KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128081357
Entry
128081357         CDS       T08967                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    128081357 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tpai03021]
    128081357 (TAF5L)
   03036 Chromosome and associated proteins [BR:tpai03036]
    128081357 (TAF5L)
Transcription machinery [BR:tpai03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     128081357 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     128081357 (TAF5L)
Chromosome and associated proteins [BR:tpai03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     128081357 (TAF5L)
    STAGA complex
     128081357 (TAF5L)
    TFTC complex
     128081357 (TAF5L)
    SAGA complex
     128081357 (TAF5L)
    SLIK complex
     128081357 (TAF5L)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd TFIID_NTD2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_Aladin ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_RIG_2nd NBCH_WD40 Tricorn_2nd Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR19_1st PEP5_VPS11_N PROPPIN Ge1_WD40 WD_LRWD1 eIF2A Mala_s_1-like Nbas_N
Other DBs
NCBI-GeneID: 128081357
NCBI-ProteinID: XP_052540465
LinkDB
Position
Unknown
AA seq 589 aa
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSA
APCLPEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNALCKVLTLHIHLDVQPSKRTDYQLYASGSSSRNESNGLEPSEVPASILQNEAALE
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSK
KLKSEPHLVDVSRIRLACDILDEEEEEDDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLR
IYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCNAPADGSSSELVGVYTGQMNNVLSIQFMACNLLLVTGIAQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgcgtacgcacagaacagattcagatggcagtgtcctgctacctcaagcgccgt
cagtatgtggactcagaaggtcccctaaaacaagggctgaggctgtgtcagactgctgaa
gagatggcagctaatctcacagtccaatctgaatctggttgtgccaacgttgtgtctgca
gctccctgcctgccggagccacagcaatatgaagtacaatttggacgactacgcaatttt
ctcacagattcagattctcagcacagccatgaagtgatgcctcttctgtatcccctcttc
gtctacctccatctgaacatggtccagaatggcctaaaaagcacagtggacagtttttac
agccgcttccatggcatgttcttgcagaatgccagccagaaggatatcattgagcagtta
cagactaccatgactattcaagatatcctgtccaacttgaagctccgggcttttctggac
aacaagtacgtcatccgccttcaagaggacagctacaactaccttcttcgctacctccaa
agtgacaacaacaacgccctgtgcaaagtcctgaccttgcacatccacctggatgtgcag
ccctccaagaggaccgactaccagctctacgccagtgggagctcctcgcggaatgagagc
aacgggctggagcccagcgaggtaccagcttccatcttgcagaatgaggcagcgctggaa
ttactgcaggacagcattaaacgcgtcaaggatgggcccccttccttaacaaccatctgc
ttctatgccttctataacacagagcaattgctgaacacggcagagatttcaccaaatagc
aagctgcttgctgctgggtttgataattcatgcgttaagctgtggagcctgcgttccaag
aagttaaaatctgagccccatcttgttgatgtgtcccgcatccgcctggcttgtgatatc
ctggatgaggaggaggaagaggatgacagcgcaggcacagaaatgaaaatcctgagagga
cactgtgggcctgtgtatagcaccaggttcctttccgacagctcaggacttttgtcttgt
tctgaggacatgtccatcagatactgggacctcggaagtttcacaaacactgtgttgtac
caaggacatgcctaccctgtctgggatttggacatcagtccctgcagcctgtactttgcc
agcgcctcccatgatcgcaccgcaaggctctggtcgtttgatcggacgtaccctctgcga
atatatgcaggccatttactggatgtagactgtgtcaagttccaccccaattccaactac
ttagcgacaggctccacagacaagactgtgcgcttatggagcactcagcaaggcaactcg
gtgcgcctgttcaccgggcatcgtggccccgtgctggcacttgcattttctcccaatggt
aagtacctggcctcggcgggtgaagaccagcggctaaagctgtgggacttggcttcagga
actctctacaaagaactgagggggcacacggacaacataaccagccttacttttagccct
gacagtagtttaattgcttcggcctcgatggacaattctgtccgggtgtgggacatccgt
aacacgtactgcaatgcccctgccgatgggtcttccagtgaactggttggtgtatatacc
ggacaaatgaataatgtgctgagcatacagtttatggcctgtaatcttcttctagtgact
ggaattgcacaagaaaatcaggaacattaa

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