Tympanuchus pallidicinctus (lesser prairie-chicken): 128081310
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Entry
128081310 CDS
T08967
Symbol
SYNPO
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128081310 (SYNPO)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
128081310
NCBI-ProteinID:
XP_052540373
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MLKAPLRQESDSGDVPDPELPTGSTNTEPAASSDFCAPSPASQLPPTAASLMDDPSQEWR
LVKIKRVLIAPSSEPRKASLSRSSSLSEKELKEAKARSRRIVAQLTTAPSPSSKGVLLFH
RRRQRIDGLTGTGTGHGTGLPLSLGTQRGDMETGEGHGSQGTLGEKENVASHRESPTEAQ
QVPLSIYLKENMALAAANGVHKEKVESEVGGVQGTQDSLGTRVVTPAPPESMCIPKQKNG
EVPSPPVVTANAPMGTASTAMGTAGTPVGTDSVSMGTATMPVVTANMTVRTASTPIGMAS
TPVVTASAPMVTASVPTGVAVANTAVVTASTPMVSANITTGTPSVPMVTASTPTGTASMP
IGTASTHIVTTSVPMGTASTPMVAANIPMKMAEAATGMANAPMGTASPPVVTSSAPVVTS
NIPTVTASTPPGMAPPATRAQSGAQGRQYYEVQLTLAKPKPVKNRTARPFGTQTAPGLSQ
PPERDPGAEPPPPTYAETLGSPPPLSRVRSPPTYSTLYPPEEQKALPGPGYGLAAVLPLP
KTGILEESAARRGHKKSMFTFVEKPKLGPNPDLLDLVQSADIRKKQKEHGDPGAEDEPFA
LGAEAANFVPASTSRPVQALPVPNDAPAWSSCLKSPMVKPKPKPQPSHNLSEARGKGAEL
FARRQSRMEKFIIEAPSRPELPRSPSPTMSLPPSWKYDANACLSPMVSRHPTRSPSQPSK
TPPASLYGNNPMENEVELSKHQPYQLQPSLFILSPSKAPARSMPPPRPSPPSSYSYPQHT
SCPTSPLPPSPIWQPPTTHGASSSLFPSSTGAVPMPHGAGGGGAELLLASPCHGRSPRAK
GGFQAPRPSYSTRNAGIEPQERRPSLPASPTWTPRLARHQGSQDGWASPVSVPELEQGPP
RSPPWSERSLSPQRQDAEPRASRQMQARLARNIINAARRKSSSPKPPGPEGSRPFTPPAV
VPPGLPQGCKAAAPQRARSVLAAPGSPSPSHKSPLTEGSCASPGVSRATWAEGRRLLLPP
SPAGPSPTPKSPLPSPVVGARSPAKRYSSRSPTDSDVSIDSEDSGTKSPGIHSFNLCPRG
WSGSLRLKAGGIPSGAPCTS
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaggcaccgctgagacaggagagcgacagcggggacgtcccggaccctgagctc
cccacaggcagcacaaacaccgagcctgcagcttcctcagatttctgtgcccccagtcct
gcctcacagctgcccccaacagcagccagcctcatggacgaccccagccaggagtggagg
ttggtgaagatcaagcgcgtcctcatcgctccctccagcgagcccaggaaagcaagtctc
tcccgcagctccagcctctctgagaaggagctgaaagaggcaaaagcgcggagccgcagg
atcgtggcacagctcaccacggcacccagccccagctccaagggcgtgctgctcttccac
cgccgcaggcagcgcatcgacgggctcactgggactggcacagggcatggcacggggctg
ccgctgagcctggggacacagcgaggggacatggagacgggcgaggggcacggcagccag
gggacgctgggggagaaggagaacgtggcatctcaccgggagtcccctactgaggctcag
caagtcccattgagtatctacctgaaggagaacatggcactggctgctgccaatggtgtg
cacaaggagaaggtggagagtgaagtgggaggggtccaggggacacaggacagcttgggg
acaagagtagtcactcctgccccaccagagagcatgtgcattcctaagcagaagaatggt
gaggtgcccagtccgcctgtagtgacagccaatgcacccatggggacggccagcacggcc
atggggacagccggcacacctgtggggacggacagtgtatccatggggacagccaccatg
cctgtggtgacagccaacatgaccgtgaggacagccagcacgcccatagggatggctagt
