Tympanuchus pallidicinctus (lesser prairie-chicken): 128079677
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Entry
128079677 CDS
T08967
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04510
Focal adhesion
tpai04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128079677 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128079677 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
128079677
NCBI-ProteinID:
XP_052537071
LinkDB
All DBs
Position
Unknown
AA seq
1785 aa
AA seq
DB search
MGRLPLYLCCCLALRVAVAQEPEYSYGCAEGSCYPATGDLLIGRAARLSASSTCGLRQPE
PYCIVSHLQEDKKCFICDSEDPFHDTLNPDSHRIENVVTTFAPNRLKLWWQSENGLENVT
IQLNLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWQVYRYFAYDCESSFPGISTGPM
KKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFTKLHT
LGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVEGFNEEVEGMVHGHCMCRH
NTKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNGHSAQCHFDMAVYMATGNTSGGVC
DDCQHNTVGRNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGICDRYTDFSTGLI
AGQCRCKLFVEGERCDLCKEGFYGLSADDPAGCQSCACNPLGTHPGGNPCDSETGNCYCK
RLVTGKQCNLCLPEHWGLSNDMDGCRPCDCDQGGALHNNCSSESGQCECRPHMFGRQCNQ
VEPGYYFISLDHYIYEAEEANLGPGVNIIERQSTQDRTPSWTGVGFVRVPEGAHLEFYID
NIPYSMEYDIVIRYEPQLPDQWEKAVITVSRPGKIPAGSRCGNTVPDDDNQVVSLPPGSR
YVVLPRPVCFEKGLNYTIRLELSQYSLVESEMENPYTLIDSLVLMPYCKSLEIFTVGGSG
EDVVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCDPQGSLS
SVCDPNGGQCQCRPNVVGRQCNRCAPGTFGFGPSGCRPCECHLRGSYNSFCDAETGQCHC
FPGVYGRQCDRCLPGFWGFPSCQPCHCNGHADDCSPYTGECLHCRDHTAGPNCERCEAGY
YGDPILGSGDHCRPCPCPDGPESGRQFASGCYQDPVTLQVVCVCSTGYIGSRCDECASGF
FGSPDEVGGACQPCQCNNNIDSTDPEACDKRTGTCVKCLYHTEGENCHLCRQGYYGSALQ
QDCRKCVCNYLGTVREDCDDAENCRCEAATGQCRCLPGVVGQTCDRCAPHTWRLASGTGC
EPCDCDAARSLGPACNEFTGQCHCMPGFGGRSCRECQEHFWGDPNVECQACDCNPRGIQT
PQCDRATGRCICNEGVEGPRCDKCSRGYSGFFPDCVPCHQCFALWDVIVGELTNRTQQFL
DRANALKITGVVGPYQQTLSTLEEKLGEIKAIIAQNPAAEPLKNIGNLFEEADKLTADVT
IKIADIEASLSTLAEKSNSTDADLSALETDAKSLDRVVKELAEQLEFIKISDVRGALDSI
TKYFQMSLEAEERVNASTVHPESTVELSAQTRQEVEDLINEKEAQFKAKQEEQSRLLDEL
AGKLQSLDLAEASAKMCGTPVGASCAESECGGLHCRTAAGQRKCGGPGCDGLVTVAHNAW
QKAMDFDRDILSALAEVEQLSRMVSEAKQRADEAKQNAQEVLLKTNATKEQVDRSNEDLR
NLIKQIRDFLMQDSADLDSIEAVANEVLNMEMPSTPQQLQALTEDIRERVESLSDVEVIL
QQSAGDIARAEMLLEEAKKASKGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDIK
GTQDLLTSIQSENAASEETLNNATLRLFALERSVEDLKQKAATNSENVGNIEEKIVSAKQ
NAEEVKQVLDTELNSKYKTVEDLITKKTEESADARRKAGMLQEEAKALLAQANSKLQLLK
ELENTYENNQKVLEDKAKQLVELEETVRSLLQTISQKVAVYSTCL
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcctcccgctctacctctgctgctgcctcgcgctccgggtcgcggtggctcag
gagcccgagtacagctacggctgcgccgagggcagctgctaccccgccaccggcgacctc
ctcatcggccgcgccgcccgcctctccgcctcctcgacgtgcggcctccgccagccagag
