KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128080308
Entry
128080308         CDS       T08967                                 
Symbol
NWD2
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2 isoform X1
  KO
K24734  NACHT domain- and WD repeat-containing protein
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:tpai04990]
    128080308 (NWD2)
Domain-containing proteins not elsewhere classified [BR:tpai04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   128080308 (NWD2)
SSDB
Motif
Pfam: WDR55 Beta-prop_NWD2_C WD40_Prp19 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 NPHP3_N Beta-prop_WDR90_POC16_2nd AAA_16 AAA_22 AAA_28 NACHT WD40_RFWD3 AAA DUF4062 PQQ_2 NPHP3 B-prop_COPA_B_2nd Bac_DnaA
Other DBs
NCBI-GeneID: 128080308
NCBI-ProteinID: XP_052538327
LinkDB
Position
Unknown
AA seq 1742 aa
MWAAGAGGRAACPRDAALRRAAFAGNLAALPAHLVPGGRSVRVFISANPEDTIAERSALR
EHVYPKLREFCRENYGLEFQVIDLYWGVEADEWDSPELQKTRMKLLEDCLKSSAGPCFVG
LLGEKYGNIRIPGEVESAEFEMILDAAVEAKLETRIIEEWYCRDENAVPPAYYLRPKSEM
LKSFQNTMEPSSNSMNENKWQDISEEIKKIFKTAVKLLYEKGKMKHSQAKRYLSSAIEDE
LDFALGKQTPAFLKKCVCYIRKIANIERFVKIPEMGKYMDVVHTAGKFLRDPEAHEKLIK
LRDEFIPTIVASSNLRVYTSVTHCDMKLGYSQEVENHYIEGLGKQFYEDMIDIIQATVQQ
NFDTETDLLYDEVLQHSSLCKTYSTFYEYRCEALNIVHKYVLPSKIGHINPLIIYGGPCT
GKTLLLAEVAKKAYSWLQEEMGPDSDPVVIIRFLGSTETSIDLKNILQSICEQLAVNYRC
LVQSYPKKIHDLRDLFINLLNESSFHRPLVIIFDALEQLTDSDDARKLWWLPIHLPRSVR
IILSTLPNKHGILQKLRCLIHEEDNYIELTARDRKMCSQVLKHQLLRVKRKVTSGQQIYV
NEAFSKCTLPMFVNLTFREVKNWRSHKDVDESSLCITVHESIEQLFWSLESKCGSRLLSR
ALGYITMSKSGLSEMELEDILALDNSVMYEVSESIRDGNPLRIPYVYIARLKEGLQGYLI
ERQVKNVTLLLWANRHLHLIAQKLYLNNEEDLQEMHTIMAEYFLGVWSGGRRKPFYSNDQ
YLNSCPDRDSRGLNEEEKHCMDQIAFDRQAPDQPWVFQCNPLEPDIFFINHRKMTELIHH
LTRCGRTDDLLYGVIMNFSWLYTMIRIGQFDKALSDIELAYTYSQEKELKFLASTLRSIK
FKVVKYPGSLSAELQQRLLPVVSSLPKLRHLLLECDKDGPKYCSIVPLHSSMDVTYSPER
LPLSSSCMHVTEILPTFNPSTIIAALENGSISTWDVETRQLLRQITTSPSVIIGMKLTSD
ERYLVVATTNNTLLIYDNINSCLLSEMEIKGSKHCGLGGGSSFINGFTLSVNHALAWLEA
SKDVTVIDLLYGWPLYHFHCWYEVTCVQCSPDGVYAFCGQYLNTTTIFHLGSGEKLATVT
SEFSGGFVKFLLILDKAQEMVMVDSEGSLSVWSTEEITNPQLTDDFDCRRDDSEVVSIEL
SEDQSAILICKALSIELLDTHVWKVAEKFRAKHNEHFISAVLSKNGNCIIASMENTSAIF
VWRRDTGQCMASLQEISGTIVRLIKSNHHNMLLSLSTSGVLSIWDIDIITAMSNIDKSGK
PIQRLVLPARGELIYTLDGSDSVHKWNFSTGYIEAIFKHEGTVENCVLTTSGEIMVTSDD
KCSQYVWHTVSGENIFRINGQKISELMITHNDQFVVSLCEQNASRVWRLATGHRVCNILV
ALQNAFITTANTFVVGMAKNKVLAVSLWTGSITKKFCCDDGASIVDVKLIPDCPDIIVFI
TSTETVNIWSLTEEVICRRVQLPTNFLKNLEDFEMSPNGKLGIITRGDENINVLDLHSGK
LRVVHAPGVIWRQRLSRDGRYLVYICFLNEDDDNGAISSLIVMRLADGKNIGACSLYKTP
TFLTLSQRHLNIIIGFDDGSIGTYTVVDRVDAALKIKIATSNSRQIFNNTTQVIRPKCHN
YSFKVTADCIWRESTEVFARDSPITVIEPEVSEATPTKKHNYCYEKVCSAIDCRGHSFAA
EN
NT seq 5229 nt   +upstreamnt  +downstreamnt
