Tympanuchus pallidicinctus (lesser prairie-chicken): 128080035
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Entry
128080035 CDS
T08967
Symbol
RAB11FIP5
Name
(RefSeq) rab11 family-interacting protein 5 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128080035 (RAB11FIP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128080035 (RAB11FIP5)
Membrane trafficking [BR:
tpai04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
128080035 (RAB11FIP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
128080035
NCBI-ProteinID:
XP_052537786
LinkDB
All DBs
Position
Unknown
AA seq
1473 aa
AA seq
DB search
MALLRAAALPADGPPAWLPTHVQVTVVRARGLRCKGGGGGGKAGSSDAYTIIQLGREKYC
TSVAEKSGGCPEWKEECAFELPPTEPGAEAALLLTVMHRALVGMDRFLGMARVPLRAAGL
QGRAAEERWHKLHSKPGKKEKERGEIQVSIQFTRNNLTASMFDLSMKDKPRSPFGKLKDK
MKGKKKYDLESASAIIPSSVGALDMEDDYDVGGKKSKVKGFFLKNKLRKSSLTQSNTSLG
SDSTVSSASLGMATSGPEVTRSPSRHSSLSTERSVKDFLPSPKLTHKRAFSDDVSQVSPV
LEPKAIHSLKPKTDPVSRSSLCINGSHVYSDEPTLRSPVPTLQGSTPLPVPKRPEEGFGF
IPIHADPHEVPWGAGSLERTQQRDEMRFIPSPPSLVLQEELKVSTKAVTLSNHLGRARME
ENSRLENKPTQVATPMVFSAEVTKEKQPEEIRKEEKKTKGGLFHKSDAGSRGQGEKTGAS
HGPAAVGDDRSKAGGWFGSKEPKDSPQKPSLEVSPQVETSSDAPSHFPSRSPARFPAAAV
AHLARMLSPNLPPATGDSQPGCLSPTNPFLNSLQSNPFFEDLLADQVLNSPSPTHFFSSF
PSEPHASTEVAGSLCSSEDCSPSASLRLKDPEGESPAKSVGVPVPETTPPSHADPPPPPD
EEPTASPPPLSEWDETFDAFATSRLRPEPKKEDFFASVAAEGMAFIDDPDAASPTERSAE
PDPEEGTKGFEKAEQQISSEMPPALRSWTNFSGLDVGANLVSTTQEATVIEDVLSPVSAG
SAARRRKSSTPMVWAASLSSGNPGEKEASTLLGADNCAGEERDSNEEETSSVGENGWMTI
ATETAPDPSESTQSIGQGSVFGQRPFHGEGTFETKSTPHVLPRSTFSSENTAETIPGSNV
AAVPPRVLQDMAAGCFPVAPGVGKELQDDGGEMFDIRSSVYRLQASMRLEAGEGHVKMGS
DAVLTMWTGVRGKEEVMPPPKPPRWFAAMCGRGEDENNASDTTARQRGGEEQQEGEEGLE
QPRSHPSGDTAVPAPHTAVREDAADVEAGGDASLGEEPPEMNGTDAAEHFETCPSRFSVD
ELTPSGAAGSWSQPALSPVSQLSLSAEPSIAPEQEECPEELGVSPRPDSGQPETFWTALE
EQEALGRPHRLAPEQDQGEGPAVGCPHRAEQGWPPAGIDFKKAEFWKPDRTEERSEQDAA
SPGNPFALAVSPIAPANPFVEKPASTLPVQAVLPERFAQGFSSPQLHGEALQQGFQPTNP
PGDPLGNPSLHDSQPLAFSTPFPVAVTNPEQFDFPSPAVTSHAAAQPCPLPQSGDTQASA
LVVLPRETQPAEKPFFQQTTSPHPVKPISAAVQEVSSEKKQQNKSSLTTALSNGLEKLKT
VTTGSVQPVAPSSHLEKTDPKKVKDPNVLDQSAKYYHLTHDELIQLLLQREKELSKKEEH
IQELENYIDQLLVRIMEQSPTLLQIPLGEAKTK
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctccgcgccgccgcgctgcccgccgacggccccccggcttggctgcccacc
cacgtgcaggtgacggtggtccgggcccgggggctgcgctgtaagggcggcggcggtggg
ggcaaagcgggcagcagcgacgcgtataccatcatccagctgggccgagagaagtactgc
acttcggtggccgagaaaagcggcggctgccccgaatggaaggaggaatgcgccttcgag
ctgccgcccaccgagcccggggctgaggccgcgttgctgctcaccgttatgcaccgcgcc
ctggtgggcatggaccgctttctgggcatggctcgggtaccgctgcgggctgcggggctg
cagggcagggcggccgaggagaggtggcacaagctgcactccaagcccggcaagaaggag
aaggaacgtggtgagatccaggtgagcatccagttcacacgcaacaacctcacggccagc
atgttcgacctgtccatgaaggacaaaccgcggtcacctttcggcaagctgaaggacaag
atgaagggcaagaagaagtacgacctggagtcggcctctgccatcatccccagcagcgtg
ggcgcgctcgacatggaggacgattacgacgtcggcggcaagaagtccaaagtgaagggc
ttcttcctgaagaacaagctgcgcaagtcgtccctaacgcagtccaacacctcgctggga
tccgacagcaccgtctcatcagccagcctgggcatggccaccagcggccccgaggtaacc
aggtcccccagcagacacagcagtctgtccacggagcgctccgtgaaggactttttacct
tctccaaagctgacccacaagagagcgttcagtgacgacgtctcccaggtcagccctgtc
ctggagccaaaagcaatccacagcctgaagccaaagacagatcccgtgtcccgctcctcc
ctctgcatcaatgggagccacgtgtacagtgatgagcccaccctgaggagccccgtgccc
accctgcagggctccactccgctgcctgtccccaaaaggccagaggagggttttggcttc
atcccgatccacgccgacccccacgaggtgccctggggtgccggcagcttggagaggacg
