Tympanuchus pallidicinctus (lesser prairie-chicken): 128080546
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Entry
128080546 CDS
T08967
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128080546 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128080546 (FIP1L1)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128080546 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
128080546
NCBI-ProteinID:
XP_052538875
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MSTGEVERLSADLGGAAGDEEEEWLYGDENEAERPEEEKTSAPPPPGNEEEAAENGIVKT
KVTEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQFSYGAAPVNLNIKTGGRVYGSSAGVKV
KGVDLDAPGNINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIR
MGLEILPVTSATNKIMAEDNAMEVTSSAEILDGRYHLFKVQQGRTGNLEKELAVQSTKAD
FTSPPALFKSGIPTNRRLSGAIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVDNF
TKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSL
IPTIESGHSSGYDSRSVRAFSYGGVTFPHLAGSAPSWSSLMDSSKQWDYYARREKDRERD
RDRSRDRDRDRDRDRDRERTRDRERDRDHSPSSSAFNSDEERYRYRDYAERGYDRHRTSR
EKDDRHRERRHREKEDTRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASSEPA
PEQENTEAAPAE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggcgaggtggagcggctgtcggcggacctcggcggggccgccggcgacgag
gaggaggagtggctttacggcgatgaaaatgaagcggaaagaccagaagaagaaaaaact
agtgctccacccccacctggaaacgaagaggaggctgcagaaaatggcattgtgaaaacg
aaggttactgaggctgaggatgacagtgatagtgatagcgatgacgatgaagatgatgtt
caagtcaccataggagatattaaaacaggagctccacagtttagttatggagcagcacct
gtgaacctcaatattaagacaggaggacgtgtttatggatcttctgcaggtgtaaaagtt
aaaggggtggatttagatgcaccagggaatattaatggtgtaccacttctggaagtagat
ctagattcttttgaagataaaccttggagaaaaccaggggctgatctatctgattatttc
aactatgggttcaatgaagatacatggaaagcatactgtgaaaaacagaagaggatacga
atgggtcttgaaattttaccagttacctcagccactaataaaattatggctgaagacaat
gctatggaagtaacatcaagtgcagagattctcgatggcagataccatctttttaaggta
cagcagggcagaactggaaatctggagaaagagttggcagtgcagtcgaccaaagctgat
ttcacatctcctcctgccttattcaaatcaggaattcctacaaacaggcgattgtctggc
gcaatcgatgtgattggacagaccatcactatcagcagggtagaaggacgacgacgtgct
aatgaaaacagcaacatacaggttctttcagaacgatctaatcctgaagtagacaatttt
accaagccacctccatttttccctccaggagctccacctactcaccttccaccacctcct
ttcctcccaccccctccaactgttagtactgctccgcctctgattcctcctccaggtata
ccaataacagtaccaccaccaggctttccaccacctcctggcggtcctccaccttccctc
atacccactatagaaagtggacattcctctggctatgacagtcgttctgttcgtgcattt
tcatatggtggtgtcacctttccgcaccttgcaggttctgctccttcatggtctagtctt
atggacagcagcaaacagtgggattactatgcacggcgagagaaggacagggagcgggac
agagatcgatctcgggatcgagaccgggaccgggaccgagacagagatcgagaacgtacc
agagacagggaaagggaccgagatcacagcccatcctcaagcgcgttcaacagtgatgaa
gaacgatacagatacagagactatgcagaaagaggctacgaccgccataggacaagcaga
gagaaggatgaccgacacagagagaggagacacagagagaaagaagatacgaggcacaaa
tcatctcgaagtaacagcaggcgccgtcacgacagtgaagaaggggacagccacagaagg
cacaaacacaaaaaatccaaacgaagcaaagaaggaaaagaagccagcagtgaacctgct
cctgagcaggaaaacactgaagctgcccccgcggaatag
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