ccctactgcatcgtcagccacctccaggaggacaaaaaatgtttcatatgcgattctgag
gaccccttccatgacactctcaatcccgacagccatcgcattgagaacgtggtcaccaca
ttcgctccaaatcgtctgaagctttggtggcaatcggaaaatggtctggagaatgtgaca
atccagctgaacctggaggctgagtttcatttcactcatctcatcatgaccttcaagaca
ttccgccccgctgcaatgctgatagaaagatcatctgactttggaaaaacatggcaagta
tacaggtattttgcatatgactgtgagagctcatttcctgggatttcaactggacccatg
aagaaggtggatgatatcatctgtgattcccgatactccgacattgagccttcaactgag
ggagaggtcatatatcgtgttttagatcctgctttcaggattgaagatccatacagtcca
agaattcaaaacctgttgaagatcacaaatctaagagtcaagttcaccaagctgcacacg
ctgggagataacctcctggattcgaggatggagatcagggagaagtactattatgccatt
tacgacatggtggtgcgcgggaactgcttctgctacggccacgccagtgagtgcgcgccg
gtagagggcttcaacgaagaagtggaaggaatggtccacgggcactgcatgtgcaggcat
aataccaagggcttgaattgtgagcagtgtttggatttctaccacgacttaccttggcga
cctgccgaaggccgcaatagtaacgcatgcaaaaagtgtaattgcaatggccactctgca
cagtgccacttcgacatggccgtgtacatggcgacagggaacaccagcgggggggtgtgc
gacgactgccagcacaacacggtggggcgcaactgcgagcagtgcaagcccttctacttc
cagcacccagagagagacctgcgggaccccgacgtctgcgagccttgtaattgtgaccca
gctggctcccaaaatggtggcatatgtgatcgctacacagacttctctacgggcctcatt
gctggccagtgccgctgtaaattattcgtcgaaggggaacgttgtgatctctgcaaagaa
ggtttctatggactcagtgccgatgacccagcgggctgtcaatcttgtgcatgtaatcct
ctgggtacccatcctggaggcaatccttgtgattcagagacaggaaactgctattgtaag
cgcctggtgacaggaaagcaatgcaatctgtgcctgcctgagcactggggcctgagcaat
gacatggatggatgtcgaccctgtgactgcgaccagggaggagcactgcataacaactgc
tcaagtgaatctggtcaatgtgagtgccggccccacatgtttggacgtcagtgcaaccaa
gtggagcctggatattacttcatctcgcttgaccactacatctacgaggctgaggaagcc
aacctgggtcctggagtaaacataattgagcgccagtccacacaggaccgcacgccgtcg
tggacaggcgtaggatttgtgagggtccctgagggggcacacctggaattctacatcgac
aacatcccctactccatggagtatgacatcgtgatccgctacgagccccagttgccagat
cagtgggaaaaagctgtgatcactgtgtcgcgcccaggcaagattcccgcaggtagccgg
tgtggcaacacggttcctgatgacgataatcaggttgtctcattgccacctggctccaga
tatgttgttctcccacggccggtctgctttgagaaggggctgaactacaccatccgcctg
gagctgtcccagtactccttggtggaatctgagatggagaacccctacacactcattgac
tctcttgtcctcatgccgtactgcaaatcactggaaatattcaccgtgggaggctcaggt
gaagatgtggtcaccaacagcgcttgggaaacgttccagagataccggtgtctggaaaac
agcaggagcgttgtgaaaaccccaatgacagatgtctgcaagaacatcatcttcagcatt
tctgcgctattgcacgagactgccttgtcctgccaatgtgacccccagggctcactgagt
tcagtgtgtgaccccaacggaggacagtgccagtgccgtcccaatgtggttggaagacag
tgcaacagatgtgcacccggcacctttggatttgggccgagcggatgcaggccttgtgag
tgccacctacgaggctcatacaactcattctgtgatgcggagacgggccagtgccactgc
ttccctggtgtgtatggacggcagtgtgaccgctgcctgcctggattctggggcttcccc
agctgccagccctgccactgcaatggccacgccgatgactgcagcccctacaccggggag
tgtctgcactgccgggaccacacggctggccccaactgtgagaggtgcgaggctggctac
tacggagaccccatcctgggctcaggtgaccactgccgcccctgtccttgccccgacggc
cctgagagtggacgccagtttgccagtggctgttaccaggacccggtcaccctgcaggtc
