Tympanuchus pallidicinctus (lesser prairie-chicken): 128081004
Help
Entry
128081004 CDS
T08967
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128081004 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpai03021
]
128081004 (TAF4)
03036 Chromosome and associated proteins [BR:
tpai03036
]
128081004 (TAF4)
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128081004 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
128081004 (TAF4)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128081004 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
128081004
NCBI-ProteinID:
XP_052539853
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSGGSGSGSPSPSPGGVVVGGSANAQTESGGGGGKMGLSAPEITKAGAGGVQGGVINHNT
RSQTSALDGATTTSTSTTTAAAGGSEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTT
VQTLNGSNVVMNSHHTGSAAFSGTPVTANPASAPAVAPLVNNGPGSVGKGNTVNAVLPSA
SNTVIQTSFLNTAVSSASSSSPTVISSQPPPSVGSGGPTVTLVRPPIHTAGPTVAAAGAA
TQNGSNTVINSTISVGSFPAVATATVGSGVSLQTTLVNSQSGSSVPAAPTTQVIKSESPK
TIVQAVSQQQTLATAGQPSTTGGNMIIGQTMQAGLTNVAPNPGGIPPAAPGTPTGMAKGT
ANTVAQTLPRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQ
LLMIPQQALAQMQAQAHAQSQPQNTMTPRPATPTSAPPVQISTVQAPGTSIIARQVTPTT
IIKQVSQAQTTVQPTTALQRPPVVQPQIVLGGTAQTTTLGAATAVQTGTPQRTVQGTTAT
STAATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQNLLDGKIEAEDFTSRLY
RELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQPTTQPTTQATTALTAVMLSPS
VQRAAGKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQQPQKAGTLIRPPQVTLT
QTPMVALRQPHSRIMLTTPQQIQLNQLQTVPVVKPTVLPGNKAIATVSTQVAAAQKNKLK
EPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFSAPLQRR
ILEIGKKHGITEVHPDVVSYVSHATQQRLQNLVEKLSETAQQRNISYKDDERYEQASDVR
AQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQ
RDANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVGTTRQFTRQRITRVNLR
DLIFCLENERETSHSLLLYKAFLK
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctagagtcccagctggcggcctccggccaccaccac
cagcaccacaaggcgcaggagcccctgcgggccgctggggggctgctggggaaccatgtt
gtgagcggcggcagcggcagcggcagccctagccccagccctggaggagttgtagtagga
ggcagcgcgaatgcccaaacggagagcggcggcggcggcggcaagatgggactgagcgcc
ccggagatcacaaaagcaggagcaggaggagtgcaaggaggtgttattaatcataacacc
aggtcccagacttcagctctggatggagccaccacgacgagcaccagcaccaccactgca
gcggcaggaggatccgaggtcactgctgctccagggaccctcagtcagggcaaatcggtg
gttatcagcaccatggcgactgccttgtccaccaggaatggcaagattgggaccacaaca
gtgcaaactttgaatggtagtaacgtggtgatgaactctcaccacacaggaagtgctgct
ttctctgggactccagtgaccgccaaccccgcttctgcacctgctgttgcccctcttgtt
aacaatggacctggatctgtgggaaaaggaaatactgttaacgccgttttgccgtcagct
tccaacactgtcatccagacttctttccttaatactgctgtgtcctctgcatcttcctcc
tcgcccacagttatctcttcacagccgccaccgagcgttggaagcgggggccctacggtc
acactcgtgaggcccccgattcacacggcaggacccacggtagccgcagctggcgcggcc
actcagaatgggagcaatactgtgatcaattcaaccatcagtgtggggagttttcctgct
gttgctacggccactgtgggatctggagtttccctccaaacaacgcttgtgaatagccag
tctggttccagcgtgccggcggctcctaccacacaggtcatcaaatctgagtctcctaaa
actatagtgcaggcagtatcccaacagcagacgctggctactgctggccagcccagtact
acagggggtaacatgattattgggcaaactatgcaagctgggctcaccaatgttgccccc
aatcctggtgggatacctcctgcagcacctggcacccctacgggaatggctaaaggcact
gccaacacggtggcacaaactctaccgaggactccaacagcaactacgagtggaatcaga
gcaactttgactcctacagttttagcacctcgtttgcctcagccacctcagaatcccact
aacattcagaattttcagttaccaccaggcatggtcctcgtgcgtagtgagaatgggcag
ttgctgatgatccctcaacaagccttggcgcagatgcaagcacaggcgcatgcccagtct
cagcctcagaatactatgactcctcgacctgctacacctaccagtgctcctccagtgcag
atatcaacagtgcaggcaccaggaacatctattattgcacgacaggtgacaccaactact
atcatcaagcaagtgtctcaggctcaaacgacagtgcagcccacaacagcgttacagcgt
ccgcctgttgtgcagcctcagattgttctgggtggtactgcacaaacaactacgttgggg
gcagcaacagctgtacaaactggaactcctcagagaacagtgcaaggaacaacagcaacc
tccactgctgccacagaaacaatggaaaatgtgaagaaatgtaaaaactttctatccaca
ttaataaaactggcatcatctggaaaacagtcttcagagaccgcagctaatgtgaaagaa
ttggtacagaacctactggatggaaaaattgaagcagaagatttcaccagtaggctctac
agagaacttaattcttcacctcaaccttaccttgtgccttttctgaagaggagtttacct
gccttgagacagttaacaccagactctgcagctttcattcagcaaagtcaacagcagcca
acaacgcagccaacaacgcaagcaacaactgcacttacagcagtgatgctcagcccttca
gttcagcgcgcagcagggaaggcaactgcaactgtaacaagtactctacagcaaccagta
atcagcctaactcagcctacacaagttggtgttagtaaacaaggacagtcgacaccactg
gttattcagcagcctcagaaagcagggacgttgataaggcccccacaggtaacgttgaca
cagacaccgatggtagcactgcggcaaccacacagtcgtattatgctcactactcctcag
caaattcagctgaatcaacttcagacagtacctgtggtaaaaccaacagtattacctgga
aacaaagctatagccactgtttcaacacaagtagctgctgctcagaagaataaactgaaa
gaacctgggggaggttcttttagggatgacgatgacattaatgacgttgcatcaatggct
ggagtcaacctgtcagaggaaagtgctcggatattggcaacaaactcggagctggtgggc
acgttaacaaggtcttgtaaagatgaaaccttcctcttctcggcacctttacaaagaagg
atattagaaataggtaaaaaacatggaataacagaagtccatcctgacgtagttagctat
gtatcacatgctacacaacaaagactacaaaacctcgtggaaaaactatcagagactgct
cagcaaaggaatatttcttataaggatgatgaaagatacgaacaagcaagtgacgttcgg
gcacagctcaagttctttgaacaacttgatcaaatagagaagcagcgtaaagatgaacaa
gaaagggaaattttaatgcgtgcagcaaagtctcgatccaggcaagaagatccagaacag
cttaggctgaagcagaaggccaaggagatgcagcaacaagagctagcacagatgagacag
agggatgccaacttgactgcattagctgcaattggtccaaggaagaaaaggaaagtggat
tcaccgggatctggatcagggacagagggatctggttcgagtgcagcagtcccaggcagc
tctggagttggaacaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagg
gacctcatattttgtttagaaaatgagcgagagacaagccattcactattgctatacaaa
gcattccttaagtaa
DBGET
integrated database retrieval system
