KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128081310
Entry
128081310         CDS       T08967                                 
Symbol
SYNPO
Name
(RefSeq) synaptopodin
  KO
K21112  synaptopodin
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04530  Tight junction
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    128081310 (SYNPO)
SSDB
Motif
Pfam: Calsarcin
Other DBs
NCBI-GeneID: 128081310
NCBI-ProteinID: XP_052540373
LinkDB
Position
Unknown
AA seq 1100 aa
MLKAPLRQESDSGDVPDPELPTGSTNTEPAASSDFCAPSPASQLPPTAASLMDDPSQEWR
LVKIKRVLIAPSSEPRKASLSRSSSLSEKELKEAKARSRRIVAQLTTAPSPSSKGVLLFH
RRRQRIDGLTGTGTGHGTGLPLSLGTQRGDMETGEGHGSQGTLGEKENVASHRESPTEAQ
QVPLSIYLKENMALAAANGVHKEKVESEVGGVQGTQDSLGTRVVTPAPPESMCIPKQKNG
EVPSPPVVTANAPMGTASTAMGTAGTPVGTDSVSMGTATMPVVTANMTVRTASTPIGMAS
TPVVTASAPMVTASVPTGVAVANTAVVTASTPMVSANITTGTPSVPMVTASTPTGTASMP
IGTASTHIVTTSVPMGTASTPMVAANIPMKMAEAATGMANAPMGTASPPVVTSSAPVVTS
NIPTVTASTPPGMAPPATRAQSGAQGRQYYEVQLTLAKPKPVKNRTARPFGTQTAPGLSQ
PPERDPGAEPPPPTYAETLGSPPPLSRVRSPPTYSTLYPPEEQKALPGPGYGLAAVLPLP
KTGILEESAARRGHKKSMFTFVEKPKLGPNPDLLDLVQSADIRKKQKEHGDPGAEDEPFA
LGAEAANFVPASTSRPVQALPVPNDAPAWSSCLKSPMVKPKPKPQPSHNLSEARGKGAEL
FARRQSRMEKFIIEAPSRPELPRSPSPTMSLPPSWKYDANACLSPMVSRHPTRSPSQPSK
TPPASLYGNNPMENEVELSKHQPYQLQPSLFILSPSKAPARSMPPPRPSPPSSYSYPQHT
SCPTSPLPPSPIWQPPTTHGASSSLFPSSTGAVPMPHGAGGGGAELLLASPCHGRSPRAK
GGFQAPRPSYSTRNAGIEPQERRPSLPASPTWTPRLARHQGSQDGWASPVSVPELEQGPP
RSPPWSERSLSPQRQDAEPRASRQMQARLARNIINAARRKSSSPKPPGPEGSRPFTPPAV
VPPGLPQGCKAAAPQRARSVLAAPGSPSPSHKSPLTEGSCASPGVSRATWAEGRRLLLPP
SPAGPSPTPKSPLPSPVVGARSPAKRYSSRSPTDSDVSIDSEDSGTKSPGIHSFNLCPRG
WSGSLRLKAGGIPSGAPCTS
NT seq 3303 nt   +upstreamnt  +downstreamnt
atgctgaaggcaccgctgagacaggagagcgacagcggggacgtcccggaccctgagctc
cccacaggcagcacaaacaccgagcctgcagcttcctcagatttctgtgcccccagtcct
gcctcacagctgcccccaacagcagccagcctcatggacgaccccagccaggagtggagg
ttggtgaagatcaagcgcgtcctcatcgctccctccagcgagcccaggaaagcaagtctc
tcccgcagctccagcctctctgagaaggagctgaaagaggcaaaagcgcggagccgcagg
atcgtggcacagctcaccacggcacccagccccagctccaagggcgtgctgctcttccac
cgccgcaggcagcgcatcgacgggctcactgggactggcacagggcatggcacggggctg
ccgctgagcctggggacacagcgaggggacatggagacgggcgaggggcacggcagccag
gggacgctgggggagaaggagaacgtggcatctcaccgggagtcccctactgaggctcag
caagtcccattgagtatctacctgaaggagaacatggcactggctgctgccaatggtgtg
cacaaggagaaggtggagagtgaagtgggaggggtccaggggacacaggacagcttgggg
acaagagtagtcactcctgccccaccagagagcatgtgcattcctaagcagaagaatggt
gaggtgcccagtccgcctgtagtgacagccaatgcacccatggggacggccagcacggcc
atggggacagccggcacacctgtggggacggacagtgtatccatggggacagccaccatg
