Tympanuchus pallidicinctus (lesser prairie-chicken): 128080542
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Entry
128080542 CDS
T08967
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04010
MAPK signaling pathway
tpai04020
Calcium signaling pathway
tpai04144
Endocytosis
tpai04510
Focal adhesion
tpai04540
Gap junction
tpai04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128080542 (PDGFRA)
04020 Calcium signaling pathway
128080542 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128080542 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128080542 (PDGFRA)
04540 Gap junction
128080542 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128080542 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tpai01001
]
128080542 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tpai04090
]
128080542 (PDGFRA)
Enzymes [BR:
tpai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
128080542 (PDGFRA)
Protein kinases [BR:
tpai01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
128080542 (PDGFRA)
CD molecules [BR:
tpai04090
]
Proteins
128080542 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
ig
I-set
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Motif
Other DBs
NCBI-GeneID:
128080542
NCBI-ProteinID:
XP_052538856
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MGAPPRTFLILGCFLTGPFLTLCQLPLPTIVPNRNEMVVQLNSNFTLKCSGDSEVSWQYP
VTEGSHRIDIRHEENNSGLFVTVLEVGNASAAHTGMYVCYYNHTQVEDGEVEGKDIYIYV
PDPDMPFVPSLPEDQFILVEEGDPTVIPCRTSDPSAEVTLVNSLDKPVYAFYDSKQGFVG
NFLAGPYTCKTMVKGMEFKSDEFLIYILRATSQLPVEIEALKTVYKTGETIVVTCVVFDN
EVVNLQWNYPGKVKEKGLIKLDDIKVPSQKLVYTLTIPDASVKDTGDYECTARHATKEVK
ENKKVVITVHDKGFIHLEPQFSPLEAVNLHEVKNFVVDVQAYPAPKMYWLKDNVTLIENL
TEIVTSSNRVQETRFQSVLKLIRAKEEDSGYYTLVAENEDEIKRYTFSLLIQVPALILDL
MDDHQGSAGRQTVRCLAEGTPLPDVEWLVCKDIKKCSNDTSWTLLTNNISDIHMEAHLDE
KNMVESQVTFQKVEETLAVRCVARNDLGAVTRELKLVAPTLRSELTVAAAVLVLLVIVII
SLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGMNPADESTRSY
VILSFENTGEYMDMKQADTTQYVPMLERKEGSKYSDIQRSVYDRPASYKKKSLSDSEVKN
LLSDDSSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSTFYNKIKSGYRMAKPDHATNEVYEIMVKCWNSEPEKRPSFYHLSEIVESLLPGEYKK
SYEKIHLDFLKSDHPAVTRMRGDCDNAYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIP
LPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDSSD
LVEDSFL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctcccccaaggacgttcctgatcctgggatgttttctcacaggaccgttccta
acactttgccagcttcctctgccgacgattgttcccaacagaaatgagatggttgtacag
ctgaattccaatttcacactcaaatgctctggagacagtgaagtgagctggcagtacccg
gtgaccgagggaagccacaggatagacatcagacacgaggagaacaacagtggcctcttc
gtgacagtgctcgaagtcggaaatgcctcagccgctcacacgggcatgtatgtttgctat
tataaccacacgcaagtggaggatggggaagttgaggggaaggacatctacatctatgtg
cctgatccagacatgccttttgttccttccttaccagaagaccagttcatcctagtagaa
gaaggtgatcccaccgttatcccttgtcggacaagtgacccaagtgctgaagtgacctta
gttaacagtttagacaagcctgtctatgctttctatgacagcaaacaaggcttcgtaggg
