Tympanuchus pallidicinctus (lesser prairie-chicken): 128081406
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Entry
128081406 CDS
T08967
Name
(RefSeq) protocadherin beta-15-like isoform X1
KO
K16494
protocadherin beta
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128081406
Cell adhesion molecules [BR:
tpai04515
]
Cadherins
Protocadherins
128081406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
128081406
NCBI-ProteinID:
XP_052540563
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MAAARQVLCVWALLGVARVRCEPIRYSVAEEGESGSPVGDVAEDAGLAPAQLWARRARIA
SPAGRQHFGLERGSGRLVLAERLDREELCGRSRTCTLAFELLLADPLQFFPIEVSVEDVN
DHSPVFPDERLTFEIPEFTEAGSRFPVAAAQDLDIGSNDIQAYSIVPENEFFTVSYQTQS
ESEMHVDLVLQKPLDREEQPEMDFTLVATDGGSPSRSGTTQIHIIVLDVNDNAPIFTQKV
FSGHVLENAPKGFVVLRVVANDADAGINGDITYEFTQPGGQTYSDFTVDPTSGEIRVMKS
LDFETVQKYEFSLRAVDGGGLSAMCKVVVEVMDVNDNAPEIVVSSFSSPIPENAAPGTVV
ALFSVTDKDSGVNGEISCALAEQLSFSLRPAFKNYYELVTVSALDREQTARYTVVVTAAD
AGSPRLSGSHTFTVDVSDVNDNAPVFNQTSYTMYVHENNVPALLVGAVQARDADAGANGK
VSYSLVAADPPEREPCSCVSVNSESGAVFVLRPLDYEQLRQLEVVVSAADAGSPPLSSSV
GVRLLVVDENDNAPLVLHPSAQDGGPAWSEPVPAWAEAGDLVSKVVAVDADSGQNSWLSY
RLLRATEPGLFAVGAQSGEVRLRRPPTERDAAKQKLVVLVRDNGRPPLSATAALSVLLVH
GSRDAELPQQSPAAHDDDGSLTASLIVALVLVSLLFLVSAAAFAACKACKSKEPSSGHVL
YGPSGVPSCVADGAAAGTLPHAYCYELSLTTGSGSSEFQFLKPVLPSLPAQRCSTGVAGD
DAEHFPAVPVPVGDADVESPGMQAVGQFHGL
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgaggcaagtgctgtgtgtgtgggctttgctgggcgtggcgcgcgttcgc
tgcgagcccatccgctactccgtggccgaggagggcgagagcggctcgccggtgggcgac
gtggcggaggacgcggggctggccccggcgcagctctgggctcgccgggcgcgcatcgcc
tcgccggccggccggcagcactttggcttagagcgcggcagcggccgcctcgtgctcgcc
gagcggctcgatcgggaggagctgtgcggacgctcccgcacctgcacgctcgccttcgag
ctgctgctcgccgacccgctgcagttctttcccattgaggtgtccgtggaggacgtcaat
gaccactcgccggtcttcccggacgaaaggctgacctttgagatccctgaatttactgaa
gctggctcccgtttccctgtggcagcagctcaggacctggacattggcagcaatgacatc
caggcttacagcatcgttcctgagaacgagttcttcactgtctcctatcagactcaaagt
gagagcgagatgcatgtcgaccttgttttgcaaaagcctctggacagggaggagcagcca
gagatggatttcactctcgttgcaacggatgggggctctccctcgaggagtggaaccacc
caaatccacatcatagttttggacgtaaatgacaatgctccaatcttcacacagaaagtg
ttcagtgggcatgttttggaaaatgctccaaagggttttgtggttctcagagtggtggca
aatgatgcagatgcgggtattaatggtgacattacatatgaatttacacaaccaggtgga
cagacgtattcagattttacagttgaccccacgagtggtgaaattcgagtcatgaaaagt
ctggattttgagactgtgcagaaatatgaattcagtttgagggccgtggacggagggggc
ctttcagccatgtgcaaggtagtggtggaggtgatggatgtgaacgacaacgcaccagag
atcgtggtcagttccttcagcagcccgatccctgagaatgcagcacccgggacagtggtc
gccctcttctctgtcaccgacaaggattccggtgtgaatggggagatcagctgtgccctg
gcagaacagctgtcgttctccctgcggccggcctttaagaactactacgagctggtgacc
gtgagcgcgttggaccgggagcaaacggcacgttacacggtggttgtcacggccgcagat
gcagggtctcctcgtctgagcggcagccacacgttcaccgtggacgtctcggacgtgaat
gacaacgcgcccgtgttcaaccagacgtcgtacaccatgtacgtgcacgagaacaacgtc
cccgcgctgctggtcggggccgtgcaggcaagggacgcggacgcgggagccaacggcaag
gtgagctattcgctggtggcggccgatccgcccgagcgagagccgtgctcgtgcgtgtcc
gtgaactccgagagcggagccgtgttcgtgctgcggccgctggactacgagcagctgagg
cagctggaggtggtggtgagcgctgcggacgcggggtcccctcccctgagcagcagcgtc
ggcgtccgcctgctggtggtggacgagaacgacaacgcgccgctggtgctgcaccccagc
gcgcaggacggcggccctgcttggagcgagccggtgcccgcgtgggccgaagcgggggac
ctggtgagcaaagtggtggccgtggacgccgactcggggcagaactcgtggctttcgtac
cggctgctgagggccacggagccggggctgtttgccgtgggcgcccaaagcggggaggtg
cggctgaggaggccgccgacggagagggacgcggcgaagcagaagctggtcgtgctggtg
cgggacaacgggcggccgccgctgtcggccacggcggcgctcagcgtgctcctcgtgcac
ggctcccgggacgctgagctgccgcagcagagccccgccgcgcacgacgacgacggctcc
ctcaccgcctccttgatcgtcgccttggtcttggtctcgctcctgttcctggtgtcggcg
gcggcctttgcggcgtgcaaggcgtgcaagagcaaggagccgagtagcgggcacgtgctg
tacggccccagcggcgtgccgagctgcgtggctgacggggccgctgccggcaccctgccc
cacgcctattgctacgagctcagcctcaccacgggctcgggcagcagcgagttccagttc
ctcaagcccgtgctgcccagcctgccggcgcagcgctgcagcacgggggtggccggcgac
gatgccgagcatttccctgctgtccctgtccccgtgggggatgctgatgtcgagagcccc
gggatgcaggctgtgggacagtttcacggcttgtaa
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