cctgtggtgacagccaacatgaccgtgaggacagccagcacgcccatagggatggctagt
acacctgtggtgacagctagtgcacccatggtgacagccagtgtacctactggtgtggca
gtggccaacacagctgtggtgacagccagtacgcccatggtgtcagccaacataaccaca
gggacacccagcgtccccatggtgacagccagtactcccactgggacagccagcatgccc
atagggacagccagcacccatatagtgacaaccagcgtgccaatggggacagccagcaca
cccatggtggcagccaacataccgatgaagatggccgaggcagccacgggaatggccaat
gcacccatggggacagcaagtccacccgtagtgacatccagtgcaccggtggtgacatcc
aacatacccacagtgacggccagcacacccccagggatggctcccccagccacacgagca
cagagcggggctcagggcaggcagtactacgaggtccaactcaccctggccaaacccaaa
ccggtgaagaaccgcacggcgcggccgtttggcacccagacagcccctgggctgagccag
cctccggagcgagaccctggtgctgagcccccaccacccacctatgcagaaacgctgggc
agcccacccccgctcagcagggtccgctcgccccccacctactcgaccctgtacccccct
gaggagcagaaggcgctgccaggccccggttatgggctggcggcggtgctccccttgccc
aaaacgggcatcctggaggagtcggcggcacgtaggggccacaagaagtccatgttcacc
tttgttgagaagcccaagttgggccccaaccccgacctgctggatttggtgcagagcgca
gacatcaggaagaagcagaaggagcatggggatcccggtgctgaggatgagccctttgct
ttgggggctgaagctgccaactttgtccccgccagcacatccaggcctgtgcaggccctc
ccggtgcccaatgatgccccagcatggtcctcctgcctcaagtcccccatggtgaagccg
aagccgaagccgcagcccagccacaacctgagcgaggccagagggaagggggctgagctc
tttgcccgccggcagtcccgcatggagaagttcatcatcgaggctccctcccggcccgag
ctgccgcgctccccatcgcccaccatgtctctgcctccctcctggaagtacgatgccaac
gcttgcctgtcacccatggtctccagacaccccaccaggagtccctcccagccctccaaa
accccccctgcttctctctacggcaacaaccctatggagaacgaagtggagctctccaag
caccagccctaccagctccagccttcgctcttcatcctctccccgtccaaagctccagcg
aggtccatgccaccacccagaccctcacctcccagctcttactcctacccacagcacacc
tcctgccccacctccccgctgcctccgtcccccatttggcaacctcccaccacacacggg
gcctcttccagccttttccccagcagcaccggggctgtgcccatgcctcacggtgccgga
ggcggtggtgcagagctgctgctggcatcgccgtgccacgggcgctcccctcgagccaag
ggtggcttccaggcgcctcgaccctcctactccaccaggaacgcagggatcgagccacag
gaaaggcggccgtctctccccgcctcgcccacctggaccccgcggctggcgcggcaccag
ggcagccaggacggctgggccagccccgtctcggtgcccgagctggagcaggggccgccc
cggtccccgccctggagcgagcgctctctgtccccgcagcggcaggacgccgagccccgc
gccagccgccagatgcaagcgcggctcgccaggaacatcatcaacgcagcccgcaggaag
agctcctctcccaaacccccggggccggaaggctcccggcccttcacccccccggccgtg
gttccccccggtttgccgcaggggtgcaaagccgctgccccgcagcgggcccgcagcgtg
ctggctgcgccgggcagcccctcgccgtcgcacaaatcgcccctcacagaggggtcctgt
gcctcccccggggtgtcccgagccacctgggcagagggccgccggcttctgctgccaccc
agtccggccgggccgtcccccaccccaaagagccctttgccatcgccggtggtgggcgca
cgctcccctgccaagcgctacagctcccggtccccgacggactcggacgtctccatcgac
tccgaagattcgggaaccaagagcccgggcatccacagcttcaacctgtgtccgcggggc
tggagcgggagcctgaggctgaaagcgggggggataccgtcgggggccccctgcacctct
tag

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