attggcaatggctgcagtgggattcaagatttgccaatcagtgaaatgccacctcttaca
gacagatgtacaaaggctctggttgaaaaatgtcaacaaataacatctgcagtgtttctt
gactctccacatctttctgatacaacttttaaagcccttactgaatgtaaacttgttaaa
gtcaggattaaaggaaataaccaaattactgacctgagtttcaagatgatgagtaaatac
tgccaatacaagatgcacattcattttgctggatgccagaagataacagacgctggtctt
aaaatgatttcaaaactgaaatatactcttgtcttaaatgtggcagactgcgtaagaatc
agcaatggaggtgtatggccatttgtatgaggttcttcaggagctgagctgagtgagctg
aatttggctaactgtatccatgccactgatgcttctgtcaaagaaatagcacaaagatgt
catcaantgacctaccttaatctacatcactgtaaaaatgtgactgatgctggaattgaa
gctttgggaaatatgttgtcagtgatatctattgatctctctggaacctgcatctcagat
atgggtttgagagcccttggccaccatggaaaaatcaagcagctttctctattggaatgt
aaaaacattaatgacactgggattcaggtgttctgcaaaggcactaagcagctggaatac
agtcatgtgtcctgctgccatcaggtgacagatgaagctgtgaaagctttggcatttcat
tgccacaaactgacatctgtcagcatagctgattgtccaaagatcactgatacctgtatc
cagtacttggccacagcttgcaattatctccacttcttagacatctcaggttgcattaat
cttattgacaaagcactgaaatgtctttggaaagggtgtaagcatctccagattctcaag
atgctctactgtagaaatattaccaaacaagctgccttgaaatatactgccaaactggag
caacaagaccaaaggaatgctgaccctccttcctggctcggctatgacagggatggtaac
ataccttcaccaaaaagcacaagtgagaacctggttgaatgaattcttcaaaagtag
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