KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128081162
Entry
128081162         CDS       T08967                                 
Symbol
SDC4
Name
(RefSeq) syndecan-4 isoform X1
  KO
K16338  syndecan 4
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04512  ECM-receptor interaction
tpai04514  Cell adhesion molecules
tpai04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128081162 (SDC4)
   04514 Cell adhesion molecules
    128081162 (SDC4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128081162 (SDC4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:tpai00535]
    128081162 (SDC4)
Proteoglycans [BR:tpai00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   128081162 (SDC4)
SSDB
Motif
Pfam: Syndecan BLOC1S3
Other DBs
NCBI-GeneID: 128081162
NCBI-ProteinID: XP_052540121
LinkDB
Position
Unknown
AA seq 200 aa
MPLLRAAFLPFLLGLLLAAAAAESVRETETMDAQWLNYPGSGDLPDDEDIAEFTPHLTSD
EFDIDVVSGSGDYSDSDDAMYLTTVDTPVISDNYIPGDRERKIEGEKKNTMLDNEIIPDK
ASPVEENLSNKISMASTANSSIFERTEVLTALIAGGAVGLLFAVFLILLLVYRMKKKDEG
SYDLGKKPIYKKAPTNEFYA
NT seq 603 nt   +upstreamnt  +downstreamnt
atgccgctgctccgcgccgccttcctgcccttcctgctcggcctcctgctggccgctgcc
gccgccgagtcggtgagagaaacagaaaccatggatgcccaatggcttaactaccctggc
tctggagacctgccagatgatgaagacattgctgaattcacacctcacttaacttctgat
gagtttgatattgatgttgtatctggctctggagactactcggattctgatgatgccatg
tacctgaccactgtggatactcctgtgatatctgacaactatatccctggagatagggag
agaaagatagaaggcgagaagaaaaacacgatgctggacaatgaaatcattccagacaaa
gcttcacctgttgaagagaacctgtccaacaagatctccatggcaagcacagccaacagc
agcatctttgaaagaacagaagttcttacagctctcattgcaggaggagcagtcggcctc
ctgtttgctgtcttcctgatcctcctcttagtctatcgcatgaagaaaaaggatgaaggc
agctacgacctcgggaagaaacccatctacaagaaagcccctacaaatgagttctacgct
taa

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