Tympanuchus pallidicinctus (lesser prairie-chicken): 128081385
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Entry
128081385 CDS
T08967
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128081385
Cell adhesion molecules [BR:
tpai04515
]
Cadherins
Protocadherins
128081385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_tail
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
128081385
NCBI-ProteinID:
XP_052540508
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MGTGASCGRGQLSLPSFLLLLLLLSLLAAPHSTGGQLRYAVPEELEHGAFVANLGEDLGL
DASTLSARRFRIVAGAGARQHLEVNLENGILFVNERIDREEVCETGGTCLLHLQLLVESP
LELYRVEVEVLDINDHAPTFPWQEYVLEVAESAMLGARFPLESAQDPDVGTNSVHTYQLS
PNGFFSLEVQTRSDASKFAELVLERALDREQQRTHRLLLTALDGGIPRRSGTAHVLVTVL
DANDNIPAFDQPSYGVSLPEDAPTGTLVIQLNATDLDEGPNGEIEYSFSGHAPPSVRELF
RVEPRSGQVLLKGPLDYERASLHELYVQAKDRGPSAVAVHCRVLVHLLDVNDNAPEVTLT
SVSTPVQEDAPPGTVIAVISVLDRDSGDNGRVSCELSPSVPFELRSSFRNYYTLVTTEPL
DREAVSEYNISITARDMGSPALLTRSTLTVPVSDVNDNAPHFLQPSYSVYVMENNAPGAS
ICSVSALDPDCQQNAYLSYSITDGHIHGMPVGTYVSINSDSGHMYALRSLDYEQIRSFQI
QVQAQDAGFPPLSANVTVHIFVLDQNDNAPVIVSPMPRNGSVATELVPRSAGPGYLVGTV
SAVDADAGLNSRLSYQLLQATDFTLFSLAPDTGELRTLRSFLEQDAARQRLVVQVRDGGQ
PSLSATVSLLLSVVETMPQTLSDFSNFSLPPEASSSSALTLYLLVSLGSISFTFLLAILI
LTAIRCRGMRYPWQGDGCCCCPRPRRSPDGLKTSNLAAQPGASTATHLDVPDGGPPGYCY
KLCLGPESAQSDFMFLKPCSLPRNNEKGPGNLPGKRTRPGQPLQGSKQIKQPNTDWLPPS
VQRPALKSSQSLEDVGEIRKALQKEHERLCTLVTPVSEFQKASAGTNSIWAPQYGPLYPG
HVPAPDYQHNVYIPGTPTLLSSKDGPLVPGRESKNSFSTFGKRKKMTTYYDMPDSVIINN
DLK
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggggaccggggcaagttgcgggagggggcagctttcccttccctccttcctcctcctc
ctcctcctcctctccctcctggccgcgccgcactccacgggtgggcagctgcgctatgcc
gtgcccgaggagctggagcacggagccttcgtggccaacctcggcgaggacctggggctg
gacgcgtccacgctgtcggcgcggcggttccgcattgtggccggggccggggcgaggcag
catctggaggtgaacctggagaacgggatcctctttgtgaacgagcggatcgaccgggag
gaggtgtgcgaaacagggggcacctgcctgctccacctgcagctgctcgtcgagagcccc
ctggagctgtaccgtgtggaggtggaggtgctggacatcaacgaccacgctcccaccttc
ccctggcaggaatacgtgctcgaggtggctgagtccgccatgctgggtgcccgcttcccg
ctcgagagcgcccaggatcccgacgtgggcaccaactcggtgcacacctaccagctcagc
cccaatggcttcttctcgctcgaggtgcagacacgcagcgacgccagcaagtttgcagag
ctggtgctggagcgcgccctagaccgtgagcagcaacgcacgcaccggctgctgctcact
gcgctcgatggtggcatccccaggcgctcgggcacagcccacgtcctcgtcaccgtgctg
gacgccaacgacaatatccccgcctttgaccaaccctcgtacggagtgagcctgcctgag
gatgcccccaccggcaccttggtcatccagctgaacgccaccgacctggacgagggcccc
aacggggagatcgagtactccttcagcgggcatgcaccaccaagtgtccgagagctcttc
cgcgtggagccccgcagtgggcaggtactgctgaagggccctctggactacgagcgtgcc
agcctgcacgaactctacgtgcaagccaaggaccgtgggccctcggcggtggctgtgcac
tgccgggtgcttgtgcacctcctcgatgtgaacgacaacgcgcccgaggtgaccctcacc
tcggtttccacgccggtgcaggaagatgccccaccgggcaccgtcatcgcagtcatcagt
gttctggaccgggactccggagacaacggccgtgtgagctgtgagctgagccccagtgtg
ccctttgagctccgctcctccttccgcaattactacacactggttaccacagagccactg
gaccgggaggcggtgtccgagtacaacatcagcatcaccgcccgggacatgggatcccca
gccctgctgacccgcagcaccctcaccgtgccggtgtccgatgtgaatgacaacgccccg
cacttcctgcagccctcctacagcgtctacgtgatggagaacaacgcgccaggggcctcc
atctgttccgtcagcgctctggatcccgactgccagcagaacgcctacttgtcctactcc
atcaccgacgggcacatccatggcatgcctgtgggcacctacgtgtccatcaactcagac
agcgggcacatgtatgccctacgctcccttgattatgagcagatccgcagcttccagatc
caggtgcaagcgcaggatgcgggcttccccccgctcagtgccaatgtcaccgtgcacatc
ttcgtgttggaccagaatgacaacgctcccgtcatcgtgtcccccatgccgcgcaatggc
tctgtggccaccgagctggtgccgcgctccgccgggcctggctacctggtgggcacagtg
tcagcagtggatgcagatgcagggctgaactcccgcctgtcataccagctgctccaggcc
accgacttcacattgttcagcctggcaccggacactggtgaactgcgcaccctccgctcc
ttcctggagcaggatgcggcccggcagcgcctggtggtgcaggtgagggatggagggcag
ccatcgctctctgccactgtgtccctcctgctttctgtggtggagacaatgccacagact
ctctctgacttcagcaacttcagcctccccccggaagcctcctcctcctctgcacttacc
ctctacctcctggtgtccctgggctccatctccttcaccttcctgctggccatcctcatc
ctcacagccatccggtgccgtggcatgcgatacccctggcagggtgatggctgctgctgc
tgcccccggcccaggcgctctcctgatggtctcaagacatccaacctggcagcacagcct
ggtgccagcacggccacccaccttgatgtgcctgatggtggtcccccaggctactgctac
aagctgtgcctcgggccagagtctgcccagagcgacttcatgttcctcaagccctgcagc
ctgccccgcaacaacgagaaaggtcctgggaacctgcctgggaagcggacccggccaggg
cagcccctccaaggctccaagcagataaagcagcccaacacagactggctgccccccagc
gtgcaacggcctgcactgaagagctcccagagcctggaggatgtgggggaaatccgcaaa
gccctgcagaaggagcacgagaggctgtgcacgctggtgaccccggtctctgagtttcag
aaggcctcagcgggcactaacagcatctgggcaccccagtatggccccctgtaccctggg
cacgtcccagccccagattaccagcacaacgtctacatccccggcaccccaactctgctt
tccagtaaagatggccccctggttccaggccgggagagcaagaacagcttttccaccttt
ggcaagaggaagaaaatgacgacgtactacgatatgcctgacagtgtgattatcaacaac
gacctgaaatag
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