Tympanuchus pallidicinctus (lesser prairie-chicken): 128081016
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Entry
128081016 CDS
T08967
Symbol
CDH4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128081016 (CDH4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128081016 (CDH4)
Cell adhesion molecules [BR:
tpai04515
]
Cadherins
Major cadherins
128081016 (CDH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_4
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
128081016
NCBI-ProteinID:
XP_052539869
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MRTGLRLLLLVLLVWGSAAALNGDLTVRPTCKPGFSEEDYTAFVSQNIVEGQKLLKVKFN
NCAGNKGVRYETNSLDFKVRADGTMYAVHEVQMASKQLILMVTAWDPQTLGRWEAIVRFL
VGEKLQHNGHKPKGRKSAPMDLAQQQSDTLLPWRQHQSVKGLRRQKRDWVIPPINVPENS
RGPFPQQLVRIRSDKDKEIHIRYSITGVGADQPPMEVFSIDPVSGRMYVTRPMDREERAS
YHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPEFINQVYNGSVDEGSKPGTYVMTVTAN
DADDSTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYIVIVQAT
DMEGNLNYGLSNTATAIITVTDVNDNPPEFTTSTYSGEVPENRVEVVVANLTVMDRDQPH
SPNWNAIYRIISGDPSGHFTIRTDPVTNEGMVTVVKAVDYEMNRAFMLTVMVSNQAPLAS
GIQMSFQSTAGVTISVTDVNEAPYFPTNHKLIRLEEGVPTGTVLTTFSAVDPDRFMQQAV
RYSKLSDPANWLNINATNGQITTAAVLDRESDYIKNNVYEATFLAADNGIPPASGTGTLQ
IYLIDINDNAPELLPKEAQICEKPNLNVINITAADADIDPNVGPFVFELPSVPSAVRKNW
TITRLNGDYAQLSLRIMYLEAGVYDVPIIVTDSGNPPLYNTSIIKVKVCPCDENGDCTTI
GAVAAAGLGTGAIIAILICIIILLTMVLLFVVWMKRREKERHTKQLLIDPEDDVRDNILK
YDEEGGGEEDQDYDLSQLQQPETMDHVLNKAPGVRRVDERPIGAEPQYPIRPVIPHPGDI
GDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYLNDWGPR
FKKLADMYGGGEED
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccggcttgcggctgctgctgctggtgctgctcgtctggggctcggcggcggca
ctcaatggggatcttacagttagacccacatgcaagcctggcttttcagaagaagactac
acagcgttcgtttcccagaatattgtggaaggccagaagctactcaaagtaaaatttaat
aactgtgccggtaataagggagttcggtatgaaaccaacagcctggacttcaaagtgaga
gcagatgggaccatgtatgctgtccacgaggtgcaaatggcctcaaagcagttgatcctg
atggtgaccgcctgggatccgcagacccttggcaggtgggaggccatcgtcaggtttctg
gtgggagagaagctgcagcacaatggacacaagccaaagggaaggaagagtgcacccatg
gacctggcacagcagcaaagtgacaccctgctcccctggcgccaacaccagagcgtgaaa
ggcctccggagacagaagcgagactgggtcatcccccccatcaacgtgccagaaaattca
aggggcccttttcctcagcaactggtccggattcgttccgataaggacaaagagatccat
atcaggtacagcatcaccggagtgggagccgaccagccgccaatggaagtcttcagcatt
gaccctgtgtctgggaggatgtatgtgacccgcccgatggacagagaggaaagagcctcc
taccatctccgggctcatgcagtggatatgaatggaaacaaggtggagaatcctattgac
ctttacatctatgtgattgatatgaatgacaacagaccggagtttataaaccaagtctat
aatggatctgttgatgaaggctctaaaccaggtacctacgtgatgacagtgactgcgaat
gacgctgatgacagcaccacggcgaacgggatggtgagataccgaatcgtgactcagacc
ccccagagcccatcgcagaacatgttcaccattaacagtgagacaggagatatcgtcacc
gtggctgctggcctcgacagggagaaagttcagcagtacatagtcatcgttcaagccaca
gatatggaaggaaatcttaactacggtctctcaaacacagcaactgcaatcatcacagtg
acagatgtgaatgacaacccccctgaattcacgaccagcacttattcgggggaagttcct
gagaacagagtggaggttgtggttgcaaatttgacagtgatggacagggaccagcctcac
tctcccaactggaatgccatctaccgcatcatcagcggggacccctctggccacttcacc
atccggacagaccctgtcaccaatgagggcatggtaactgtggtcaaggcagtcgactat
gagatgaacagagcattcatgctgacagtgatggtatccaaccaagcacccctggccagc
ggaatccagatgtccttccagtcgacagcaggagtcaccatttcagttacggatgtcaac
gaagcgccgtacttcccaacgaaccacaagctgatcaggctggaggaaggagtgcccaca
gggactgtcctcacgaccttttcagctgtagatcctgatcgcttcatgcagcaggcagta
agatactctaagctgtcagatcctgcaaactggctgaacattaatgccacaaatggtcag
atcactactgctgctgtccttgatcgagagtcagactacattaagaataatgtctacgag
gccacattcttggcggctgacaatggtatacccccggccagcggcactggcacgctgcag
atctacctaatcgacatcaacgataatgctcctgagctcctgccaaaggaagcacagatc
tgtgaaaagccaaacctgaatgtcatcaatatcacagccgcagatgctgacatcgatcca
aacgttgggccctttgtcttcgagctgccaagtgtgccatctgcggtgaggaagaactgg
accataacacgactgaatggtgattacgcccagcttagtttacggatcatgtacctggaa
gctggtgtgtacgatgtgccaatcatcgtgacggactcaggaaacccccccctgtacaac
acatccatcatcaaagtgaaggtgtgcccgtgtgacgagaatggtgactgcaccaccatc
ggggcggtggctgctgcaggactgggcacgggagccatcatcgccatcctgatctgcatc
attatcttactaaccatggtgctgctgtttgtggtgtggatgaagcgccgggagaaggag
cggcacaccaagcagctcctcattgaccccgaggatgacgtgagggacaacatcctgaag
tacgatgaggagggcggtggagaagaagatcaggattacgacttaagccagctccagcag
ccagagaccatggatcacgtgctgaacaaggcacctggagtccgaagggtggatgagaga
ccgatcggtgctgagccacagtatcctataagaccagtaatcccccatcctggggatatt
ggtgactttataaatgagggcctgcgtgcggcagacaacgaccccacagcccccccgtac
gactcactgctggtcttcgactacgagggcagcggctccaccgccggctccgtcagttcc
ctcaactcctccagttccggggaccaggactacgactacctgaacgactgggggccgcgc
ttcaagaagctggcggacatgtatggaggaggcgaggaggattga
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