atgtgggcagccggggcgggcggcagggcggcgtgcccgcgggacgcggcgctgcgcagg
gcggccttcgccggcaacctggcggcactgcccgcccacctggtgcccggcggccggagc
gtccgcgtcttcatcagcgccaaccccgaagataccatagcagaaaggagcgctctaaga
gagcatgtgtatcctaagctgagagaattctgcagggaaaactatgggctggaatttcag
gtcatagatttatactggggagtcgaggcagatgaatgggacagtcctgagctgcagaag
actcgcatgaagctgttagaagattgcttgaaaagttctgcaggtccatgttttgttggc
ctactgggagagaagtatgggaacatccgcatcccaggggaagtggagtcagctgaattt
gaaatgatcctggatgctgctgtggaggccaagctagagaccagaattatagaagagtgg
tactgcagagatgagaacgcagtgccgccagcatattacctcaggccgaaatctgaaatg
ctgaagagcttccagaatacaatggaaccttcttcaaactctatgaatgagaacaaatgg
caagatatatcagaagaaataaagaagatttttaagactgctgtgaaattgctgtatgaa
aaaggaaaaatgaaacacagccaagcaaagagatatctttcctctgctattgaagatgaa
cttgactttgccttgggtaaacaaacaccagctttcctaaagaagtgtgtttgctacatt
cggaaaattgccaacattgagcgttttgttaaaattccagagatgggaaaatacatggat
gtggtacatacagctgggaagtttctacgagatcccgaagctcatgagaaactgatcaag
ctcagggatgaattcattcctaccatcgttgcatcctccaatctgagagtgtacacctct
gtcactcactgtgacatgaaactggggtactcccaagaagtggagaatcattacattgaa
ggacttggtaaacagttctatgaagacatgatcgatataatccaggcaacagtgcagcag
aattttgacaccgagacagacttgctgtatgatgaagttcttcaacattcatcactatgt
aaaacatactccactttttatgaatacagatgtgaggcattaaacatagttcacaagtat
gttctacctagcaaaataggacacattaaccctcttatcatatacggaggaccatgcaca
gggaaaactcttttattagccgaagtggcaaagaaggcctattcctggctgcaagaagaa
atgggacctgattctgaccctgtggtaattataagatttttgggatccactgaaacaagc
atagatctgaagaatatacttcaaagcatttgtgaacaattagcagtcaactatcgttgc
ctcgtgcaaagttaccctaaaaagattcatgacctccgggatttgttcataaatctcttg
aatgagtcctcattccacagaccattggtgataatatttgatgccctagaacagctaaca
gatagtgatgacgctaggaagctttggtggcttcccattcaccttccccgttcagtacgg
ataattttgtcaacactgccaaacaagcatgggatactgcaaaaactgaggtgccttatt
cacgaagaagacaactacattgaattgactgcaagggacagaaagatgtgtagccaagta
ctgaaacatcagctgctgcgagttaaaagaaaagtaacatcagggcaacaaatctatgtc
aatgaagcattctccaaatgtacactgcccatgtttgtgaacttaaccttcagagaggtc
aagaactggagatctcacaaagacgtggatgagtcctccctctgtatcactgtacatgaa
agcatagagcagctgttttggtcactggaaagtaaatgtggatcacgactactgtcaaga
gcacttggttacatcactatgtccaaatctggcctgagtgaaatggaactggaagatatc
ttggcccttgacaacagtgttatgtatgaagtaagtgagagcatccgagatggtaaccca
ctgagaattccttatgtatacattgcaagacttaaggagggtttgcagggatacttaata
gagcgacaagtaaaaaacgttacccttcttctttgggcaaatagacatttgcacctaatt
gcccagaaattgtatctgaacaatgaagaagatttgcaggaaatgcacacaatcatggca
gaatattttcttggtgtttggtcaggtggacgaagaaaacctttttacagcaatgaccaa
tatttgaacagttgccccgaccgtgatagcagaggcttgaatgaggaagaaaagcactgc
atggatcagattgcttttgacaggcaggcgcctgatcagccatgggtttttcagtgtaat
cctttagagcctgacatcttttttatcaatcatagaaaaatgacagagcttattcatcac
ttgacaagatgtggaagaacagatgatctgctgtatggagtcattatgaacttcagctgg
ctgtacaccatgattagaatagggcagtttgataaagcactttcagacatagaactggct
