Tympanuchus pallidicinctus (lesser prairie-chicken): 128081162
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Entry
128081162 CDS
T08967
Symbol
SDC4
Name
(RefSeq) syndecan-4 isoform X1
KO
K16338
syndecan 4
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04512
ECM-receptor interaction
tpai04514
Cell adhesion molecules
tpai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128081162 (SDC4)
04514 Cell adhesion molecules
128081162 (SDC4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128081162 (SDC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tpai00535
]
128081162 (SDC4)
Proteoglycans [BR:
tpai00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
128081162 (SDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
BLOC1S3
Motif
Other DBs
NCBI-GeneID:
128081162
NCBI-ProteinID:
XP_052540121
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MPLLRAAFLPFLLGLLLAAAAAESVRETETMDAQWLNYPGSGDLPDDEDIAEFTPHLTSD
EFDIDVVSGSGDYSDSDDAMYLTTVDTPVISDNYIPGDRERKIEGEKKNTMLDNEIIPDK
ASPVEENLSNKISMASTANSSIFERTEVLTALIAGGAVGLLFAVFLILLLVYRMKKKDEG
SYDLGKKPIYKKAPTNEFYA
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctccgcgccgccttcctgcccttcctgctcggcctcctgctggccgctgcc
gccgccgagtcggtgagagaaacagaaaccatggatgcccaatggcttaactaccctggc
tctggagacctgccagatgatgaagacattgctgaattcacacctcacttaacttctgat
gagtttgatattgatgttgtatctggctctggagactactcggattctgatgatgccatg
tacctgaccactgtggatactcctgtgatatctgacaactatatccctggagatagggag
agaaagatagaaggcgagaagaaaaacacgatgctggacaatgaaatcattccagacaaa
gcttcacctgttgaagagaacctgtccaacaagatctccatggcaagcacagccaacagc
agcatctttgaaagaacagaagttcttacagctctcattgcaggaggagcagtcggcctc
ctgtttgctgtcttcctgatcctcctcttagtctatcgcatgaagaaaaaggatgaaggc
agctacgacctcgggaagaaacccatctacaagaaagcccctacaaatgagttctacgct
taa
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