Tympanuchus pallidicinctus (lesser prairie-chicken): 128081424
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Entry
128081424 CDS
T08967
Symbol
GRIA1
Name
(RefSeq) glutamate receptor 1 isoform X1
KO
K05197
glutamate receptor 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04080
Neuroactive ligand-receptor interaction
tpai04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128081424 (GRIA1)
04082 Neuroactive ligand signaling
128081424 (GRIA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128081424 (GRIA1)
Ion channels [BR:
tpai04040
]
Ligand-gated channels
Glutamate (ionotropic)
128081424 (GRIA1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF659
DUF2061
Motif
Other DBs
NCBI-GeneID:
128081424
NCBI-ProteinID:
XP_052540604
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MQHIFAFFCTSFLGVVLGANFPNNIQIGGLFPNQQSQEHAAFRFALSQLTEPPKLLPQID
IVNISDSFEMTYTFCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVETSNQ
FVLQLRPELQDALISVIEHYSWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVNILTT
TEEGYRMLFQELQKKKERLVVVDCESERLNIILSKIIKLEKNGNGYHYILANMGFMDIDL
TKFRESGANVTGFQLVNYTDTVPARIMQQWRNNDARELPRVDWKRPKYTSALTYDGVRVM
AEAFQNLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLSGNVQFNEKGR
RTNYTLHVIEMKHDGIRKIGYWNEDEKLVPVAIDTQTGNESTSLQNRTYIVTTILEDPYV
MLKKNANQFEGNERYEGYCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTKTWNGMVGE
LVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIW
MCIVFAYIGVSVVLFLVSRFSPYEWHTEEFEEGRDQPANDQTNEFGIFNSLWFSLGAFMQ
QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIA
YGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLES
TMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQGVLDKLKSKW
WYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSRSESKRMK
GFCLIPQQSINEAIRTSTLPRPAAAGGSGENGRVVSHDFPKSMQTIPCMSHSTGMSLGAT
GL
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacatttttgccttcttctgcaccagtttcctaggggtggtgttaggggccaat
ttccccaacaatatccagataggggggttatttcctaatcaacaatcccaggaacatgcg
gcttttaggtttgcactgtctcagctcacggaaccccctaagctccttccccagatcgac
attgtgaacatcagcgacagctttgagatgacatacaccttctgctcacagttctccaag
ggtgtttatgccatctttggattttacgagaggaggaccgtcaacatgctcacttctttc
tgcggggctcttcacgtctgtttcataacacccagctttcccgtcgaaacgtccaaccag
tttgttctccagcttcgcccagagctccaggatgccctcatcagtgtcatcgaacattac
agctggcagaagtttgtgtacatttatgatgctgaccgggggctgtcagtcctacagaaa
gtactggacactgcagccgagaaaaactggcaggtgacagctgtcaacatcctgacaaca
actgaagagggctaccgcatgctgttccaggagctgcagaagaagaaggagagactggtg
gtggtggactgtgaatccgagcggctgaacatcatccttagcaagatcatcaagcttgaa
aaaaatgggaacgggtaccactacattttggcaaacatgggattcatggacatcgatctg
acgaaattcagggagagcggagccaacgtcactggcttccagttggtgaattacacagat
actgttcccgccaggatcatgcagcagtggaggaataatgatgccagggagcttcctcgt
gtggactggaagaggccaaaatacacttcagcccttacgtacgatggggtccgggtgatg
gctgaggcatttcagaacctgcggaggcagcggatcgacatctcccgacgtggcaatgct
ggggactgcctcgccaacccggccgtgccctggggacaaggaattgacatccagagagca
ttgcagcaggtccgttttgaaggattgtcaggcaatgttcagtttaatgagaaggggcgg
aggaccaactacaccctccatgtgattgagatgaaacacgacgggatcagaaagattggt
tattggaacgaagatgaaaagttagttccagtagccatagatactcaaaccggcaacgag
tccacgagcctccagaacaggacgtacatagtcacaacgatcctagaagacccatacgtg
atgctcaagaagaatgccaaccagtttgaaggcaatgaaaggtatgaaggctactgtgtg
gagcttgctgctgagattgcaaagcatgttggctaccactacaggctggagattgtcaga
gatgggaagtatggagcccgggaccctgacaccaaaacatggaacggcatggtgggagaa
cttgtttatgggagggctgatgtggctgtggcaccattaaccatcactctggttcgagaa
gaagttatagacttttccaaaccttttatgagcttaggtatctctatcatgataaaaaag
cctcagaagtccaaaccaggagtgttctcttttctggaccctttggcctatgaaatatgg
atgtgcattgtttttgcctacattggagtgagcgttgtcctcttcttggtgagtcgcttc
agcccttatgagtggcacactgaggagtttgaggaaggacgggaccagccagccaacgat
caaacgaatgaatttgggatattcaacagtctctggttctccctgggagcttttatgcag
caaggatgtgatatttctccaaggtccctctccggccgcatagtcggtggtgtctggtgg
ttcttcactttgatcatcatatcctcctacacagctaacctggctgccttcctcacagtg
gaaaggatggtttctcccatcgagagtgcagaggacttggccaagcagacggaaatcgcc
tatgggaccctggaagctggctccactaaagagttttttaggcgatccaaaatagcagtg
tttgagaagatgtggacatacatgaagtcagctgaaccctccgtttttgtgaggacaaca
gaagaggggatgatccgggtgaggaagtcgaaaggaaagtatgcctacctcttggagtcc
accatgaacgagtacatcgagcagcggaagccctgtgacaccatgaaggtgggaggtaac
ttggactccaaaggctatggcattgcaacgccaaaggggtctgctctgagaggtcccgta
aacctagcggttttgaaactcagtgagcaaggcgtcttagacaagctgaaaagcaaatgg
tggtacgataaaggggaatgtggaagcaaggactccggaagtaaggacaagacgagcgct
ctgagtctcagcaatgtggcgggggttttctatatcctcatcggcgggctcggactagcc
atgctggttgccttaatcgagttttgttacaagtccagaagtgaatcaaagcggatgaag
ggtttttgtttaatcccacagcaatcaatcaacgaagccatacggacatcaacccttccc
aggccggctgcagcaggaggcagtggagaaaacggacgtgtggtcagccacgatttcccc
aaatccatgcagacgatcccgtgcatgagccacagcactggcatgtccctgggagccacg
ggattataa
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