Tympanuchus pallidicinctus (lesser prairie-chicken): 128081608
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Entry
128081608 CDS
T08967
Symbol
ASCC3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpai03400
]
128081608 (ASCC3)
Enzymes [BR:
tpai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128081608 (ASCC3)
DNA repair and recombination proteins [BR:
tpai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
128081608 (ASCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_19
Motif
Other DBs
NCBI-GeneID:
128081608
NCBI-ProteinID:
XP_052540975
LinkDB
All DBs
Position
Unknown
AA seq
2211 aa
AA seq
DB search
MALPRLTGALRSFSNVTRHDDYSEELADLTKKRTKQQEQLLKSDLTWKKIIKFVDDNLDK
KEYQTVNGDLKTILQAAKQIVGAENGQEAIESGAVFLFKTFHGKECVGHDETKAIKQMFG
PFPSSSATAACNATCRIASHFTEEQLTALIQMAEEQNGDNRVFFGKNIVFSFDMHDLDHS
EELPVNGEADAQRIISLDYKKFLNNQLDHLKNCCDEKSDLKSLEKVDDSFLWSEVGKYLN
ESQGGTPGGPTMEDLCCTLYEMLASPKSGDELQNELFELLGPEGFELIEKLLQNRSVIVE
RSLACQNDNKFQALQEQCKKFIGENAKPNYGCQVTIQSEQEKLLMKQYRREEKRNARREK
QAGEDGEVSGEGLISFDPKELRMQRELALLNARSMPILGRQREVDFERIHYPHVYDSRAE
AMKTSAFIGGAKVFLPESVQRENNKMYEEVKIPHSEPMPIGIEEKIVYIKDFDEIGQLAF
KGMKRLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTILHEIRQHVQHGVIKKDEF
KIVYVAPMKALAAEMTNYFSKRLEPLGITVKELTGDMQLSKGEILRTQMLVTTPEKWDVV
TRKSVGDVALSQLVRLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATL
PNYLDVATFLHVNPYIGLFYFDSRFRPVPLGQTFIGIKTTNKVQQLNHMDEVCYENVLKQ
IMAGHQVMVFVHARNATVRTAMALREKAKNNGHICHFLSPQGSAYGQAEKQVQRSRNKQL
RELFPDGFSIHHAGMLRQDRSLVENLFSNGHIKVLVCTATLAWGVNLPAHAVVIKGTQIY
AAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIESQFL
ESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQMDPGLEKHRE
QLVIEVGRKLDKARMIRFEERTGFFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDI
LAIVSKAEEFEQIKVREEEIEELDTLLNDFCELPAPGGVENNYGKINILLQTYISRGEMD
SFSLISDSAYVAQNAARIVRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWVSPLRQFS
VLPPSVLSKLEEKNLTIDKMKDMRKDEIGHMLHHVKIGLKVKQCVHQIPSIAMEATIQPI
TRTVLRVRLNITPDFTWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFIIQKKQVITKEPQ
LLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPVT
ALGHPEYEVLYKFTHFNPIQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYP
TSKAVYIAPLKALVRERIEDWKVRIEEKLGKKVVELTGDVTPDMRAIAQADLIVTTPEKW
DGVSRSWQNRSYVQKVSILIIDEIHLLGDERGPVLEVIVSRTNFISSHTEKPVRVVGLST
ALANARDLADWLNINQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMARMNKPAFQAIRS
HSPAKPVLIFVSSRRQTRLTSLDLIAFLATEDDPKQWLKMDEREMNDIIGTVRDSNLKLT
LAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDGK
TRRYVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLDVL
ADHLNAEIAAGTITSKQDAMDYITWTYFFRRLIMNPTYYNLDNVSHDTMNKYLSSLVEKS
LFDLECSYCIEIGEDNRSIEPLTYGRIASYYYLKHPTIGMFKDQLKPESSVEELLLILTN
ADEYTDLPVRHNEDQMNSELAKHLPIEVNPHSFDSSHTKTHLLLQAHFSHAMLPCPDYAT
DTKTVLDQAIRICQAMLDVTAHHGWLVAALNITNLVQMIVQGRWVHDSSLLTVPNIEVQH
LYLFQKWSQGKRKSLHGGYQGPIECLPELMAACEGKENVFASIVDNELQTAHISQAWNFL
SRLPILHVSLSIKGCWDDPAQPQNEVPVPSLIPDTRDDKRWIKLHADQEYVLQIHLQRTQ
MGYQGKQDSKAVAPRFPKVKDEGWFLILGEVDKKELIALKRTGYVRNRNTVSLAFYTPET
PGKCIYTLYLMSDSYLGMDQQYDIYLNIIPANTSAQATTEVSDAMSYLTLK
NT seq
6636 nt
NT seq
+upstream
nt +downstream
nt
atggccttgccacgtcttacaggcgctctacgctccttttcaaatgtcactagacatgat
gattatagtgaagaattagctgacttaacgaaaaaaagaacaaaacaacaagaacagtta
ctgaagtctgatcttacttggaagaagataataaagtttgttgatgacaatttagacaaa
aaagaataccaaactgtaaatggtgatttgaaaactatattacaagcagcaaaacaaata
gttggagctgaaaatggacaagaagcaattgaaagcggagctgtttttctctttaagaca
tttcatgggaaagaatgtgttggtcatgatgagacaaaggccatcaagcagatgtttggg
ccatttccatcatcatctgctactgcagcttgtaatgccacatgtcggattgcttctcac
ttcactgaagaacagcttacagccctcatacagatggctgaggagcaaaatggtgataac
agagtgttctttggtaaaaatatagtgttttcatttgacatgcatgatttggatcactct
gaggagctgcctgtaaatggtgaggctgatgctcaaagaattataagcttagattataag
aaatttctgaataaccagctggatcatctaaagaactgctgtgatgagaagtctgatctc
aagtctttggaaaaagtagatgattcttttttatggtctgaagttggaaaatatctgaat
gaatctcagggtggtacccctggtggaccaacaatggaagatctctgctgtactttgtat
gagatgcttgcttctcccaagagcggtgatgaacttcaaaatgagttatttgaactgcta
ggccctgagggctttgaacttatagagaagctcctacagaacagatctgtgattgtggaa
agatctttggcttgtcaaaatgataacaagttccaggctttgcaagagcagtgcaagaag
tttataggtgaaaatgctaaacccaattatggctgtcaagttacaattcagtctgaacaa
gaaaagctgttaatgaaacagtatcgtcgtgaagaaaaacgaaatgccagaagagaaaaa
caagctggggaagatggagaagtatctggggaaggacttatatcctttgatcccaaagag
ctgagaatgcaaagggaactagcacttttgaatgctcgaagtatgcctatcctaggtaga
cagagagaggtggactttgaaagaattcattatccacatgtttatgattcccgagctgaa
gctatgaaaacatcagcattcattggaggtgcaaaggtgttcttaccagaatcagttcag
agagaaaacaacaaaatgtatgaagaggtgaagatcccccatagtgaaccaatgcctatt
ggcattgaagagaaaattgtttacattaaagactttgatgagattggccaacttgctttt
aaaggcatgaaaagactgaaccgaatccaatctatagtttttgagactgcctacaacaca
aatgagaacatgctaatctgtgcacccactggagctgggaagactaacattgccatgctg
acaattcttcatgaaattcgccagcatgttcagcatggtgttatcaaaaaggatgagttc
aagattgtctatgttgctcctatgaaggctttggcagctgaaatgacaaattacttcagc
aaacgtcttgaaccactgggtattactgtgaaagagctgactggtgatatgcagctgtca
aaaggtgaaattctgcgaacacagatgcttgtgactactccagaaaaatgggatgtagta
acaagaaaaagtgttggtgatgtagctctctctcagctggtaaggctgttgattcttgat