gtgtgtgtctgtagcacaggctacataggcagtcgctgtgatgaatgtgcgtctggcttc
tttggcagccccgacgaggtcggtggtgcctgccagccctgccagtgcaacaacaacatt
gacagcaccgatcctgaggcctgcgacaagaggacagggacgtgtgtcaagtgcctgtac
cacacagagggtgaaaactgccatctctgtaggcagggctactatgggagtgccctgcag
caggattgcagaaagtgcgtctgcaactacctgggcactgtgcgggaggactgcgatgac
gcggagaactgccgctgtgaggcggccacagggcagtgccgctgcctgcccggcgtggtg
gggcagacctgcgaccgctgcgcaccccacacctggaggctggccagcggcaccggctgc
gagccctgcgactgcgacgctgcccgctcccttgggccggcctgcaatgagttcacaggg
cagtgccattgcatgccgggcttcggaggccggagctgccgggagtgccaggagcacttc
tggggtgatccaaatgtggagtgccaagcttgcgactgcaacccccgcggcatccagacc
ccgcagtgtgaccgtgccacagggcggtgcatctgcaacgagggagtggaagggccgcgc
tgcgacaagtgctcccggggctactcgggcttcttccctgactgtgtgccctgccaccag
tgcttcgccctctgggatgtcatcgtcggcgagctgaccaaccgcacccagcagttcctg
gacagggcaaatgctctgaaaatcacaggggtcgtcggcccctaccagcagacgctcagc
accctggaagagaagctgggtgaaatcaaagccatcatcgctcaaaatccagccgctgag
ccactgaagaacattgggaatctctttgaggaagcagacaagctgacagctgacgttacc
attaagatagcggacatagaagcaagcctctcaaccttagcagagaagagcaatagcacc
gatgctgacctgagcgcgctggagacagatgctaaaagcctggatcgtgtcgtgaaggag
ctggcagaacagctagagttcatcaagatctctgatgttcggggagccctggacagcatc
accaagtatttccagatgtccctggaggcagaggaaagggtcaatgcttccactgtccac
cctgagagcaccgtggagctgtcagcacagacacggcaggaagtggaagacttaatcaat
gagaaggaggcccagttcaaggctaagcaagaggagcagtcgcgcctcctggatgaactc
gccggcaagctgcaaagcctggatctcgccgaagcatcagcaaagatgtgtggcacacca
gtgggagcctcttgtgctgagtcagagtgtggggggctgcactgccggactgctgcaggg
cagaggaagtgtggaggacctggctgtgatgggctggtcactgtcgctcacaacgcatgg
cagaaggccatggactttgacagagacatcctcagtgcgttggcagaagttgagcaactc
tccagaatggtttctgaagcaaagcagagagctgatgaagccaaacagaatgcacaagaa
gttctgctcaaaaccaacgctacaaaggaacaagtggacagaagcaatgaagatctgaga
aatcttattaagcagatcagagacttcctcatgcaagacagtgctgacctggacagcatt
gaggcagtggctaatgaagtgctgaatatggagatgcccagcaccccccagcagctgcaa
gcgctgacagaagacatccgtgaacgcgtggaaagcctttctgatgtcgaggtcattctg
cagcagagtgctggagacattgcaagagcagaaatgctactggaggaagctaagaaagca
agcaaaggtgcaacagatgttaaagtcactgcagacatggtgaaagcagcactagaggaa
gctgaaaaggctcaaaatgcagctgaaaaagccataaaacaagctgatgaagatattaaa
ggaactcaagacctgctgacctcaattcagtctgaaaacgccgcatctgaagaaacactg
aacaatgccactttacgtctgtttgcacttgagaggagcgttgaagaccttaagcaaaag
gctgctaccaattcagaaaatgtgggcaacatagaagaaaaaattgtttctgcaaaacag
aatgctgaagaagttaaacaggtcctcgacaccgagctgaacagcaagtacaaaaccgtg
gaggatctcatcaccaaaaagacagaggagtcggctgacgcgaggaggaaagccggcatg
ttgcaagaggaagcaaaggcattgctggctcaagccaacagcaagctgcagctgctcaaa
gaattggaaaatacatatgaaaacaatcagaaagttctggaagacaaagccaagcagctg
gtggagctggaagagacagttcgctccctcttacagacaatcagccagaaagttgctgtg
tacagcacctgcttataa
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integrated database retrieval system
