Tympanuchus pallidicinctus (lesser prairie-chicken): 128079762
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Entry
128079762 CDS
T08967
Symbol
ABCA2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai02010
ABC transporters
tpai04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128079762 (ABCA2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128079762 (ABCA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpai02000
]
128079762 (ABCA2)
Transporters [BR:
tpai02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128079762 (ABCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
Motif
Other DBs
NCBI-GeneID:
128079762
NCBI-ProteinID:
XP_052537232
LinkDB
All DBs
Position
Unknown
AA seq
2509 aa
AA seq
DB search
MGFLHQLHLLLWKNVTLKRRSPWVLAFEIFIPLVLFFILLGLRQKKPTIPVKEAFYTAAP
LTSAGILPVMQSLCPDGQRDEFGFLQYSNSTVTQLLEHLSEVVEQSNLFDPEHPGLEEEL
ESLRRRLEALSSSEPSSMETHFSSQAGSTFTLGWAAKDRGELHRFLTQNLSLPNGTAELL
LGSSVDLREVYRLLFGASPLAPDDTHERDTWDRFGHGEKMAQLEKSLPSGWKSLREGLVH
RALRDPSAALQRPALLRLLSQALGLASAAAAPAGSYSPQTFVAEMERILFTAPVLEQLTC
EQSSGTLRRLLRVAPSQQPLLQAYRVLACNGSRAAREERFAQLAAELRDQMDTPKIVSRL
QLDEVNSTAAQHRLRALLEDLVEMEKVLRDMDILSALARLLPRGACAAKAPLPTANSTGW
AGTNATASNTTMEEEGAGGDPAGSDNPQGQFSAFVQLWAGLQPILCGNNRTIEPEALKQG
NMSSLGFTSKEQRNLGLLVHLMTSNPKILYAPVGTEVDKVILKANETFAFVGNVTHYAKV
WLNISPEIRAYLEEGRLQRRIRWLQQFTADLHKHPEILNVSDSDLLHSFLNGNFSLPNAS
VLLQQLDTIDNAACGWVHFMAKVSVDIFKGFPDEESIVNYTLNQAYQDNVTVFASVIFQT
NKDGSLPPHVMYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFLYGFVWIQDMMERALI
NTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMMIQHIVTEKE
HRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGKVLMHSDVLIIWLFLAI
YAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCIAS
LMSTTAFGLGSKYFALYEVAGVGIQWHTFSQSPVEGDDFNLLLSMMMLIIDAVVYGVLTW
YIEAVHPGMFGLPRPWYFPFQKSYWLGNGRVETWEWTWPWSRTTRLSIMEEDQACAMESR
RLEETRGIEEEPTHLPLVVCIDKLTKVYKTDKKLALNKLSLNLYENQVVSFLGHNGAGKT
TTMSILTGLFPPTSGSATIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSQL
KSMAEEEIRKEMDKMIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTA
GVDPYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKST
YGDGYKLTVVKRQSDTRNSTESGQPHSPPGHSSVSPCSEPRVSQFIKKYVASCLLISDTN
TELSYILPSEAVKKGCFERLFQHLEQSLEELDLTSFGLMDTTLEEVFLKVSEEDQSLENS
DVDMKESKKDVLQPPVPELDLKPEANREPLEEVDVPEKPEVELSNLVTCSKLAQSQASLR
SASSVGSVRGDEGGAYSEFFGDYSPLFDNRQDPDNISLQDQEADVEAEDHDLAGQGSFKL
EGSWLKLRQFHGLIVKRFHCAKRNTKALFSQILLPAFFVCVAMTVALSVPEIGDLPPLIL
SPSQYHNYTQPKGNFIPYANEERREYRLRLSPDASPQQLVNTFHLPSGVGATCVLKTAFN
NTLDQPMQTLNLNSNESKMLAAKYFDAMCIDSFTQGLPLSNFVPPPPSPAPSDYPVSMDE
DLLRAWNSTTFSTIKETITSAPSLPHIIHEPIRCTCSMQGTGFSCPSGVGGHPPQMKVVT
GDILADITGRNVSEYLLYTSDRFRLHRYGALTFGNVQKSIPASFGARAPATVRKIAVRRT
AQVFYNNKGYHSMPTYLNALNNAILRANLPKSKGNPAAYGITVTNHPMNKTSASLSLDYL
LQGTDVVIAIFIIVAMSFVPASFVVFLVAEKATKAKHLQFVSGCDPVIYWLANYVWDMLN
YLVPATCCIIILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSSAYVF
LIVINLFIGITATVATFLLQLFEHDKDLKLVNSYLKSCFLVFPNYNLGHGLMEMAYNEYI
NEYYAKIGQFDKMKSPFEWDIVTRGLVAMTIEGFVGFFITIMCQYNFFRKPQRLPVSTKP
IEDDIDVANERHRVLRGDADNDMLKIENLTKVYKSRKIGRILAVDRLCVGVRPGECFGLL
GVNGAGKTTTFKMLTGDESTTGGEAFVNGHSILKELLQVQQSLGYCPQFDALFDELTAQE
HLELYTRLRGIPWKDEERVVKWALKKLELTKYADKPASTYSGGNKRKLSTAIALIGYPAF
IFLDEPTTGMDPKARRFLWNLILDVIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLKCL
GSIQHLKNRFGDGYMITVRTKSSLNVKEVVRFFNRNFPEAILKERHHTKAQYQLKSDQIS
LAQVFSKMEQVVDVLGIEDYSVSQTTLDNVFVNFAKKQSDNLEQQETSPSCALQSPWERV
LSLLRPRAAPTELRALVVEEQEDLETDDEGLISFEEERAQLSFNTDTLC
NT seq
7530 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctgcaccagctccatctcctgctctggaagaacgtgacgctgaagcggcgc
agcccgtgggtgctggccttcgagatcttcatcccgctggtgctattcttcatcctcctg
gggctgaggcagaagaagccgaccatccctgtgaaggaagctttctacacggcggccccg
ctcacctcggccgggatcctgcctgtcatgcagtccctgtgtcctgacggccagcgcgat
gagtttggcttcctgcagtactccaactccacggtgacacagctcctggagcacctcagt
gaggtggtggagcagagcaacttgtttgacccggagcacccaggcctggaggaggagctg
gagtccctgcgtcggcgcctggaggccctcagcagcagcgagcccagctccatggagacc
cacttcagcagccaggcaggatctactttcacactggggtgggcggctaaggaccggggg
gaactgcaccgcttcctcacgcagaacttgtccctccccaatggcacagccgagctcctc
ctgggctccagcgttgacctgcgggaggtgtaccgcctgctgtttggggcctctcctttg
gcacctgatgacacccacgagcgagacacgtgggatcggtttggacacggtgagaagatg
gcacagctggagaagagccttcccagtggctggaagagcctgcgggagggactggtccac
agggccctgcgcgatccctctgcagccctgcagcggccagcactgctccgcctgctgtcc
caggccctgggcctcgccagtgccgccgcagctcccgctggttcctacagtccccagacc
tttgttgccgagatggagcgcatcctcttcacggcaccggtgctggagcagctgacgtgt
gagcagagctcggggacgctgcgccgcctcctgcgtgtggctcccagccagcagccgctg
ctgcaggcgtaccgcgtgctggcgtgcaatggcagccgggcagcccgcgaggaacgcttt
gctcagctggctgccgagctgcgggaccagatggacacccccaagattgtcagcaggctg
cagctggatgaggtgaacagcacagcagcccagcaccggctccgcgccctcctggaggac
cttgtggagatggagaaggttctccgtgacatggacatcctctcagcgctggccaggctc
ctgcccaggggggcctgtgctgccaaggctccgctgcccacagccaacagcactggctgg
gccggcaccaatgccactgccagcaacaccacgatggaggaggagggtgccgggggggac
ccggcgggcagcgacaacccccaggggcagttctcagcctttgtgcagctctgggctggg
ctacagcccatcctctgcggcaacaaccggaccattgaacccgaggcgctgaagcagggc
aacatgagctctctgggcttcaccagcaaggagcagcgaaacctgggccttcttgtgcat
cttatgaccagcaaccccaaaatcctgtatgcacccgtgggtactgaagtggacaaggtc
atcctgaaggccaatgagacctttgccttcgtgggcaacgtcacccactatgccaaggtg
tggctgaacatctcccccgagatccgagcctacctggaggagggcagactgcagagacgc
atccgctggctgcagcagttcactgctgacctccacaagcacccagagatcctgaacgtc
tccgacagtgaccttctgcacagctttctcaatggcaacttctccctgcccaacgccagc
gtcctgctccagcagctggacaccattgataatgctgcctgcggctgggtccacttcatg
gccaaggtcagcgtggacatcttcaagggcttcccagatgaggagagtatcgtcaactac
acgctgaaccaggcctaccaggacaatgtcacagtctttgccagtgtgatcttccagacc
aacaaggacggctcactgcccccacatgtcatgtataagatccggcagaattccagcttc
acggagaagaccaacgagatccggcgggcgtactggcggcccggtcccaacactggtggc