aacttccttgcaggaccatatacatgcaaaacaatggttaaaggcatggagttcaagtcc
gatgagttcctcatctatattttaagagctacttcacagctgccggttgaaattgaagct
ctgaaaactgtctacaaaacaggcgagaccatcgtagtgacttgtgtggtctttgacaac
gaggtggttaatttacagtggaattatcccgggaaagtgaaagaaaaaggtctgataaaa
cttgatgatatcaaagtcccatcgcagaagttggtttacacgttgaccattcctgacgcc
tcagtgaaagacacaggggattatgaatgtactgctcgacatgcaaccaaggaggttaag
gaaaataagaaagtagtcattacagttcatgacaaagggttcattcatctagagcctcag
tttagccctttggaagctgtcaatctacatgaagtcaaaaattttgtcgtcgatgtgcag
gcgtaccccgctccaaaaatgtactggttgaaggataatgtgactctgattgaaaatctt
actgagattgttactagttcaaacagggtccaggaaacacggtttcaaagtgtactaaaa
ttgatccgggccaaggaagaagacagtgggtactatactttggttgctgaaaatgaagat
gagattaagagatacaccttctcgttactaatacaagttccagccttgatcttagacctc
atggacgaccaccaaggctctgctggcaggcagacagtgaggtgcttggctgaagggacc
ccacttcctgatgtggaatggctggtttgcaaggacattaaaaaatgcagcaatgacact
tcctggactcttctgactaacaatatctctgatatacacatggaagcccacctggatgag
aagaatatggtggaaagccaggtgaccttccagaaggtagaggaaaccctggctgtgaga
tgtgtagcaagaaacgaccttggtgctgttactcgggaactgaaacttgtggctcccacc
ttgcgatcagaactgacagtggctgctgccgtcttagtactgttggtgattgtgataatt
tcactgattgtcctggtcatcatctggaaacagaagccgaggtatgagataagatggaga
gtcattgagtctatcagccctgatgggcatgaatacatttatgtggacccaatgcagtta
ccttatgactccagatgggagtttcctcgagatgggttagtgcttggtcgaatccttggt
tctggtgcattcggaaaagtggtggaagggacagcatatggactgagtcgttctcaacca
gtgatgaaagtagctgtgaaaatgctgaaacctacggctagatccagtgaaaaacaggca
ctcatgtctgaactgaagataatgacacatcttgggccccacctgaatattgtgaacctg
cttggagcttgtacaaaatcaggtcctatttacataatcactgaatactgcttttatggt
gatttggtgaactatctgcacaagaacagggacaacttcctcagtcgacatccagagaaa
ccaaagaaagatctggatatctttgggatgaacccagctgatgaaagcacaagaagctat
gtgattttatcatttgaaaacactggagaatacatggacatgaagcaagctgatacaact
cagtatgtgccaatgctggaaaggaaagagggatctaaatactctgatattcagagatct
gtgtatgatcgacctgcttcatataagaagaaatctttgtcagattcagaagtaaaaaac
cttctttcagatgacagttcggagggtctgagcctactggatttgctaagcttcacctac
caggttgcacggggaatggaattcttggcttctaaaaattgcgtgcaccgtgacttggca
gctcgtaatgtccttctggctcaaggcaaaatcgtgaagatctgtgactttgggttggct
agagacatcatgcatgattccaactacgtctccaagggcagcaccttccttccagtaaaa
tggatggcacctgaaagcatttttgacaatctgtacacaacattaagtgatgtctggtct
tatggtattctgctgtgggaaatattttctcttggtggcacaccatatcctggcatgatg
gttgactccactttctacaataagataaagagtggctaccgaatggcaaaacctgatcat
gcaaccaatgaagtgtatgagatcatggtaaagtgctggaacagtgaaccagagaaaaga
ccttcattttaccatttgagtgaaatcgtggagagtttgttgcctggagagtacaaaaag
agctacgagaagattcacctggacttcctgaaaagcgaccacccagctgtcactcgaatg
agaggggactgtgacaatgcttacattggtgtcacctacaagaatgaagacaagttaaag
gatagagagagcggatttgatgagcagaggctgagcgctgacagtgggtacatcatcccc
ctgcctgacattgaccctgtttctgaagatgagcttggcaaaaggaacaggcacagttca
cagacgtctgaagaaagtgccattgaaactggttccagtagctctacttttatcaagaga
gaggacgagaccattgaggacattgacatgatggatgacatcgggattgactcctcggat
ctggtagaggacagcttcctgtaa
DBGET
integrated database retrieval system
