Tympanuchus pallidicinctus (lesser prairie-chicken): 128081409
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Entry
128081409 CDS
T08967
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128081409
Cell adhesion molecules [BR:
tpai04515
]
Cadherins
Protocadherins
128081409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
128081409
NCBI-ProteinID:
XP_052540577
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MAAARQVLCVWALLGVARVRCEPIRYSVAEEGESGSPVGDVAEDAGLAPAQLWARRARIA
SPAGRQHFGLERGSGRLVLAERLDREELCGRSRTCTLAFELLLADPLQFFPIEVSVEDVN
DHSPVFPGERLTFKIPELTEAGSRFPVEAAQDLDIGSNDIQAYSIAPENEFFSVFRQSES
AKFIELILQKPLDREEQPEMDFSLIATDGGSPPRTGSTQVHIVVLDVNDNAPVFTEKQYI
VNVLENAPEGSVILKVIASDADEGANGDISYQLSQSAGRSHSLFTINSRTGEIEIAQALD
FETAQKHEFTVLAIDGGGLSAMCNVVVDVMDVNDNAPEIVVSSFSSPIPENAAPGTVVAL
FSVTDKDSGVNGEISCALAEQLSFSLRPAFKNYYELVTVSALDREQTARYTVVVTAADAG
SPRLSGSHTFTVDVSDVNDNAPVFNQTSYTMYVHENNVPALLVGAVQARDADAGANGKVS
YSLVAADPPEREPCSCVSVNSESGAVFVLRPLDYEQLRQLEVVVSAADAGSPPLSSSVGV
RLLVVDENDNAPLVLHPSAQDGGPAWSEPVPAWAEAGDLVSKVVAVDADSGQNSWLSYRL
LRATEPGLFAVGAQSGEVRLRRPPTERDAAKQKLVVLVRDNGRPPLSATAALSVLLLHGS
RDAELPQQSPAAHDDDGSLTASLIVALVLVSLLFLVSAAAFAACKACKSKEPSSGHVLYG
PSGVPSCVADGAAAGTLPHAYCYELSLTTGSGSSEFQFLKPVLPSLPAQRCSTGVAGDDA
EHFPAVPVPVGDADVESPGMQAVGQFHGL
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgaggcaagtgctgtgtgtgtgggctttgctgggcgtggcgcgcgttcgc
tgcgagcccatccgctactccgtggccgaggagggcgagagcggctcgccggtgggcgac
gtggcggaggacgcggggctggccccggcgcagctctgggctcgccgggcgcgcatcgcc
tcgccggccggccggcagcactttggcttagagcgcggcagcggccgcctcgtgctcgcc
gagcggctcgatcgggaggagctgtgcggacgctcccgcacctgcacgctcgccttcgag
ctgctgctcgccgacccgctgcagttctttcccattgaggtgtccgtggaggacgtcaat
gaccactcgccggtcttcccgggcgaacggctgacctttaagatcccagaactgacagaa
gctggctcccgtttcccagtggaggctgctcaggacctggacattggcagcaatgacatc
caggcttacagcatcgctcctgagaacgagttcttcagtgtcttcaggcagagcgagagc
gccaagtttatagaactgattttgcaaaagcctctggacagagaggagcagccagagatg
gatttctctctcattgccacagatgggggctctccaccacgcacaggttccactcaagtg
cacattgttgttctggatgtaaatgacaatgctccagtcttcacagagaagcagtatatc
gttaacgttctggaaaatgctccagagggttcggtgattctcaaagtcatcgccagtgat
gcagatgagggtgctaatggtgacatttcctatcagctcagccaatcagctggacgtagc
cattcattattcacaattaactccagaacaggtgaaattgaaattgcacaggctttggat
tttgagaccgcacaaaaacatgagttcaccgtgctggcaattgacggtgggggtctctca
gccatgtgcaatgtggtagtggatgtgatggatgtgaacgacaacgcaccagagatcgtg
gtcagttccttcagcagcccgatccctgagaatgcagcacccgggacagtggtcgccctc
ttctctgtcaccgacaaggattccggtgtgaatggggagatcagctgtgccctggcagaa
cagctgtcgttctccctgcggccggcgtttaagaactactacgagctggtgaccgtgagc
gcgttggaccgggagcaaacggcacgttacacggtggttgtcacggccgcagatgcaggg
tctcctcgtctgagcggcagccacacgttcaccgtggacgtctcggacgtgaatgacaac
gcgcccgtgttcaaccagacgtcgtacaccatgtacgtgcacgagaacaacgtccccgcg
ctgctggtcggggccgtgcaggcaagggacgcggacgcgggagccaacggcaaggtgagc
tattcgctggtggcggccgatccgcccgagcgagagccgtgctcgtgcgtgtccgtgaac
tccgagagcggagccgtgttcgtgctgcggccgctggactacgagcagctgaggcagctg
gaggtggtggtgagcgctgcggacgcggggtcccctcccctgagcagcagcgtcggcgtc
cgcctgctggtggtggacgagaacgacaacgcgccgctggtgctgcaccccagcgcgcag
gacggcggccctgcttggagcgagccggtgcccgcgtgggccgaagcgggggacctggtg
agcaaagtggtggccgtggacgccgactcggggcagaactcgtggctttcgtaccggctg
ctgagggccacggagccggggctgtttgccgtgggcgcccaaagcggggaggtgcggctg
aggaggccgccgacggagagggacgcggcgaagcagaagctggtcgtgctggtgcgggac
aacgggcggccgccgctgtcggccacggcggcgctcagcgtgctcctcctgcacggctcc
cgggacgctgagctgccgcagcagagccccgccgcgcacgacgacgacggctccctcacc
gcctccttgatcgtcgccttggtcttggtctcgctcctgttcctggtgtcggcggcggcc
tttgcggcgtgcaaggcgtgcaagagcaaggagccgagtagcgggcacgtgctgtacggc
cccagcggcgtgccgagctgcgtggctgacggggccgctgccggcaccctgccccacgcc
tattgctacgagctcagcctcaccacgggctcgggcagcagcgagttccagttcctcaag
cccgtgctgcccagcctgccggcgcagcgctgcagcacgggggtggccggcgacgatgcc
gagcatttccctgctgtccctgtccccgtgggggatgctgatgtcgagagccccgggatg
caggctgtgggacagtttcacggcttgtaa
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