cgtttctatttcctctatggctttgtctggattcaggacatgatggagcgtgccctcatc
aacacctttgttggccatgatgtggtggaacctggaaactatgtgcagatgttcccatat
ccatgttacacccgggatgactttctcttcgtcattgagcatatgatgcccctgtgcatg
gtgatctcctgggtctactcagtggccatgatgatccagcatattgtgacagagaaggaa
catcgcctgaaagaggtgatgaagatgatgggcttgaacaatgcagtgcattgggtggct
tggttcatcaccggctttgtccagctctccatctcagtcacggcactcaccgccatcctg
aagtatggcaaggtcctgatgcacagcgacgtcctcatcatctggctctttcttgccatc
tacgctgtggcaaccatcatgttctgtttcctggtatcggtgctctactccaaagccaag
ctggcttctgcctgcggtggcatcatctatttcctcagctacgtgccctacatgtatgtg
gccatccgggaggaggtggctcatgacaagattactgcatttgagaagtgcatcgcgtct
ctcatgtctaccacggcatttgggctgggctccaagtactttgcactgtacgaagtggct
ggtgtgggcatccagtggcacaccttcagccagtcgcctgtggaaggagatgacttcaac
ctcctactgtccatgatgatgctgatcatcgatgctgtggtgtacggggtgctcacgtgg
tacattgaggctgtgcacccaggcatgttcggcctcccgcggccctggtacttccccttc
cagaagtcctactggctgggcaacgggcgagtggagacctgggagtggacgtggccgtgg
tcccgcaccacacgcctcagcatcatggaggaggatcaggcctgcgccatggagagcagg
aggctggaggagacacggggcatcgaggaggagccgacccacctccccttggttgtctgc
attgacaagctcaccaaggtctacaaaactgacaagaagctggcactgaacaagctgagc
ctcaacctctatgagaaccaggtggtgtccttcctggggcacaatggtgcaggcaaaacc
accaccatgtccatcctgactggcttattcccaccgacctcaggctcagctaccatctat
ggccatgatatccggacagagatggatgagatccggaaaaacctgggcatgtgtccccag
cacaacgtgctctttgacagactgacggtggaagaacacctctggttctactcacagctc
aagagcatggcagaggaggagatccgcaaggagatggacaagatgattgaggacctggag
ctctccaacaaacgccattccttagtgcagaccctctcagggggcatgaagagaaaactg
tcagtggccattgcctttgtgggtgggtcgcgggctgtgatcttggatgagcccacggct
ggagttgacccgtacgcacgcagagccatctgggacctcatcctcaagtacaagccaggg
aggaccatcctgctgtccacccatcacatggatgaggctgatttgctgggcgaccgcatc
gctatcatctcccatggcaagctcaagtgctgcggctccccactcttcctcaagagcacc
tatggcgatggctacaagctgacagtggtaaagaggcagtcggacaccaggaacagtaca
gaatctggccagccccacagtcctccaggccactcctctgtcagcccctgctctgagccc
cgcgtctctcagttcatcaagaagtacgtggcctcctgcctcctcatctcagataccaac
accgagctctcctacatcctgcccagtgaggccgtcaagaagggctgcttcgagaggctc
ttccagcacttggagcagagcctggaggagctggacctcaccagttttgggctgatggat
accacactcgaggaggtctttctgaaagtatctgaggaagaccaatccctggagaatagt
gacgtggacatgaaggagtccaagaaggatgtcctgcagccgcccgtccctgagctggac
ctgaagccggaggccaacagggagcctctggaggaggtggatgtgcctgagaagcctgag
gtggagctcagcaacctggtgacctgctccaagctagcgcagtcacaggcatccctgcgc
tcggcctcctcagtgggctccgtacggggtgacgaaggtggggcttattccgaattcttt
ggggattactctccgttgtttgacaatcgtcaggaccctgataacatcagtctgcaagac
caagaggctgatgtggaggcagaggaccacgatctggctgggcaggggagcttcaagctg
gagggctcatggctgaagctgcgccagttccacggactgatcgtcaagcgcttccactgt
gccaagcgcaacaccaaggccctcttctctcagatcctcctgcctgccttctttgtctgc
gtggccatgactgtggcactctctgtgcctgaaataggtgacctgccacccctcatcctc
tccccatcacagtaccacaactacacccagcccaagggcaatttcattccttacgccaac
gaggagcggcgtgagtaccgcctcaggctgtctcctgacgctagcccacagcagctggtg
aacaccttccacctgccttctggtgtgggggccacctgtgtgctcaagacagccttcaac
