Tympanuchus pallidicinctus (lesser prairie-chicken): 128081313
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Entry
128081313 CDS
T08967
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128081313 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpai03041
]
128081313 (RBM22)
Spliceosome [BR:
tpai03041
]
Complex B
Other components
Prp19-related factors
128081313 (RBM22)
Complex C
128081313 (RBM22)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
128081313
NCBI-ProteinID:
XP_052540379
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MSTSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDEMPKSDVNKEYYTQN
MEREIANSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKTITTLYVGGLG
DTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKDKEGTTESGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHAMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtcgctgggctccaacacttacaaccggcagaactgggaggatgcggacttc
cctattctgtgccagacgtgtcttggagaaaacccgtacattcgcatgaccaaagagaaa
tatggaaaagaatgcaagatttgtgccaggcctttcacagtgttccgctggtgtcctggt
gttcggatgcgtttcaagaagacagaagtgtgccagacctgcagcaagttgaagaatgtc
tgtcaaacctgtctgcttgacctggaatatggtttgcctattcaagtccgggatgcagga
ctgtcccttaaggatgaaatgcctaaatctgatgtcaataaagagtactacacccagaac
atggagcgagagatagccaactctgatggcactagaccagtgggtgcactaggaaaagct
acttctaccagtgacatgctgttgaagctggctcggaccactccttactacaaacgtaat
cgtcctcacatctgttccttctgggtaaaaggggaatgcaagagaggagaagaatgtcct
tacaggcatgagaagcctacagatccagacgatcctctggctgatcagaatatcaaggat
cgttactatggaatcaatgatcctgtagctgataagctgctgaaacgagcatcgaccatg
cctcgactggaccctcctgatgataagaccatcactacgctgtacgttggagggcttgga
gatactatcactgaatcagatctcagaaatcacttctaccagtttggggagatccggacg
ataacagtcgtgcagaggcagcagtgtgctttcatccagtttgccacccgacaagctgca
gaagtggctgctgagaaatccttcaacaagctcattgtcaacggccgcaggctcaatgtc
aagtggggaaggtcccaggcagcgagaggtaaagagaaggacaaggaaggtactacagaa
tccgggataaagctggagccggttccaggacttcccggagccctcccacctcctccagct
gcagaagaggaggcttctgcaaattacttcaatctacctcctagtggccctccagctgtg
gttaacatcgccctgccgccgcctcctggcattgctccaccaccacctccaggctttgga
ccacacatgttccacgccatggggccaccgcctcccttcatgagagccccaggccccatt
cactacccttctcaagatccccagaggatgggtgcccacgcaggaaagcacagcagcccc
tag
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