Tympanuchus pallidicinctus (lesser prairie-chicken): 128079952
Help
Entry
128079952 CDS
T08967
Symbol
ZC3H12D
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128079952 (ZC3H12D)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
128079952 (ZC3H12D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_4
zf-CCCH_2
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
128079952
NCBI-ProteinID:
XP_052537641
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MPARMALTSSFSSKPVPPGSEGVSTGREVHQSKLDFFCKLGYGKQDICKVLESLGQEALE
DDVLKELIRMGRKPQALESQAQPPQLKLVARGSCSTSSVPKWLGEEEGDSSSHLRAIVID
GSNVAMSHGNKEVFSCWGIRLAVDWFRERGHTYIKVFVPLWRKEPPRQDSPIADQHILEE
LEKQSILVYTPSRKVKGKRVVCYDDRYIVKVAYEKDGVIVSNDHYRDLQNENPEWKWFIE
QRLLMYSFVSNRFMPPDDPLGRHGPTLNNFLSKKPALPESTWQPCPYGKKCTYGNKCKFY
HPERLHQAQLSVADELRARTKVPMSMGKEEEVCNCSPYWTGREPMTHNPVTEMPQGASRS
MRASCYAAWSPDRYQPADAWAISSNSGLELDGKPEALGAHPLVGDMAALFISDKVYSGPA
CTSKDKDVSDSPHSCCSLRHNPFLLHHHHHCLDCTCLPGSPFQHSVIPPAPGRHQEHCWP
QECWSDGSQSGPVLEAQQRQHLPPSSVMPLAEPLQVYRERPQCCFPSHPFLLDASSTPDF
FQKASAQPSAAYCGYWPPHAARPPAQQTSVHRELCTIFPCAEVNRVMALYPEIKDIASLT
LLIQRHRNL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctaggatggccctgaccagttcattttccagcaagccagtaccaccaggctcc
gaaggagtttcaacagggagagaagttcaccagagcaagctggactttttctgtaagcta
ggctatggtaaacaggacatctgcaaagtgctggagagcctgggccaagaggccctggag
gatgatgtgctcaaagagctgattcggatggggagaaaacctcaagctctggagagccag
gctcagcctccccaactaaaacttgtagcccgtgggtcgtgcagcacctcatcagtgcca
aagtggctcggagaagaggaaggtgattcctccagtcacttgagagccattgtgattgac
ggcagcaatgtagcaatgagccatggaaacaaagaggtcttctcctgctgggggatccgc
ctggctgtggactggttccgagaaaggggacacacctacatcaaggtttttgtccccctc
tggaggaaggagccccctcgacaagacagtcccattgcagatcagcacattcttgaagag
cttgagaagcaatcaatccttgtgtataccccatctcggaaggtgaaaggcaagagggta
gtttgctacgatgatcgctatattgtgaaggttgcttacgaaaaagatggggtcattgtt
tccaatgaccattaccgggatctccagaatgaaaatcctgagtggaaatggttcatagag
cagcgactactcatgtactcttttgtcagtaataggtttatgcctcctgatgatccacta
ggccggcacggacccactcttaataatttcctcagcaaaaagccagcacttcctgaatca
acatggcagccttgcccctatggtaaaaaatgcacttacggtaacaaatgcaagttttac
catcccgagaggctgcatcaagctcagctgtcagttgctgatgagctcagagccagaaca
aaagtgcccatgagcatggggaaggaggaggaggtgtgcaactgctctccatattggact
ggcagagagcctatgactcacaaccctgtcacagaaatgccacagggagccagcaggagc
atgagggcttcttgctatgcagcatggtccccagacagataccagccagctgatgcttgg
gccatcagttccaactctggcctggagctggacgggaaaccagaagccctcggagcccat
cccctcgtgggagacatggcagcactcttcatcagtgacaaggtgtactctggaccagcg
tgcacctcaaaggacaaagatgtgtctgacagccctcatagctgctgtagcctgaggcac
aacccctttctgctgcaccaccaccaccactgcttggattgcacctgcttaccagggagc
cccttccagcactcagtgatcccacctgctccaggcaggcaccaggagcactgctggccc
caggagtgctggtctgatgggtcccagtctgggccagtcctggaggcacagcagcggcag
caccttcctccatcctctgtgatgcctctagctgagccactgcaagtttacagagagagg
ccccagtgctgtttccccagccacccctttctgctggatgccagcagcacgcctgacttc
ttccagaaagcctctgctcagcccagtgctgcttactgtggttactggccaccccatgct
gcaagacctcctgcccagcaaacaagtgtccacagggagctgtgcactattttcccctgt
gccgaagtgaatcgagtcatggcactgtaccctgagatcaaggatatcgctagcttgaca
ttactgattcaaagacacagaaacttgtga
DBGET
integrated database retrieval system
