Tympanuchus pallidicinctus (lesser prairie-chicken): 128081201
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Entry
128081201 CDS
T08967
Symbol
SOGA1
Name
(RefSeq) protein SOGA1
KO
K27704
microtubule cross-linking factor
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128081201 (SOGA1)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
128081201 (SOGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TPR_MLP1_2
TSC22
Motif
Other DBs
NCBI-GeneID:
128081201
NCBI-ProteinID:
XP_052540184
LinkDB
All DBs
Position
Unknown
AA seq
1680 aa
AA seq
DB search
MEAASAEPCSPGPPPPPLPEKKKLQRAPSPARPKEVPGWSLARSRRGGSAHSAAASRLGS
GRRRRRPGAAAGGGAAGRGAARAKGRCRGAEPAAGALRPGPGPGPGPGQGCGLTDSSSEV
SDCSASEEAKLMSLELSGSDSESPGSAPPPPPSAGEASPLPEEPSAASMASSRLQLSTSL
AFSDLTEELLDAGTDGLLRELEDLRSENDYLKDEIEELRAEMLEMRDVYMEEDVYQLQEL
RQQLDQASKTCRILQYRLRKAERRSLRVAQTGQVDGELIHSLEQDVKVAKDVSVRLHNEL
EAVEKKRIRLEEENEDLRQRLIETELAKQVVQNEMDKLRENSLKKRGSRSIGKTEKKPSV
QEDSADLKCQLHFAKEESALMCKKLTKLAKENDGMKEELLKYRSLYGDLDSSLSVEELAD
SPHSREAELKVHLKLVEEEANILSRRIVELEVENRGLRAEMDDMKGQGDRELPGQDLRFL
ACTSACGDAGDTVAELRRHLQFVEEEADLLRRSLLELEDQNKLLLNELNKYKSDHELDVT
LSEDSCSVVSEPSQEELATAKVQISELSGKVKKLQYENRVLLSNLQRCDLASCQTTRPML
ETDAEAGDSAQCVPTAGWRDERGSEAEVQDRVLDGSSNTKLLKAKDLETLLGIRDQAALV
SKAIDILISDANGFTSSLKVCLDNECVGGLLAEALDNSSESPSDAKLMNVLLMRLGVLQQ
DLGCFMRKVDLLSSSLKEHSGSFPFSSSHEATKEGLQKEHGSDLQQPDFRDADPYRITHT
KDTDPAHSRSYKTCRPDENDSYATEMKELQLVLSEANESLRGLQEQLSQERQLRKDEVDN
FSQKICQLKEDHQKALLRREFELQSLNLQRRLEQKFWSQEKNLLVQESQQFRQSFLLLFM
KLKWFLKCWRQGKIVHSEGDDFLEVNSMKELYMLLEEEELTPQQQADNRTCSGDAWTPNT
PNECIKTLADMKVTLKELCTELREERRGAGELQQQFTKAKAAWEMERAELKCHIAQLEAK
AGKGITERTLPDWKVALKREREEHQHLLAESYSAVMDLTKQLQISEKNWKQEKVELLARF
KEEQQQAEQQAKDLQNKLNQLQKGANPWALKHSEMEKHGSNWKEALNEKITDKETISEED
AKGTNLKRTKSVSSMSEFESLLDCSPYLPGKTVPGLGDHSRGKKSSAASQLLPNGIRDST
GLPPPNCTYVNIEQPASDSLAKEKLGISSWDYSRASSLTGHDPAQKQMQRSYTAPDKTGI
RIYYSPPVVRRLEAAVVHNKEGKIMIEPGFLFTMAKPKEPEESARTESTYSQWLCNFSKQ
QRELLDGSTGESSVPPVPRFPPSLHDLEISGNMSDDMKEITNCVRQAIRSSSLERKVKST
SSQTVGLAHVGTQTTQTVSVGLQTDLPRGSLHGKSWSPRSSSLVSVRGKQISTSLDKVHA
RIERPCCSPKYGSPKLQRRSSSKLDASKDRSLWNLHQGKQNGSAWARSTTTRDSPVLSNI
NDGLSSLFSVVEHAGSTESIWKPGCPEGGRAKAEAPKYGLVQEFFRNVCGRAQSPTAPPE
KKDAGGGEEGSKKTEHPSLASYHPTENTSRILSKKVLKQSSCEDPKLMSLGQGSKEAFPR
DPDFISAMASEDMACDCSSQSLTSCFARPSRSAARHSPSKCRLHPIDMPRAEEKPGPLSE
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcttcggcggagccgtgctcgcccgggccgccgccgcctccgctcccggag
aagaagaagctgcagcgggcgccgtcaccggcgcggcccaaggaggtgccgggctggtcg
ctggccaggagccggcgcggcggctccgcgcactcggcggcggcctcgaggctcggcagc