aacacactggaccagcccatgcagaccctgaacctcaacagcaacgagtccaaaatgctg
gcagccaagtactttgatgccatgtgcattgactccttcacccagggcctgccgctctcc
aacttcgtgccaccacctccatccccagcaccttccgactaccctgtctcaatggatgag
gacctgctgcgtgcctggaactccacaaccttctctaccatcaaagagaccatcacctct
gccccttccctgccccacatcatccatgagcccatcaggtgcacgtgctccatgcagggg
actggcttctcctgccccagtggtgtggggggccacccgccgcagatgaaggtggtgacg
ggggacatcctggcagacatcacagggcgcaacgtttctgagtacctgctctacacctcg
gaccgcttccggctgcacaggtatggagcactcaccttcggcaatgtccagaaatccatc
ccagcttcctttggggccagagctcctgccacggtgcgcaagatcgcagtccgaagaaca
gcccaggtcttctacaacaacaagggctaccacagcatgcccacctacctcaacgctctc
aacaacgccatcctgcgagccaacctgcccaagagcaaaggcaaccctgctgcctatggc
atcacagtcaccaaccatcccatgaacaagaccagcgccagcctgtccctggattacctc
ctgcaaggcacggatgtggtgattgccatcttcatcatcgtggccatgtcctttgtgccg
gccagctttgtggtgttcctggtggctgagaaggccaccaaggccaaacacctgcagttt
gtgagcggctgcgaccctgtcatctactggctggccaactatgtgtgggatatgctgaac
tacctggtgccagccacatgctgtatcattatcctgtttgtgtttgacctcccggcatac
acctctcccaccaacttccctgccgtcctctcactcttcctgctgtacggctggtccatc
acccccatcatgtaccctgcctccttctggtttgaggtgcccagctctgcctatgtcttc
ctcatcgtcatcaacctcttcattggcatcacagccaccgttgccacgttcctgctgcag
ctctttgagcacgacaaggatttgaagttggtgaacagctacctgaagagctgcttcctt
gtattccctaactacaacctgggccatggcttgatggagatggcctacaatgaatacatc
aatgaatactatgccaagatcgggcaatttgataaaatgaaatcacccttcgaatgggac
atcgtgacacgagggctcgttgccatgacaatcgaaggcttcgtcggcttcttcatcacc
atcatgtgccaatacaacttcttccggaagccccagcggcttccagtctccaccaaaccc
attgaagatgacatcgatgtggccaacgagcggcaccgcgtcctgcggggcgacgctgac
aacgacatgctgaagattgagaacctcaccaaggtctacaagtcccgcaagatcgggcgc
atcctggctgtggaccggctgtgtgtgggtgtgcggccgggggagtgcttcgggctgctg
ggcgtcaatggcgcggggaagacgaccactttcaagatgctgacaggggatgagagcaca
acggggggagaggccttcgtcaacgggcacagcatcctgaaggagctcctgcaggtccag
cagagcctgggctactgcccccagtttgacgcgctcttcgatgagctgacagcccaggag
cacctggagctctacacgcgcctgcgcggcatcccctggaaggatgaggagagggtggtg
aagtgggcgctgaagaagcttgaattgacgaagtacgctgacaagcctgccagcacgtac
agcggaggcaacaagaggaagctgtccacagccatcgctttgattggatacccagccttc
atctttctggatgagcctactacagggatggaccccaaggcacggcgcttcctctggaac
ctcatcctggatgtcatcaagacaggccgctccgtcgtgctcacatcccacagcatggag
gaatgcgaggcgctctgtacccgtctggccatcatggtgaatgggcggctgaaatgtctt
ggcagcatccagcacctgaagaacaggtttggtgatggctacatgatcacagtgcgcaca
aagtccagcctcaacgtcaaggaggtggtgaggttcttcaaccgcaacttccctgaggcc
atcctcaaggagaggcaccacactaaggcccagtaccagctcaaatcggaccagatctcg
ctggcacaggtcttcagcaagatggagcaggtggtggatgtgctgggcattgaggactac
tccgtcagccagaccaccctggacaacgtgtttgtgaattttgccaagaagcaaagcgac
aacctggagcagcaagagacgagccccagctgtgccctgcagtccccctgggagcgagtg
ctgagcctgctgcgcccacgggctgcgcccacagagctgcgggccctggtagtggaggag
caggaggacctggagacagatgatgaaggcctcatcagctttgaggaggagagggctcag
ctgtcgttcaacacggacacactgtgctga
DBGET
integrated database retrieval system
