Tympanuchus pallidicinctus (lesser prairie-chicken): 128079771
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Entry
128079771 CDS
T08967
Symbol
PRF1
Name
(RefSeq) perforin-1 isoform X1
KO
K07818
perforin 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128079771 (PRF1)
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Motif
Pfam:
MACPF
C2
Auts2
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
128079771
NCBI-ProteinID:
XP_052537263
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Position
Unknown
AA seq
663 aa
AA seq
DB search
MKSAPHCLAFSILLLFHHLPTICPQCHRAVGKSCHVPPAPGTNFLGSGLDVTTMSLTEGQ
VLAITKPTGRHCVVCVDQLHKGQSLLLYNGVSKWRAGSKCQQRSSLAAGSQSMRMLVAQT
EKRAQNWRVGLEAALIPGRGVTLAMAGSHSRVAEFGMQKEREDRYSFASTELRCVHYWIS
ASPKPRPSPHFLHAVRSLPPHFTPATAPDYANLLAAYGTHYVHSAQLGGLLRSITAIRLC
RAAMMGAGAQEVADCLGAEMTANVKSTTFSAMSSACRKDKSKNSAHSNFNQLFNERMVEV
EGGEQHGDLLYGTSQSYAEWLRSLQRLPGLVASNVRPLHTLLPRQDPRRGALKAAIGHYI
TWRALRANCSQQCAAHGMVGLCQCGCAANSVVSADCCSKHHGMAQVTVTVREGSGWHGDI
FTTTDAYVLLYFNGQRLRTATVWNNNRPKWGAQFDLGWVTLHPHQKMKLEVWDQDYGWND
HRLGVCEVPVQATGKQQRNVVCFPGGGDLRFSYSATCGPSLGGSQCSEYIPQPPKAQGGL
YRLSQWPPKTGGGGPVAWPQHKEGEKEAVDEEEEEEVQEEEEEEEEEEEEEEEEEEEEEE
ENFWEVPGVSEDNEMMVENKDHQNPSPDLQNPSFNPQNLSVGLKKDPDPQIAFPRSGAAP
PIL
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccgctccccactgtcttgccttctcaatcctcctcctcttccatcatctcccc
accatttgcccccagtgccaccgtgccgttggtaaatcctgccatgtccctccggctcct
ggcaccaactttctgggttcaggtttggatgtcaccaccatgtccctcactgagggccaa
gtgttggccatcaccaaacccaccggcaggcactgtgtggtctgcgtggaccagctccac
aaaggacagtccctcctcctctacaatggcgtcagcaagtggcgagcagggagtaagtgc
cagcagaggtcctcactggccgctggcagccaatccatgaggatgctggtggcccagacg
gagaagagggcgcagaactggagagtggggctggaggcagccctcatcccggggaggggg
gtcaccctggccatggccgggtcccactcacgcgtggcagagttcgggatgcagaaggag
cgggaagaccgctactcattcgccagcaccgagctgcgctgcgtgcactactggatctca
gcttcacctaaacccagaccgtccccccacttcctccatgctgttcgatccctcccaccc
cacttcacccccgccaccgccccagattatgccaacctcttggccgcctatggcacccac
tacgtccactcggcccaactgggcggcctcctccgctccatcaccgccatccgcttgtgc
cgcgccgccatgatgggcgccggcgcccaagaagtggctgattgtttgggtgcagaaatg
acagccaacgtgaagtcaaccacgttcagcgccatgtccagtgcgtgccgcaaagacaaa
tcaaaaaacagcgcccacagcaacttcaatcaactctttaatgaacggatggtggaggtg
gaaggtggcgagcaacatggcgacctcctctacggcacatcacagagctatgccgagtgg
ttgagatccctgcaacgcctgcctgggttggttgcctctaacgtcaggcctctgcacacc
ttgctgccccgccaggacccacgccggggagcactgaaggcggccatcggtcactacatc
acatggagagcattgagggcgaactgcagccaacagtgcgccgctcacggcatggttggg
ttgtgtcagtgcgggtgtgcagccaacagcgtggtcagtgccgactgctgttccaaacac
cacgggatggcacaggtgacagtgacagtgcgggagggcagcgggtggcacggtgacatt
ttcaccacaaccgatgcgtatgtgctgctgtacttcaatggtcagcggctacggacagca
acggtgtggaacaacaatcggcccaagtggggtgcacagttcgatttggggtgggtgaca
ctgcacccgcatcaaaagatgaagctggaggtgtgggatcaggattatgggtggaatgac
caccgcttaggggtgtgcgaagtaccggtgcaggctacaggcaaacagcagcgcaacgtt
gtgtgtttcccaggaggcggtgacctgagattcagctacagtgccacgtgtgggccaagc
ctggggggttctcaatgttcagagtacattccacagccccccaaagcacaaggggggctc
tacaggttgtcacagtggccaccaaagactggaggtggtggccctgtggcatggccacag
cacaaggagggagaaaaggaggcggtggacgaggaggaggaggaggaagtgcaagaggaa
gaggaagaggaagaggaagaggaagaggaagaggaagaggaagaggaagaggaagaggaa
gagaatttttgggaggtaccaggggtttctgaggacaatgagatgatggttgagaacaag
gaccaccaaaatccatcaccagatctccaaaatccatcattcaaccctcaaaatctatca
gtgggtctcaagaaggatccagatccacagattgcatttccacgctctggggcagctcct
ccaatcctatga
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