acacctgtggtgacagctagtgcacccatggtgacagccagtgtacctactggtgtggca
gtggccaacacagctgtggtgacagccagtacgcccatggtgtcagccaacataaccaca
gggacacccagcgtccccatggtgacagccagtactcccactgggacagccagcatgccc
atagggacagccagcacccatatagtgacaaccagcgtgccaatggggacagccagcaca
cccatggtggcagccaacataccgatgaagatggccgaggcagccacgggaatggccaat
gcacccatggggacagcaagtccacccgtagtgacatccagtgcaccggtggtgacatcc
aacatacccacagtgacggccagcacacccccagggatggctcccccagccacacgagca
cagagcggggctcagggcaggcagtactacgaggtccaactcaccctggccaaacccaaa
ccggtgaagaaccgcacggcgcggccgtttggcacccagacagcccctgggctgagccag
cctccggagcgagaccctggtgctgagcccccaccacccacctatgcagaaacgctgggc
agcccacccccgctcagcagggtccgctcgccccccacctactcgaccctgtacccccct
gaggagcagaaggcgctgccaggccccggttatgggctggcggcggtgctccccttgccc
aaaacgggcatcctggaggagtcggcggcacgtaggggccacaagaagtccatgttcacc
tttgttgagaagcccaagttgggccccaaccccgacctgctggatttggtgcagagcgca
gacatcaggaagaagcagaaggagcatggggatcccggtgctgaggatgagccctttgct
ttgggggctgaagctgccaactttgtccccgccagcacatccaggcctgtgcaggccctc
ccggtgcccaatgatgccccagcatggtcctcctgcctcaagtcccccatggtgaagccg
aagccgaagccgcagcccagccacaacctgagcgaggccagagggaagggggctgagctc
tttgcccgccggcagtcccgcatggagaagttcatcatcgaggctccctcccggcccgag
ctgccgcgctccccatcgcccaccatgtctctgcctccctcctggaagtacgatgccaac
gcttgcctgtcacccatggtctccagacaccccaccaggagtccctcccagccctccaaa
accccccctgcttctctctacggcaacaaccctatggagaacgaagtggagctctccaag
caccagccctaccagctccagccttcgctcttcatcctctccccgtccaaagctccagcg
aggtccatgccaccacccagaccctcacctcccagctcttactcctacccacagcacacc
tcctgccccacctccccgctgcctccgtcccccatttggcaacctcccaccacacacggg
gcctcttccagccttttccccagcagcaccggggctgtgcccatgcctcacggtgccgga
ggcggtggtgcagagctgctgctggcatcgccgtgccacgggcgctcccctcgagccaag
ggtggcttccaggcgcctcgaccctcctactccaccaggaacgcagggatcgagccacag
gaaaggcggccgtctctccccgcctcgcccacctggaccccgcggctggcgcggcaccag
ggcagccaggacggctgggccagccccgtctcggtgcccgagctggagcaggggccgccc
cggtccccgccctggagcgagcgctctctgtccccgcagcggcaggacgccgagccccgc
gccagccgccagatgcaagcgcggctcgccaggaacatcatcaacgcagcccgcaggaag
agctcctctcccaaacccccggggccggaaggctcccggcccttcacccccccggccgtg
gttccccccggtttgccgcaggggtgcaaagccgctgccccgcagcgggcccgcagcgtg
ctggctgcgccgggcagcccctcgccgtcgcacaaatcgcccctcacagaggggtcctgt
gcctcccccggggtgtcccgagccacctgggcagagggccgccggcttctgctgccaccc
agtccggccgggccgtcccccaccccaaagagccctttgccatcgccggtggtgggcgca
cgctcccctgccaagcgctacagctcccggtccccgacggactcggacgtctccatcgac
tccgaagattcgggaaccaagagcccgggcatccacagcttcaacctgtgtccgcggggc
tggagcgggagcctgaggctgaaagcgggggggataccgtcgggggccccctgcacctct
tag
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