Tympanuchus pallidicinctus (lesser prairie-chicken): 128080741
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Entry
128080741 CDS
T08967
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04010
MAPK signaling pathway
tpai04210
Apoptosis
tpai04218
Cellular senescence
tpai04620
Toll-like receptor signaling pathway
tpai04621
NOD-like receptor signaling pathway
tpai04622
RIG-I-like receptor signaling pathway
tpai04623
Cytosolic DNA-sensing pathway
tpai04625
C-type lectin receptor signaling pathway
tpai04920
Adipocytokine signaling pathway
tpai05132
Salmonella infection
tpai05164
Influenza A
tpai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128080741 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128080741 (NFKB1)
04218 Cellular senescence
128080741 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128080741 (NFKB1)
04621 NOD-like receptor signaling pathway
128080741 (NFKB1)
04622 RIG-I-like receptor signaling pathway
128080741 (NFKB1)
04623 Cytosolic DNA-sensing pathway
128080741 (NFKB1)
04625 C-type lectin receptor signaling pathway
128080741 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
128080741 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
128080741 (NFKB1)
05168 Herpes simplex virus 1 infection
128080741 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
128080741 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128080741 (NFKB1)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
128080741 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
128080741
NCBI-ProteinID:
XP_052539264
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MAGEDPYIMGVSDPQMFAMDQLMGMNTIFNNTGYITSDLPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPEL
SYLQAEGCGDRQLTEREREIIRQAAVQQTKEMDLSVVRLMFTAFLPDSNGGFTRRLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGGSGAGGSGMFGGGGGGAGSGFSYPSYGYSAFGGMHFHPG
TTKSNAGMKHELSNSTVEKDEESSDKQSGKWDTKHDVKVESVEKNECRTSGHNEEKEDAS
LCCKDEGNKAKCGCQDGLFLEKAMQLARRHCNALFDYAVTGDVRMLLAVQRHLTAVQDDN
GDNVLHLSIIHLHRELVKNLLQVMPDMNYSSIINMRNDLYQTPLHLAVITKQAEVVEDLL
KAGANVNLLDRHGNSVLHLAAAEGDDKILSLLLKHQKASSMIDLFNGEGLSAVHMVVMAN
SLSCLKLLIAAGVNVNAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTTP
LHIAAGRGFTKLAAVLKAAGADPHIENFEPLFDVEEDVKDDDDEGIVPGTTPLDMAANWE
VYDILNGKPYVAAAAVSEDLMTQGPLKELNESSKQQLYKLLETPDSSKNWSTLAEKLGLG
ILNNAFRLSPSPSKTLLDNYKISGGTVQELIAALRQMDHTEAIEVIEKALSSSQSQPHQE
DNTIEAFPISSPANFAKGETGELYNHKFQDTESTCDSGVETSFRKLSFTYSDSLNSKSSV
TLSKMTLGYSQESSEQSNYIPN
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaggatccatatattatgggagtgtcagatccccaaatgtttgcaatggac
cagctcatgggaatgaatacaatatttaataatacaggctacatcacttcagacttacca
ctacgaacagcagatggaccgtaccttcaaatcattgaacagccaaaacagaggggcttt
cgattccgatacgtatgcgaagggccttcacacggtggacttcctggtgcttccagtgaa
aagaacaaaaagtcatacccccaagtcaagatttgcaactatgttggacctgcaaaagta