gggcggcggcggcggcggcccggggcggcggcaggggggggggcggcgggccgcggagcg
gcgagggcgaaggggcggtgccgcggggcggagccggcggccggggcgctgcgaccggga
ccggggccgggaccgggaccggggcaggggtgcggcctgacggacagcagctccgaggtg
tcggactgcagcgcctcggaggaggcgaagctcatgtcgctggagctcagcggcagcgac
agcgaatccccgggcagcgccccgccgccgccgccctcggccggggaggcctcgccgctg
cccgaggagccctcggccgcctccatggccagcagccgcctgcagctcagcacctcgctc
gccttctccgatctcaccgaggagctgctggacgccggcaccgacgggctgctccgcgag
ctggaggacctgcgctccgagaacgactatctcaaggatgagattgaggagctgcgcgcc
gagatgctggaaatgagggacgtctacatggaggaggacgtctaccagctgcaggagctg
cggcagcagctggaccaagccagcaagacgtgccgcatcctgcagtaccgcctgcgcaag
gccgaacggcgcagcctgcgtgtggcacagaccggccaggtggatggcgagctcatccac
agcctggagcaggacgtcaaggtggccaaggatgtctccgtgcggctccacaacgagctg
gaggcggtggagaagaaaaggatcaggctggaagaggagaacgaggacctgcgccagaga
ctgatcgagacagagctggctaagcaggtggtacagaatgagatggacaagctcagagag
aattccctgaagaaaagggggtctcgctccattgggaagactgagaagaagccatcggtg
caggaggacagcgcggacctgaagtgccagctgcactttgctaaggaggagtcggccctg
atgtgcaagaagctgaccaagctggccaaggagaacgatggcatgaaggaggagcttctg
aagtacaggtccctctacggggacctcgacagctctctgtccgtggaggagcttgccgac
tcaccccactcacgtgaggctgagctcaaggtccacctcaagctggtggaagaagaagcc
aacatcctcagccgcaggattgtggagctggaggtggagaaccgcggcctgcgggctgag
atggacgacatgaagggccagggggacagggaactaccagggcaggatctgcggttcctg
gcctgcacctcggcctgcggggacgcgggggacacggtggcagagctgcgacggcacctg
cagtttgtggaggaggaggccgacctgctgcgccgctcactgctggagctggaggaccag
aacaagctcctgctgaacgagctcaacaaatacaagtcggaccacgagctggatgtgacg
ctgtcagaggacagctgctcagtggtcagcgagccctcgcaggaagagctggccacggct
aaggtgcagatcagtgagctgagcggcaaggtgaagaagctgcagtacgagaaccgggtt
ctcctctccaacctgcagcgctgtgacctggcctcctgccagaccacccggcccatgctg
gagaccgacgctgaggccggcgactcagcgcagtgcgtgcccactgctggctggagggat
gagcgtggcagtgaggctgaggtgcaggaccgggtgctggacggcagttccaacaccaag
ctgcttaaggccaaggacttggagaccctgctgggcatccgagaccaagcagcgcttgtc
agcaaagccatcgacatcttgatttcggatgccaatggcttcacctccagcttgaaggtg
tgcctggacaacgagtgcgtgggggggctgctggctgaggccctggacaacagcagcgag
agccccagcgacgccaagctgatgaatgtgctcctcatgaggctgggtgtgctgcagcaa
gatctgggctgcttcatgcggaaggtggacctcctctccagcagcctcaaggagcactcc
ggctccttccccttctccagcagccacgaggccaccaaagaggggctgcagaaggagcat
ggctctgacttgcagcagcctgattttagggatgccgacccttaccgcatcacccacacc
aaggacacggaccccgcacattcccggagctacaaaacctgccgacctgacgagaacgac
tcctatgccaccgagatgaaggagctgcagctggtgctgtcggaggccaatgagagcctg
cgggggctgcaggagcagctctcgcaggagaggcagttgcggaaggacgaggtggacaac
ttctcacagaagatctgccagctaaaagaggaccaccagaaagccctgctgcggcgtgag
tttgaactgcagagcctcaacctgcagaggcggctggagcaaaagttctggagccaggag
