Tympanuchus pallidicinctus (lesser prairie-chicken): 128080180
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Entry
128080180 CDS
T08967
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128080180 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
128080180 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
128080180 (PDLIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
Motif
Other DBs
NCBI-GeneID:
128080180
NCBI-ProteinID:
XP_052538070
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MSNYSVSLVGPAPWGFRLQGGKDFNMPLSISRLNDGGKAARAHVGIGDVVLTIDGISTDG
MTHLEAQNKIKACTGNLNMTLQRVASATKPDLIHVPKGEPKEVVKPVPVASAAASKVTAM
ASVAYNKTPRPFGAVASSKVTSIPSPSSAFTPAQAAPMLPTPAPFAAPGLHVNAKPNADG
RPPTPSTAKPAVNVPRQPATHNAAPGGHVGDNTQELAEGLRRGFRENQGDNKQQNGPPRK
HIVDTYTEFYHTPTHSDASKKRLIEDTEDWHPRTGTTQSRSFRILAQITGTDHMKEPEHE
GSKKSKEKKTENGELSENDARPESAATFLPIAESSPGSVPSFRLSEHIDATAPGREITVE
LPSPDASVLLPRTSGTEPPLPAKCSVATQTPEPPLPTPTAMQPPFAAPSVEATPVVPPRP
ARHDASVPTSETNAFGNISSCQSKSSISHTSLCARTEFLGSPSGSLAKLGPAPVPVFSPF
KQRSKIKRMAAAAVSAAIAVHARLSEPSAYRLLLDALLITPVTKPPLQASRPSRKSTSAL
ELPNSKSDSVEPTPPATSVRNVSASHESPDAKPTPTNNATSPSAPKPTGPPSSAKYSGWQ
PPSQAAPASGWTSNSIKTFGTTAPSQKFETASQLTEQDTLVQRAEHIPAGKRTPMCAQCN
QVIRGPFLVALGKSWHPEEFNCAHCKTSMAYIGFVEEKGALYCEVCYEKFFAPECSKCQR
KILGEVINALKQTWHVSCFVCVACHNPIRNNVFHLEDGDPYCETDYYALFGTMCHGCEFP
IEAGDRFLEALGHTWHDTCFVCSVCNDSLEGQTFFSKKDKPLCKKHAHSINI
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagcgtgtctttggttggcccagctccttggggtttcaggcttcaaggt
ggcaaggatttcaacatgcccctgtccatctctcggcttaacgacggtggaaaagcagcc
cgagcacacgtggggatcggtgacgtggttctcaccattgatgggataagtacagacggg
atgactcatctagaagcacaaaacaagatcaaggcatgtacaggcaatctgaatatgact
ttgcaaagagtggcttctgcaacaaaacctgatcttattcatgtaccaaagggagaacct
aaagaagtagttaagcctgtgcctgttgcctctgctgctgcatccaaagtcactgccatg
gccagtgtggcttacaataagaccccgaggccattcggagctgtggcctcctcaaaagtc
acctccatcccgtcaccgtcctctgccttcaccccagcccaggcagcacccatgctcccc
accccggccccatttgctgcaccaggactgcatgttaacgccaagcctaatgctgatggg
cggccgcccacgccgagcactgctaaacctgccgttaatgtcccacggcagcctgccacg
cacaatgccgccccaggcggccatgtcggcgacaacacccaggagctagcggaggggctg
cgacgaggattcagagagaaccagggtgacaataaacagcaaaatggcccaccacggaag
cacattgtggatacctatacggagttctaccacacccctactcacagcgatgccagcaag
aagcggctgatcgaagacactgaagactggcatccccggacaggcactacccagtcacgc
tcttttcgcatccttgcccagatcaccggcactgatcatatgaaagaaccagaacatgaa
ggttcaaagaagtctaaggaaaaaaaaacagagaatggagagctcagtgaaaatgatgct
agaccagagtctgcagccacttttctgccgatagcagagtcctcccctggcagtgtcccg
tctttcagactcagtgaacacattgatgcaacagctcctgggagggaaataactgtggag
ttgccctctcctgatgcatcagtccttttgccaaggacctctggcacagagcctcctctc
cctgcaaagtgcagtgtggctacacagaccccagagccccctctgcccacccctacggcc
atgcagccaccttttgcagccccatctgtggaagcgactcctgttgtgcctcctcgtcct
gccaggcatgatgcatctgtgcctacttccgaaacaaatgcttttggtaatatctcaagc
tgtcagtctaaatcgtccataagtcacacaagtttgtgtgctagaacagaatttctggga
agtccttcaggaagtctggccaagcttggacctgctcctgttccagttttttctcctttc
aagcagagatcaaaaattaagcgtatggctgctgctgccgtgtctgctgccattgctgtt
catgccaggctctcagaacctagtgcttaccgcttgctcttggatgccctgctcatcacc
cctgtcactaaacctcctctacaagccagcaggccctccaggaagtcaacaagtgctctg
gagttgccaaacagcaagagtgattctgtggagcctaccccacctgccacttcagtgagg
aatgtgtctgccagccacgaaagcccagatgctaaacctacccccaccaacaatgccaca
tctccttcagcacccaagccaacaggacccccaagcagtgccaagtactcaggctggcag
cctccaagccaagcagctcctgccagtggatggacatcaaacagtattaaaacatttgga
acaactgctccaagtcagaagtttgaaacagcttctcagctaacagagcaggacacattg
gttcagagggcagagcatattcctgcaggaaagcgtactccaatgtgtgcacagtgcaat
caagtcattagaggacctttcttggtggccctggggaagtcatggcacccagaggaattt
aactgtgctcactgcaagacttccatggcttacattggatttgtggaagagaaaggggct
ctgtactgtgaggtctgctatgagaagttcttcgcacctgagtgttccaagtgccagagg
aagatccttggagaagtaataaatgctttgaaacaaacttggcatgtttcctgcttcgtg
tgtgtggcctgtcataaccctatccgcaataatgtcttccacttagaagatggtgatccc
tactgtgagacggattactatgccctcttcggtactatgtgccacggctgtgaattcccc
attgaagctggagacaggttccttgaagccctgggccacacttggcatgacacttgcttt
gtatgttcggtatgtaatgacagtttggagggtcagactttcttctcgaagaaggacaag
ccactttgcaagaaacatgctcactctatcaacatctga
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