attgtccagttagttactaatgggaaatacgtgcacttacacgctcacagcttggtgggt
aaattttgtgaagatggagtgtgcacagtcaatgcaggaccgaaagacatggttgttggg
tttgcaaaccttggaatacttcacgtcacgaagaagaaagtgtttgaaactctggaaacg
cgcatgatcgatgcttgcaaaaaaggatacaacccaggactcttggtgcatcctgaactt
agctatctgcaggcagaaggatgtggagacagacagctaactgaacgagaaagagaaatt
attcgccaggcagcagttcagcagacaaaagaaatggatctcagtgtggtgcgtcttatg
tttacagcctttcttcctgacagtaatggtggtttcacacggaggcttgatcctgttata
tcggatgcaatatatgacagcaaagcacccaatgcttccaacttaaaaattgtaagaatg
gacagaacagcagggtgtgtaacaggaggggaagagatttaccttctctgtgacaaggtt
cagaaagatgatattcaaatacgtttctatgaagaggatgagaatggtggtatgtgggag
ggctttggagacttttctcctacagatgtacatagacaatttgctattgtgttcaaaaca
cccaagtatcgagatgtcaatatcacaaagccagcatctgtatttgtacaactacgtcgg
aaatctgatctagaaacgagtgaaccaaagccttttctctactatccagaaatcaaagat
aaagaagaagtgcagaggaagcggcagaagctcatgccaaacttctccgatggctacggt
ggaggcagcggcgcaggaggcagtggcatgtttggaggaggaggcggcggtgctggctct
gggttcagttatccttcctacggttactctgcttttggaggaatgcatttccaccctggc
acaacaaagtccaatgctggaatgaaacacgaactgtcaaatagcacagttgaaaaagat
gaagagagctctgataaacaaagtggcaaatgggacacgaaacacgatgtgaaagtggaa
agtgtggagaagaatgaatgcagaacctctggtcataatgaggagaaagaggatgcttct
ttgtgctgtaaagatgaaggaaacaaagcaaagtgtggctgtcaggatggtctgttcctg
gagaaggctatgcagctcgccaggcgtcattgcaacgctctctttgattatgctgtaact
ggagatgtgaggatgctgctagctgttcagcgccacctcactgctgtccaggatgacaat
ggagacaatgtccttcatttgtcaattatccaccttcatagagaactggttaaaaacctg
ttgcaagtgatgccggacatgaattatagcagcattatcaacatgagaaatgacctttat
cagacccccttgcacctggcagtaatcacaaagcaggcagaggtggttgaagacttgctg
aaggctggagcaaatgtcaaccttctggatcgccacggtaattctgtcttacatttagct
gctgctgaaggagatgacaagattctgagtctgctcctcaagcatcagaaggcatcttca
atgattgaccttttcaatggcgaaggtctcagtgcagttcacatggtggtgatggccaat
agcttgtcctgtctgaaactactgattgctgctggagttaacgtcaatgctcaggaacaa
aaatctggacgaactgcattgcatttagctgttgaacaagagaacatccccttggcaggc
tgccttttgcttgagggtgatgcagatgtggacagcactacctacgatggcacaacacct
cttcacatagcagctggaaggggctttacaaaactggcagcagttctcaaagcagcaggt
gcagatcctcacattgagaactttgagccactctttgatgtagaagaagatgtgaaagat
gatgatgatgaaggaattgtacctggaacaacaccactggatatggcagccaactgggag
gtatatgacatattaaatggcaaaccctacgtggcagcagcagcagtttcagaggactta
atgacacaaggccctctgaaagagctgaatgaaagctccaagcagcagctttacaagcta
ttggaaacacctgattcaagcaagaactggtctactctagcagaaaagttgggtcttggc
attcttaataatgccttcaggttgagcccttcaccttcgaaaactctgctagataactat
aagatttctggaggtacagttcaagagctgattgctgctttgagacagatggatcacacg
gaagctattgaagtaattgagaaagcactatctagttcacaaagtcagcctcaccaggag
gacaacacaatagaagcttttcctatatcatcaccagccaattttgcaaagggagagaca
ggtgaactttataatcacaaatttcaagacactgaaagcacgtgtgacagcggggtagag
acctccttccgcaaactgagctttacttattcagactctctgaacagcaagtcatcggta
acacttagcaaaatgaccctgggctacagccaggaaagctcagagcaaagcaattatata
cctaactag
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