aagaacctgctggtgcaggagtcacagcagttcaggcaaagcttccttctgctcttcatg
aagctcaagtggttcctcaagtgctggcgccaaggcaagatagtgcacagcgagggcgat
gacttcctggaggtgaacagcatgaaggagctgtacatgctgctggaagaggaggagctc
acaccacagcagcaggcagacaacaggacctgctctggggacgcctggactcccaacacg
cccaacgagtgcatcaagacactggcagacatgaaggtcaccctgaaggagctgtgcaca
gagctgcgggaggagcggcgtggtgcaggcgagctgcagcagcagtttaccaaggccaag
gctgcctgggagatggagcgcgccgagctcaagtgccacatcgcccagctggaggcaaaa
gcaggcaaaggcatcacggagcggacgttaccagactggaaggtggcactgaagagggag
cgtgaggagcatcagcatctcctggctgaatcctacagcgccgtcatggacctgaccaag
cagctgcagatcagcgaaaagaactggaaacaggagaaagtggagctgctggcccgcttc
aaggaagagcagcagcaggcagagcagcaagcgaaggatctgcagaacaaactcaaccag
ttgcagaaaggagccaacccgtgggctttgaaacactccgaaatggagaagcatggcagc
aactggaaagaggctctgaatgaaaaaatcacagacaaagagacaatctctgaagaagat
gccaagggaaccaacttaaaaaggaccaagtccgtttcctccatgtcagagtttgaaagc
ttgctcgactgttctccctacctccctggaaagactgtgcctgggctgggtgaccattcc
cgaggcaaaaagtcatctgcagcctcccagctgctgcccaacgggatccgggatagcacc
ggccttcctccccctaactgtacctatgtgaatatcgagcaacccgcctccgacagcctg
gccaaggagaagctgggcatctcctcctgggactactcacgggccagcagcctcacgggc
catgacccagctcagaaacagatgcagaggagctacacagcacctgacaagacagggatc
cgcatctactacagccctcctgtggtgcggcgcctggaggcagctgtggtgcacaacaag
gaggggaagatcatgatcgagcccggcttcttgttcaccatggccaagcccaaggagcct
gaggagtcggccaggacagaaagcacatacagccagtggctgtgcaacttctccaagcag
cagcgagagctgctcgatggcagcaccggggagagcagtgtgccaccagtgccccgcttc
cctccctcgctgcacgacctggagatctccggtaacatgagtgacgacatgaaggagatc
accaactgtgtgcgccaggccatccgctccagctcactggagaggaaagtgaagagcacc
tcgagccagaccgtggggctggcccacgtggggacacagaccacacagacagtgagcgtg
ggcctgcagacagacctgccgcgcggcagcttgcatggcaagagctggtccccgcgcagc
tcctcgctcgtctcagtgcgcggcaagcagatctccacctccctggacaaggtgcacgcc
aggatcgagcggccctgctgctcacccaagtacggctcgccaaagctgcagcggagatct
tcctccaagctggatgcctccaaggacaggagcctttggaacctgcaccagggcaagcag
aacggctccgcctgggcccgctccaccaccactcgtgacagccccgtcctcagcaacatc
aacgatggcctgtccagcctcttcagtgtggtggagcatgcgggcagcaccgagtccatc
tggaagccgggctgccctgagggcggcagggccaaagctgaggcccccaagtacggcctg
gtgcaggagttcttcaggaatgtttgtgggcgggcgcagagccccacagcccccccagag
aagaaagatgctggtggtggggaggagggctccaagaagaccgagcatcccagcctggcc
tcctatcaccccactgagaacacctcccgcatcctgagcaaaaaagtcctcaagcaaagc
agctgtgaggaccccaagctgatgtcccttggccaagggagcaaagaagcattcccccgg
gaccctgacttcatctcagccatggccagcgaggacatggcatgcgactgcagctcacag
tccctcacctcctgctttgcccggccgtcccgctccgccgcccgccactcgccctccaag
tgcaggctgcaccccatagacatgcccagggcagaggagaagcccgggccactgagtgag
tga
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