gaagttcatctgttgcatgaagacagaggacccgtacttgaaagtatagtggcacgtact
ttacgtcaggttgaatctacacaaagcatgattaggattttgggcctttcagctacatta
cccaattatcttgacgttgctacgtttctacatgtcaatccctacattggactattctac
tttgatagccgttttcgacctgtaccactaggacaaacctttataggaattaagacaact
aataaggtgcagcagctgaatcatatggatgaagtatgttatgaaaatgtgctgaagcaa
ataatggctggtcaccaggtaatggtgtttgttcatgctagaaatgccacagtcagaact
gctatggctcttcgagaaaaagcaaaaaacaatggtcatatttgtcactttttgtcacct
caaggatcagcttatggacaagctgaaaaacaggtacagagatccagaaataagcagttg
cgtgagctgtttccagatggatttagtattcatcatgcaggaatgctgcggcaagacaga
agtttggttgagaacctgttttctaacggacatatcaaagtgctagtatgtacagctacg
cttgcctggggtgtcaatcttcctgctcatgctgttgttattaagggaacacaaatatat
gctgcaaaaagaggctcctttgttgaccttggaattttagatgtcatgcagatatttggt
cgagctggacggcctcagtttgacaaattcggagaaggcatcattattacaactcatgat
aaactcagtcattacctgacacttcttactcagcagaatccaattgaaagccagtttctt
gaaagccttgccgacaacctaaatgcagagattgctcttggaacagtaactaatgtggaa
gaagcagtaaagtggataagttacacttatctttatgtacggatgagagcaaatccatta
gtatatggcatcagtcacaaagcttatcagatggatccaggtctagaaaagcacagagaa
cagttggtaattgaagttggcaggaagctggacaaagcccgcatgattcgctttgaagaa
agaaccggctttttttcttcaacagatttaggcagaactgccagccactactatattaaa
tacaatactatagagactttcaatgaattgtttgatgctcataaaacagaaggtgatatt
cttgctatagtgtccaaagctgaagaatttgaacaaataaaggttagagaagaagaaata
gaagagctggataccttattgaatgatttctgtgaacttcctgctcctggaggtgtggaa
aacaactacggaaaaataaatatcctcctccaaacgtatattagcagaggggagatggat
agcttctcccttatttcagattctgcatatgttgcacagaatgcagctcgtattgttcga
gctctttttgagattgcccttaggaaacgttggcctgcaatgacatatcgactactgaat
ctcagcaaagtcattgacaagaggctgtggggctgggttagccctttgagacagttctct
gtgttaccaccatcagtcctctcaaagttggaagagaagaatctcactatagacaagatg
aaggacatgagaaaggatgaaataggtcatatgctgcatcatgtgaagattgggttaaag
gtaaaacagtgtgtccatcaaatcccctccattgcaatggaagcaacgattcaaccaatt
actcgcacagtgctccgagttcgcttgaacatcacacctgacttcacatggaatgatcag
gtacatggcactgttggagagccttggtggatttgggtagaagaccctactaatgatcac
atttatcattcagagtacttcatcattcagaaaaaacaggtcattactaaagaacctcaa
ctgctggtgtttacaatcccaatattcgaacctctgccttctcagtattacattcgagct
gtgtctgatagatggttaggagcagaggctgtgtgtatcataaattttcaacatctgatt
cttccagagagacatccaccccacacagagcttctagatcttcaacctttgcctgtcaca
gccttaggacatccagaatatgaagtcctctacaagttcacacacttcaatcctatccag
acccagatatttcatactctttatcacacagactgtaatgttcttcttggagcacctaca
ggttctggaaagactgttgcagctgaattagccatctttagagtttttaacaagtatccc
acatcaaaggcagtgtatattgcacccttaaaagcactcgttcgtgagagaattgaggac
tggaaagttaggattgaagaaaaacttggtaaaaaggttgtagagttgactggagatgtg
