Tympanuchus pallidicinctus (lesser prairie-chicken): 128080574
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Entry
128080574 CDS
T08967
Symbol
NPNT
Name
(RefSeq) nephronectin isoform X1
KO
K06824
nephronectin
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04512
ECM-receptor interaction
tpai04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128080574 (NPNT)
04518 Integrin signaling
128080574 (NPNT)
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Motif
Pfam:
EGF_CA
MAM
cEGF
FXa_inhibition
EGF_3
EGF
EGF_PEAR1L
Plasmod_Pvs28
EGF_MSP1_1
JAG1-like_EGF2
EGF_2
EGF_DL_JAG
hEGF
Motif
Other DBs
NCBI-GeneID:
128080574
NCBI-ProteinID:
XP_052538906
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All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MELSVRLLLAACLSLGAAGEFDRRWPRQIVSSAGLCRFGSRIDCCWGWARLAWGQCQPFY
VLRQRIASLRCQPKAICQPGCKHGECIGPNKCKCHPGYTGKTCNQDEQLYSSPPGQNSEA
HLFRPLEHRSRNTPSRDLNECGLKPRPCKHRCMNTYGSYKCYCLNGYMLLPDGTCSSALS
CSMANCQYGCDVLKGEVRCRCPSPGLQLGPDGRTCIDIDECATGRVICPRFRHCVNTFGS
YMCRCHKGFDLMYIGGKYQCHDIDECSLGQHLCGSYSQCYNTPGSYKCKCKEGYRDNGTS
CIQRPVTRPTARPTPGPTTRTTSKPTTRPTPKLTTRYIPVTTRPVIKPVAKPAPPTPPLP
TTLRPTLPPQRTPLITTTHPLLVPVETTSSQGATDDNRIQIDPQKPRGDVFIPRQPGVSN
NLFEILEIERGITADEFEANDDPGTLVHSCNFDSGLCGWIKDKDDGLHWEPVRDASGGQY
LTISEPKGTEGKAAHLILPLGHMAQPGDLCLSFRHKVPGLHSGALQVFVRRSGAHGPAVW
GRNGGHGWRQTHITLRGLGIKSVIFKGEKGKGRTGDIGLDDVMLRRGHCSEEH
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggagctctccgtgcggctgctgctggccgcctgcctctccctgggggcggccggagag
tttgacagaaggtggcccagacaaatagtttcctctgcaggactgtgccggtttggaagc
agaattgactgctgctggggctgggcccgtttggcctggggacagtgccaacctttctac
gtcttaaggcagagaatagccagcctaaggtgccagcccaaagctatatgccaaccagga
tgcaaacacggagaatgcattgggccaaacaagtgcaagtgccatcccggatacactgga
aaaacgtgcaaccaagatgagcaactgtattcaagtccacctggtcagaacagtgaagca
catctattccgccccctggagcatcgttcaagaaatacaccttcaagggatctaaacgag
tgtggactgaagccccggccgtgcaaacaccggtgcatgaacacctacggcagctacaag
tgctactgtctgaacggctacatgcttctgccagatggaacctgctccagtgccctttcc
tgctcaatggcaaactgtcagtatggctgcgatgtgctcaaaggggaagtgcgctgccgc
tgtccttctccaggcctgcagctggggcctgatggtagaacctgcatagatattgatgaa
tgtgccactgggagagttatctgtccgcgatttaggcactgcgtcaatacttttggaagc
tacatgtgcaggtgtcataaaggctttgacttaatgtacattggaggcaaataccaatgc
catgatatagatgaatgttcccttggccagcacctttgtggtagttattcacaatgttac
aatacaccaggatcctacaaatgcaaatgtaaagaaggctacagagacaatggaacaagc
tgcatacaaaggccggtgaccagaccaacagctcgacccacacctgggccaacaactcga
accacatcaaagccaacaactcgacccacaccaaagctgaccactaggtacatacctgtg
acaacaaggccagtaataaaaccagtggcaaagcctgcacctccaacgccacctctacct
acaacgttaagacctacgctgccaccacaaagaactcctctgataaccaccacacatcct
ttgcttgttcctgttgaaactacatcttcccaaggagctacagatgataacaggatacag
atagatcctcagaagccccgaggggatgtgttcattccacgccagcccggagtgagcaat
aacctgtttgaaatacttgaaattgaaagagggattactgctgatgaattcgaagcaaat
gatgacccaggcacgctggtacacagctgtaattttgacagtggcctgtgtggatggatc
aaggacaaggatgatggtttacactgggagccagttagagacgcgtcagggggacaatat
cttaccatctctgaacccaaaggcacagagggaaaagcagcacatcttattctgccgctg
ggccacatggctcagcctggggacttgtgtctgtcattcagacacaaggtgcccgggctg
cattcgggtgccctgcaagtctttgtgaggagaagtggtgctcatggaccagctgtgtgg
ggaaggaacggcgggcatggctggaggcagacacacataactctgcgaggactgggcatc
aagagtgttattttcaaaggagagaaaggaaaaggaagaactggggacattggactggac
gatgtgatgttgagaagaggacactgctctgaagagcattag
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