Tympanuchus pallidicinctus (lesser prairie-chicken): 128081452
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Entry
128081452 CDS
T08967
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128081452 (SOX30)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128081452 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
128081452
NCBI-ProteinID:
XP_052540657
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All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MERGGGDCHGRDSDLDLCSQGPSGGQEAQAPLQETRVKAKELQQEDGGFSARLEGSKEAG
GELRCSPAPWGGKEKAKEDREKRGGEEQEDVEVVEIRGGVKEPRPGARADGDEDGAAGRA
SRGLAHAGGDGGVAQAGEGLGVLPEDLKIPLVLRPLPPGARIQVQGPLLPKLIQVSKGPV
SQVPLKMQTLLEPSVKIETKNVPLTVLPSDSGMPDTPFSKDKTGHVKRPMNAFMVWARIH
RPALAKANPNANNAEISVQLGLEWSKLTEEQKQPYYDEARKIKQRHREEFPGWVYQPRPG
KRKRYPLAVSAVFSSTTQNIITTNPVAVYPFSSPAFPAAMHNIQKNIGHPVCEAPSASRL
PASSIQRPSPINLFRPAIASTTPVAVPAPTLPLRPVIASQHFAEPTQREARDVSSGSYCF
LKRSTPVVVDLSSRSSSATSNTSDRFSVPNSEFPKEFSGISAYPRGVLLPQVTPLPHSHL
CESPPIGQAASLYGVPPQFSFYHPYFVPGPHYIPSSTCPFSRPPFGCGNFSSSVPECFGF
YGDGYQKQEMKFSPLYRDYSFRGHPGGRIREDSRVCTDLEEVTYHSSHSEESCISISPIS
QLDTGALENDLPATPPSPSSIQLVNVTDSEDEEEKKVLQEL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggagcggggcgggggcgactgccacggccgggattctgacctcgatctctgctctcag
ggtccctcaggcggtcaggaggcccaggcgcccctccaggagacgcgcgttaaagccaag
gagctgcagcaggaggatggaggcttctccgcccgtcttgagggcagcaaggaagccgga
ggggagctcaggtgctctccagctccgtgggggggaaaagagaaggcaaaagaggatcga
gaaaagcgcggcggagaagagcaagaagacgtggaggtggtggagatcagaggaggcgtg
aaggaaccccgtcccggagcgagggcggatggggacgaggacggtgctgcaggcagggcc
tcgcgcgggctcgcacacgccggcggtgatggcggtgtggcgcaggccggtgaggggctg
ggggtcctccctgaggacctgaagatccccctggtgcttcgccctttgccgcctggtgcc
cgtatacaggtccaaggccccctgctgccaaagctgatccaggtgtcaaaggggcccgtg
agccaagtgcctcttaaaatgcagaccctgctggagccttccgtaaaaattgaaactaaa
aacgttcccctcacagtactgccctccgattcaggtatgccagatactccattcagcaag
gacaaaactggccacgtaaagcgtccaatgaatgcatttatggtgtgggctaggattcac
cgacctgccctagctaaagccaaccccaatgccaataatgctgaaatcagtgttcagctg
gggttggagtggagcaaactgactgaagagcagaaacagccctattatgatgaagctcgg
aaaataaaacaaaggcacagagaggaatttcctggttgggtttatcaaccacgaccaggc
aagaggaagcgttatccactggctgtctctgctgtattttccagcactacccagaatatc
atcactacaaatccagttgctgtttatcccttttcatcgcctgcatttcctgctgccatg
cacaatattcagaaaaatattggacatccagtctgtgaagctccttctgccagccggctg
ccagcttcttctattcaacgtccaagtccaattaatcttttccgacctgctattgcaagc
accactccagtagcagttccagctccaaccctgcctctgcgccctgtaattgcatcacag
cactttgctgagcctactcagagagaagctcgtgatgtatcatctggatcctattgcttt
ctgaagagatcaacaccagttgttgttgatctctccagtagaagttcaagtgccacatca
aacactagtgacagattttctgtccctaatagcgagtttccaaaggagttctcagggatt
tctgcttatcctagaggtgtacttcttccccaggtcacacctcttcctcattcgcatctc
tgtgagagtcctcccattgggcaggcagccagtctgtacggagtacctcctcagttttca
ttttatcacccctactttgttcctggacctcactatatcccctcaagcacgtgcccattc
agccgtcccccttttggctgcgggaatttctccagctcagtgcctgaatgctttggcttc
tatggagatggctaccaaaagcaggagatgaagttttcacctctgtacagagattactct
ttcaggggacacccagggggaagaatacgtgaagactcacgtgtctgcacagacctcgaa
gaagtgacctatcacagcagccacagcgaggagagttgcattagtattagccccatatca
cagctagacactggagcacttgagaatgatttgccagccaccccaccttctccttccagc
atccagctagtcaatgtgactgacagcgaggacgaagaagaaaaaaaggtgttgcaagag
ctgtga
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