tacacctattcgcaggaaaaggaactgaaattcctggccagtactctccgcagtatcaag
ttcaaagtagtaaaatacccaggctcactctctgctgagttgcaacagaggcttctgcca
gtagtaagttcactgcctaaactcagacacctcctcttagaatgcgacaaggacgggccc
aagtactgctctatcgtccccttgcattcttccatggatgtgacttacagccccgagcgc
ctgccactgtcctccagctgcatgcatgtcactgaaattctgcctacttttaatcccagt
acaatcatcgctgctttggaaaatggttccatcagcacttgggatgtagagactcgccag
ctattgaggcagattacaacctctccatctgttatcatagggatgaaacttactagtgat
gaaaggtatcttgtagtagctacaacaaacaacactcttttgatatatgataacataaat
tcctgtcttttatctgaaatggaaattaaggggtcaaaacattgtggattaggggggggc
tccagttttataaatgggtttacattatcagtcaaccatgcactcgcgtggctggaagcc
agcaaagatgtcactgtaatagaccttctttatggctggcctctctatcatttccactgc
tggtatgaggtaacatgtgtgcagtgttctccggatggagtttatgccttctgtggacag
tatctgaacacaacaaccatttttcacttaggcagtggagaaaagctggccaccgtgacc
tctgaattttctggtggatttgtgaaattccttctcattctggacaaggcccaagaaatg
gtgatggtggacagtgaaggcagcctctctgtttggagtacagaggagatcacaaatccc
cagcttacagatgacttcgactgcaggagagatgacagtgaggttgtcagcatagagctt
tctgaagaccaaagtgcaattttaatttgtaaggctctcagcattgagctccttgacact
catgtgtggaaggtagctgaaaagtttagagctaaacacaatgagcactttatatctgct
gtgttgtccaaaaatggcaactgtataattgcttcaatggaaaatacctcagccattttc
gtgtggagaagagatacgggacagtgtatggcaagcttacaggaaatctcaggaactata
gtcaggctaattaaatcaaatcatcataacatgctgctatctttatccaccagtggtgtc
ctttctatttgggatatagatatcataactgctatgtccaatattgacaaatctggcaaa
cctatccaaagactggtgttgccagccagaggtgaattaatatacacattggatggatca
gattctgtccacaagtggaacttcagcactggatatattgaagctatattcaagcacgaa
ggtactgttgaaaactgtgtgctgaccacttctggagaaataatggttacatcagatgat
aaatgcagccagtatgtatggcacactgttagtggggaaaacatctttcgcattaatggg
caaaaaatctcagagctaatgataactcataatgatcagtttgtagtctccctctgtgag
caaaatgcatccagagtttggcgactggcaacaggacatagggtttgcaatattttagtt
gccttacagaatgcatttataacaactgcaaatacatttgtggttggaatggcaaagaat
aaagtgttggcagtgagtctctggacaggcagtataaccaagaagttttgctgtgatgat
ggtgcaagcattgtagatgtcaaactgataccagactgcccagatattatagtatttata
acatctactgaaactgtgaacatctggagcttaacagaggaagtcatttgcagacgtgta
caactgcctaccaatttcttgaaaaatttggaagactttgagatgtccccaaacggcaag
ctaggaattataacccgtggtgatgaaaacattaatgtgcttgatctacacagtggaaaa
cttcgtgtagttcacgctccaggtgttatctggaggcaaaggctgtctcgtgatggccgc
tatcttgtgtacatctgttttctcaatgaagatgatgacaatggtgcaatctctagttta
attgtaatgaggctagcggatggcaaaaacatcggtgcctgttctctttataagactccc
actttccttacactctcacagagacatttaaatattattattggatttgatgatggaagt
ataggcacttacactgtagtggatcgagtcgacgcagcactgaaaatcaaaattgctact
tcaaacagccgtcagattttcaacaacacgacacaagtgattagaccaaaatgtcacaat
tatagcttcaaagtgactgcagactgcatatggagggaatcaactgaagtgtttgccagg
gatagccccattacagttatagagcctgaggtgagtgaagcaacaccaaccaaaaaacac
aactattgctatgaaaaggtgtgctcagccatagactgcagaggacatagttttgctgct
gagaactga

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