KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128081016
Entry
128081016         CDS       T08967                                 
Symbol
CDH4
Name
(RefSeq) cadherin-4 isoform X1
  KO
K06797  cadherin 4, type 1, R-cadherin
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    128081016 (CDH4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:tpai04515]
    128081016 (CDH4)
Cell adhesion molecules [BR:tpai04515]
 Cadherins
  Major cadherins
   128081016 (CDH4)
SSDB
Motif
Pfam: Cadherin Cadherin_pro CADH_Y-type_LIR Cadherin_4 Stevor DUF5527
Other DBs
NCBI-GeneID: 128081016
NCBI-ProteinID: XP_052539869
LinkDB
Position
Unknown
AA seq 914 aa
MRTGLRLLLLVLLVWGSAAALNGDLTVRPTCKPGFSEEDYTAFVSQNIVEGQKLLKVKFN
NCAGNKGVRYETNSLDFKVRADGTMYAVHEVQMASKQLILMVTAWDPQTLGRWEAIVRFL
VGEKLQHNGHKPKGRKSAPMDLAQQQSDTLLPWRQHQSVKGLRRQKRDWVIPPINVPENS
RGPFPQQLVRIRSDKDKEIHIRYSITGVGADQPPMEVFSIDPVSGRMYVTRPMDREERAS
YHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPEFINQVYNGSVDEGSKPGTYVMTVTAN
DADDSTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYIVIVQAT
DMEGNLNYGLSNTATAIITVTDVNDNPPEFTTSTYSGEVPENRVEVVVANLTVMDRDQPH
SPNWNAIYRIISGDPSGHFTIRTDPVTNEGMVTVVKAVDYEMNRAFMLTVMVSNQAPLAS
GIQMSFQSTAGVTISVTDVNEAPYFPTNHKLIRLEEGVPTGTVLTTFSAVDPDRFMQQAV
RYSKLSDPANWLNINATNGQITTAAVLDRESDYIKNNVYEATFLAADNGIPPASGTGTLQ
IYLIDINDNAPELLPKEAQICEKPNLNVINITAADADIDPNVGPFVFELPSVPSAVRKNW
TITRLNGDYAQLSLRIMYLEAGVYDVPIIVTDSGNPPLYNTSIIKVKVCPCDENGDCTTI
GAVAAAGLGTGAIIAILICIIILLTMVLLFVVWMKRREKERHTKQLLIDPEDDVRDNILK
YDEEGGGEEDQDYDLSQLQQPETMDHVLNKAPGVRRVDERPIGAEPQYPIRPVIPHPGDI
GDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYLNDWGPR
FKKLADMYGGGEED
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgaggaccggcttgcggctgctgctgctggtgctgctcgtctggggctcggcggcggca
ctcaatggggatcttacagttagacccacatgcaagcctggcttttcagaagaagactac
acagcgttcgtttcccagaatattgtggaaggccagaagctactcaaagtaaaatttaat
aactgtgccggtaataagggagttcggtatgaaaccaacagcctggacttcaaagtgaga
gcagatgggaccatgtatgctgtccacgaggtgcaaatggcctcaaagcagttgatcctg
atggtgaccgcctgggatccgcagacccttggcaggtgggaggccatcgtcaggtttctg
gtgggagagaagctgcagcacaatggacacaagccaaagggaaggaagagtgcacccatg
gacctggcacagcagcaaagtgacaccctgctcccctggcgccaacaccagagcgtgaaa
ggcctccggagacagaagcgagactgggtcatcccccccatcaacgtgccagaaaattca
aggggcccttttcctcagcaactggtccggattcgttccgataaggacaaagagatccat
atcaggtacagcatcaccggagtgggagccgaccagccgccaatggaagtcttcagcatt
gaccctgtgtctgggaggatgtatgtgacccgcccgatggacagagaggaaagagcctcc
taccatctccgggctcatgcagtggatatgaatggaaacaaggtggagaatcctattgac
ctttacatctatgtgattgatatgaatgacaacagaccggagtttataaaccaagtctat
aatggatctgttgatgaaggctctaaaccaggtacctacgtgatgacagtgactgcgaat
gacgctgatgacagcaccacggcgaacgggatggtgagataccgaatcgtgactcagacc
ccccagagcccatcgcagaacatgttcaccattaacagtgagacaggagatatcgtcacc
gtggctgctggcctcgacagggagaaagttcagcagtacatagtcatcgttcaagccaca
gatatggaaggaaatcttaactacggtctctcaaacacagcaactgcaatcatcacagtg
acagatgtgaatgacaacccccctgaattcacgaccagcacttattcgggggaagttcct
gagaacagagtggaggttgtggttgcaaatttgacagtgatggacagggaccagcctcac
tctcccaactggaatgccatctaccgcatcatcagcggggacccctctggccacttcacc
atccggacagaccctgtcaccaatgagggcatggtaactgtggtcaaggcagtcgactat
gagatgaacagagcattcatgctgacagtgatggtatccaaccaagcacccctggccagc
ggaatccagatgtccttccagtcgacagcaggagtcaccatttcagttacggatgtcaac
gaagcgccgtacttcccaacgaaccacaagctgatcaggctggaggaaggagtgcccaca
gggactgtcctcacgaccttttcagctgtagatcctgatcgcttcatgcagcaggcagta
agatactctaagctgtcagatcctgcaaactggctgaacattaatgccacaaatggtcag
atcactactgctgctgtccttgatcgagagtcagactacattaagaataatgtctacgag
gccacattcttggcggctgacaatggtatacccccggccagcggcactggcacgctgcag
atctacctaatcgacatcaacgataatgctcctgagctcctgccaaaggaagcacagatc
tgtgaaaagccaaacctgaatgtcatcaatatcacagccgcagatgctgacatcgatcca
aacgttgggccctttgtcttcgagctgccaagtgtgccatctgcggtgaggaagaactgg
accataacacgactgaatggtgattacgcccagcttagtttacggatcatgtacctggaa
gctggtgtgtacgatgtgccaatcatcgtgacggactcaggaaacccccccctgtacaac
acatccatcatcaaagtgaaggtgtgcccgtgtgacgagaatggtgactgcaccaccatc
ggggcggtggctgctgcaggactgggcacgggagccatcatcgccatcctgatctgcatc
attatcttactaaccatggtgctgctgtttgtggtgtggatgaagcgccgggagaaggag
cggcacaccaagcagctcctcattgaccccgaggatgacgtgagggacaacatcctgaag
tacgatgaggagggcggtggagaagaagatcaggattacgacttaagccagctccagcag
ccagagaccatggatcacgtgctgaacaaggcacctggagtccgaagggtggatgagaga
ccgatcggtgctgagccacagtatcctataagaccagtaatcccccatcctggggatatt
ggtgactttataaatgagggcctgcgtgcggcagacaacgaccccacagcccccccgtac
gactcactgctggtcttcgactacgagggcagcggctccaccgccggctccgtcagttcc
ctcaactcctccagttccggggaccaggactacgactacctgaacgactgggggccgcgc
ttcaagaagctggcggacatgtatggaggaggcgaggaggattga

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