cagcaaagggacgagatgagattcatcccctctcctcccagcttggttttgcaggaagag
ctcaaggtgtccaccaaagccgtgaccctcagcaaccacctgggcagagccaggatggaa
gaaaacagccgcctagagaacaagccgacccaggtggcaacacccatggtcttctctgca
gaggtgacgaaggagaagcaacccgaggaaataaggaaagaagagaagaaaacaaagggc
gggctgttccacaagagtgatgcggggagcaggggccagggggagaaaaccggagcctcg
cacggccctgcagcagtgggagatgacaggagcaaggctggaggctggtttggttccaag
gagcccaaagactccccccagaaacccagcctggaagtgtctcctcaggtagaaaccagc
tcagatgctccttctcattttccttcccgctcccctgcccggttccctgctgctgctgta
gcccatcttgctcgcatgctgagccctaacctccctcctgctaccggagacagtcagccc
ggatgcttgtcccctaccaacccattcctcaactccctgcagagcaatcccttctttgag
gacctcctcgctgaccaggtactaaattctccttcacctactcactttttctctagtttc
ccgtctgagccgcatgcttcaacagaggtcgctgggagcttgtgttcctctgaggattgc
agtccctctgcctccctaagacttaaagatccggagggagaatctccagccaaaagcgtt
ggtgtccctgtgcctgaaaccactcctccgtcccatgcagaccctcctcctcctccagat
gaggaacccaccgcctctcctcctcccctctcagagtgggatgagaccttcgatgccttt
gccaccagcaggctcagaccagaaccgaagaaggaggacttctttgcttcggtggcggcg
gagggcatggctttcatcgacgatcccgatgccgccagccccacggaacggtcagctgaa
ccagatcccgaggaggggacaaagggctttgaaaaggccgagcagcaaatcagcagcgaa
atgcccccagcgctgcgatcttggacgaatttctctggtttggatgttggggcaaacctg
gtgagcacaacccaggaagcgactgtgatagaggatgtgctgagccccgtgtccgcaggg
tcggcggcgaggaggaggaagagcagcacgccgatggtttgggccgcctcgctgtcatcc
ggaaatccaggggaaaaggaggcttccaccctgctgggtgctgataattgtgctggggag
gagcgggacagtaatgaggaggaaacctcgagtgtaggggagaatggctggatgaccatt
gccaccgaaactgcgccagatccttctgagagcacccagagcattggccagggcagcgtg
tttgggcagcggcccttccacggcgagggcacctttgaaacaaaaagtactcctcatgtc
cttccccgaagcaccttcagctctgaaaacacagcagaaacaataccgggcagcaatgtg
gctgctgtacccccacgggtactgcaggacatggcagcagggtgcttccccgtggctccg
ggcgtggggaaggagctgcaggatgatggcggggagatgtttgacatcaggagctcggtg
taccggctgcaggccagcatgcggctggaagctggcgagggccatgtgaagatgggctct
gatgctgtcctcacaatgtggacgggtgtgcgagggaaggaggaggtcatgccacctccc
aaacctccgcggtggtttgcggccatgtgtggcagaggggaggatgagaacaatgctagt
gacacaacggcaaggcagcgaggtggggaggagcagcaggaaggtgaggagggcctggag
caaccacggagccatccgagcggtgacacggctgtcccagcacctcacacggctgtgcgt
gaggatgctgctgacgtggaggccggaggggacgcttctttgggagaagagccaccggag
atgaatgggacagatgcggccgaacactttgagacctgcccctccaggttctccgtggac
gagctcaccccatcgggtgctgcagggagctggagtcagccggctttgtctcctgtgtca
cagctcagcctcagcgcagagccatccatagccccagagcaggaggaatgccctgaggag
cttggtgtgtcgcccaggccggactcaggccaacccgagaccttctggacggcactggag
gagcaggaggcattgggccgcccgcacaggttagcgccggagcaggaccagggtgagggg
ccggcggtgggctgtccccatcgggcagagcagggctggccgcctgcagggatagacttc
aagaaggcggagttctggaagccagatagaacggaggagaggagcgagcaggatgctgca
agcccaggcaatccctttgctctggcagtcagccctattgcccctgcaaatccctttgtg
gaaaagccagcaagcacccttcccgtccaggctgtgctgcctgaaaggttcgctcagggc
ttcagctccccccagctccatggggaagcccttcaacaaggcttccagcccactaacccc
ccaggggacccgctaggcaatccttccctgcatgacagccagcccttggccttctccacc
cctttccccgtggctgtgactaaccccgagcagtttgatttcccctcccctgccgtgacc
agccatgccgcagcccagccctgccctttgccgcagtccggtgacacacaagcttcagca
ctcgtggttttgcccagggagacacagccagctgagaagccctttttccagcagacgacc
agtcctcacccggtgaagcccatcagtgctgcagtgcaggaggtctccagtgagaagaag
cagcagaacaaatccagcctgaccacagcgctgagcaatggcctggagaagctgaaaaca
gtcaccacaggcagcgttcagcctgtggccccctcgtcacacctggagaaaacagaccca
aagaaggtaaaggatcccaacgtgttggaccaatcagccaagtattatcatttgacccac
gatgaactcatccagctcctactgcagagagagaaggagctgagtaagaaggaggagcac
atccaggaactggagaactacattgaccagctgctggtgcgcatcatggagcagtctccc
acgctcctccagatcccgctgggggaagccaagaccaagtaa
DBGET
integrated database retrieval system