actcctgatatgagagctatcgctcaagctgatctgattgttactaccccagagaagtgg
gatggtgttagcagaagctggcagaacagaagctatgttcagaaagtttccattctcatc
atagatgaaatccatctgctaggggacgagagaggcccagtactggaagtcattgtgtct
cgaacaaacttcatctcatctcacacagagaagcctgtgagagtagttggcttatccact
gcattagcaaatgccagagatcttgctgattggctaaatattaatcagatgggtctgttc
aatttccgaccttcggtacgtccagttcctctagaggtacacattcaggggttccctggc
cagcattactgtcctcgcatggctcgcatgaacaagcctgcatttcaggcaattcgaagc
cattctccagccaagcctgttcttatttttgtttcatccagacgtcaaacaaggcttact
tccttagatctgatagctttcctagctactgaggatgatcccaaacaatggctgaagatg
gatgaaagagagatgaatgacattatagggacagttagagattcaaatttgaagctgact
cttgcttttggaataggcatgcaccatgccggtctgcatgagagagacaggaaaactgtg
gaagaattgtttgtgaactgtaaaatccaggttcttattgccacaagcacattagcttgg
ggtgtaaattttccagctcatttagtaattgttaaaggaacagaatactatgatggaaaa
acaaggcgctatgtggattatcccattacagatgtacttcagatgatgggacgtgcaggc
agaccacaatttgatgaccaaggcaaagctgtaattctagttcatgatatcaagaaagac
ttctacaaaaaattcctgtatgaacctttcccagtggaatccagcttgttagatgtgctg
gctgaccacttgaatgctgaaattgctgctggaactattacttctaagcaggatgcaatg
gattatatcacttggacttatttcttccgacgacttataatgaacccaacttactataac
ttggacaatgtgagccatgacactatgaacaaatacctctcaagccttgttgagaaatcc
ctctttgatttggaatgttcctactgtattgaaattggggaggataaccgcagtattgaa
cctctgacgtatggccgcattgcttcctattactatttgaagcatccaactattgggatg
ttcaaagatcagctgaaacctgaaagcagtgttgaagaattgctcttaattctgacaaat
gctgatgagtacacagatctacctgtgagacacaatgaagaccaaatgaacagtgagcta
gcaaaacatcttccaattgaagtcaatcctcattcatttgacagctcacacacaaaaaca
cacctcctgctgcaagcccacttcagtcatgccatgttgccttgtccagattatgcaact
gatacaaagacagtgctggaccaagcaattagaatatgtcaggcaatgctggatgtcaca
gcacatcatggctggctggtggctgctctgaatataaccaacctggtgcagatgatagtt
cagggcagatgggtacacgactcttccctgcttactgtgcccaatatagaagtacagcac
ctttatctttttcagaagtggagccaaggaaaaaggaagagtttgcatggaggttaccaa
ggtcctatcgagtgtcttcctgaacttatggctgcctgtgaaggaaaagaaaatgtgttt
gcttcaattgtggacaatgaattgcaaacagcacacatttcacaggcttggaatttcttg
tcccgcttgccaattctacacgttagcctgagcattaagggctgttgggatgacccagct
cagccacagaatgaagtgcctgttccctctttgataccagacacacgagatgacaaaagg
tggatcaaattacatgctgatcaagaatatgtgctccagatacatctgcagagaacccag
atggggtatcagggaaagcaagacagtaaagcagtggctcctcgattccctaaagttaaa
gatgaaggatggtttttaatactgggagaagttgacaaaaaagaactcatcgctctgaag
agaactggatatgtcagaaatagaaatactgtctctcttgctttttacactccagagacc
cctggaaagtgtatttacacgttgtatctcatgagcgacagttatcttggcatggaccaa
cagtatgatatttacttgaatattataccagctaatacttcagcacaagccacaacagag
gtgtctgatgctatgagttatctgactttgaagtaa
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integrated database retrieval system
