Tympanuchus pallidicinctus (lesser prairie-chicken): 128081402
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Entry
128081402 CDS
T08967
Name
(RefSeq) protocadherin beta-15-like isoform X1
KO
K16494
protocadherin beta
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128081402
Cell adhesion molecules [BR:
tpai04515
]
Cadherins
Protocadherins
128081402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
128081402
NCBI-ProteinID:
XP_052540558
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MEGAGKGRPWRRGTASGSRSGGGGQRRVVLWLVCVCVWESGAETLRYSVWEEMARDSWVG
NVARDLGLSPSQLAARKARVVSEGSEQHFRLDPHSGVLTVTETLDRERICPHSESCALFF
KLFFENPVQLIRGEVELRDVNDNSPVFPQKEVVLDVLETATPGSRFPLDSAQDRDVGLNS
LQNYSLSPNSHFSLAVETGKGAAEFVKLVLERPLDREEQRELHLVLTATDGGSPPRSGTA
EVRVVVLDANDNMPVFSREVYEVRVAENSPPGQLVVRVSAADPDEGTNGKVRYEFTQTSE
GSREPFDLNPESGEIRVSGNLDFEEAKTHKLVVRATDGGGLSAHCKVHVEVLDENDNAPE
IELSSVSASIPEDAPPRTVVALLSVRDRDSGDNGRTECAVEGDVPFSLTAAFADHYELRT
SAALDRETAAEYNVSIVATDRGRARLSARESVRVRVGDVNDNAPRFTQAAYSMWVSENEA
GAVRIGSVKATDADAGANGRVRYALVREEGEERPAVSVDGESGAVSVVRPLDYEQVRAVE
VTVVAADGGSPPRSATALVRVLVRDENDNAPVVLHPPADGGAALGELVPRRARAGYLVAK
VVAVDADAGQNAWLCYELAKATEPGLFRVGLHSGEVRTARAVGERDAARHRLVVLVRDRG
RPPRSASATLAVALADGFSEGRLRASEEAPAAEPDGRLTLYLSVCLACVSALFVAGAAAA
VAAHVRRARRGEPGTLPAFPRSAADSGAGSLPRSYVYDVRLAAGTVDSEFRFLGPLLPCF
PAGLPHGAAERRSSLCSAGLGQEEGDWAVQGRAPVSEGTGARAAEENASLDQSPWLSHQ
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccgggaaaggccggccgtggcggagggggacggcgagcgggagccggagc
ggcggcggcggccagaggcgagtggtgctgtggctcgtgtgcgtttgcgtgtgggagagc
ggggccgaaacgctgcgctattccgtgtgggaggaaatggcgagggactcgtgggtgggc
aacgtcgcccgggacctggggctttctccgagccagctggcggctcgcaaggcgcgcgtg
gtgtccgaggggagcgagcagcatttccgcctggatccgcacagcggcgtcctgacggtc
acggagacgctggaccgagagcggatctgtccgcacagcgagagctgcgcgctcttcttt
aagctgttctttgagaacccggtgcagctgatccgcggggaggtggagcttcgcgacgtg
aacgacaactcccccgtgttcccgcagaaggaggtggttctggacgttcttgaaacggcg
actcctggatctcggttcccactagatagcgcccaggacagagacgtggggctgaacagc
ttacagaattacagcctctccccgaattcacatttctccctagcagtcgaaacagggaaa
ggggctgctgaattcgtgaagctcgtcctcgagaggcctttggaccgcgaggagcagcgg
gagctgcatttggtgctgacggccacggacgggggctcgccgcccaggtcgggcacggct
gaggtgcgggtggtggtgctggatgccaacgacaacatgccggtgttctcgcgggaggtg
tacgaggtgcgcgtggccgagaacagccccccggggcagctggtggtgcgggtgtcggcc
gcggatcccgatgagggaaccaacggcaaagtgcggtacgagttcacgcagacatcggaa
ggatcccgagagccctttgatctgaaccctgagagcggagagattcgggtttcgggcaat
cttgattttgaagaagcaaagactcacaagctggtggtgagagccacagacggcggcggt
ctgtctgcgcactgcaaagtgcacgtggaggtgctggacgagaacgacaacgcgccggag
atcgagctgagctcggtgagcgcgtccatccccgaggacgccccgccgcgcaccgtggtg
gccctgctgagcgtgcgggaccgcgactccggcgacaacgggcggacggagtgcgccgtg
gagggcgacgtgccgttcagcctgacggccgcgttcgccgaccactacgagctgcgcacc
agcgcggccctggacagggagacggcggccgagtacaacgtgagcatcgtggccacggac
cggggccgggcgcggctgagcgctcgcgagagcgtgcgggtgcgggtcggcgacgtgaac
gacaacgcgcctcgcttcacgcaggcggcgtacagcatgtgggtgagcgagaacgaggcg
ggcgcggtgcggatcggcagcgtgaaggcgacggacgcggacgcgggcgcgaacgggcgc
gtgaggtacgcgctggtgcgggaggagggcgaggagcggcccgccgtgtcggtggacggc
gagagcggggccgtgtccgtggtgcggccgctggactacgagcaggtgcgcgccgtggag
gtgacggtggtcgccgccgacgggggctcgccgccgcggagcgccacggcgctggtgcgg
gtgctggtgcgggacgagaacgacaacgcgcccgtggtgctgcacccgccggccgacggc
ggcgcggcgctgggcgagctggtgccgcggcgggcgcgggcgggctacctggtggccaag
gtggtggcggtggacgcggacgcggggcagaacgcgtggctgtgctacgagctggccaag
gcgacggagccggggctgttccgcgtggggctgcacagcggcgaggtgcgcacggcgcgg
gccgtgggcgagcgcgacgcggcccggcacaggctggtggtgctggtgcgggaccgcggg
cggccgccgcgctccgccagcgccacgctggccgtcgccctggccgacggcttctccgaa
ggccgcctgcgggcgagcgaagaggcgccggccgccgagcccgacggccgcctcaccctg
tacctcagcgtctgcttggcctgcgtgtccgcgctcttcgtggccggcgcggcggccgcc
gtggccgcccatgtgcggcgggcccggcggggcgagccggggaccttgcccgccttcccg
cgctccgccgccgacagcggcgccggctccctgccccgcagctacgtctacgacgtgcgc
ctcgccgccggcaccgtcgacagcgagttccgcttcctcgggccgctcttgccctgcttc
cccgccgggctgccgcacggcgcggccgagcgccggagctcgctgtgctcggccggcctc
ggccaagaagaaggcgactgggccgtgcagggccgagctcccgtctctgaaggcacgggt
gccagggcagcagaggagaatgccagtttggatcaaagcccctggctcagccatcagtaa
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