Tympanuchus pallidicinctus (lesser prairie-chicken): 128081617
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Entry
128081617 CDS
T08967
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128081617 (PRDM1)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128081617 (PRDM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
zf-C2H2_6
zf-C2HE
zf-met
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
128081617
NCBI-ProteinID:
XP_052540956
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MKMDMEDADMTLWTEADFEEKCTYIVNDHPWDPSADGGTLTQAEASLPRNLTFKYASNCK
EVTGVISKEYIPKGTRFGPLVGEIYTSDTVPKNANRKYFWRIYSSGELHHFIDGFNEDKS
NWMRYVNPGYSVQEQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDFAERLHYPSSREL
TMMNLTQTHVNPKQHSADKDELYQKSVPKKEHSVKEILKMESSPPKGKDFFQTNISPVTP
EKDLDDLRKNYSPERCFFPRVVYPIRPHIPEDYLKASLAYGMDRPSYITHSPIQSSTTPS
PSGRSSPDQSLKSSSPHSSPGVTVSPLAPTSQEHRESYPYLNGSYGSEGLGSYPGYAPPS
HLPSAFLPSYNPHYPKFLLPPFNMSCNNLSALNNINGINNFNLFPRMYPLYGNLLSGGSL
SHHMLNPTTLPSSLPSEGGRRLLQPDHPRDFLIPAPNSAFSITGAAASMKDKPCSPTSGS
PTAGTAASSEHIMQPKPTSVVLAATGGEEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYE
CNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVC
HKRFSSTSNLKTHLRLHSGEKPYQCKLCPAKFTQFVHLKLHKRLHTRERPHKCIHCHKSY
IHLCSLQVHLKGNCPVAPASGLSMEDLNRINEEIEKFDISDNADKLEEVEDNIDLTSIVE
KDILTVLRREMEGANLKVSLQRNLGNGLISSGCNLYESSDMSIMKLPHGHPLPLLPVKVK
QETVEPMDP
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggacatggaggatgctgacatgaccctgtggacggaggccgatttcgaagag
aagtgcacatacattgtcaatgaccacccatgggaccccagtgccgacggaggcaccctc
actcaggcagaggcttccttgccaaggaacttgactttcaaatacgcatcaaactgcaaa
gaggtcactggagttataagcaaagagtacatcccaaaaggaacacgctttggacccctg
gtaggagagatctataccagcgatacggttcccaagaatgcgaacagaaaatacttttgg
cggatctattcaagtggtgagcttcaccacttcattgacggatttaatgaggacaagagc
aactggatgcgttatgtaaaccctggctactcagttcaggagcagaacttggcagcctgt
cagaatggaatgaacatctacttctacactatcaagcccatccctgccaaccaagagctg
cttgtgtggtattgccgagactttgcagagaggctgcactatccctcctccagagagctg
acaatgatgaacctcacacaaacccacgtcaatccaaagcagcacagtgctgataaagat
gagctctatcagaagagcgtcccaaagaaggagcacagtgtgaaggaaatcctgaaaatg
gaatccagtcctccaaaaggaaaagacttcttccagaccaacatttcaccggttactcca
gaaaaggacttggatgatttgcgtaagaactatagcccagagaggtgtttcttccctcga
gttgtctaccctatccgacctcacattccagaagactatctgaaagcttccttagcatat
gggatggacagacccagctacattactcactcacccatccagtcatctactacaccaagt
ccttccgggaggagcagtccagaccaaagtttaaaaagttcaagccctcacagcagccca
ggggtcacagtttcacctctggcaccaacttcccaagagcacagagagtcatacccctac
ctgaacgggtcctatggctcagaaggattgggttcttatcctggatacgccccccctagc
cacctcccatctgcctttctaccatcctataacccccactatcccaaatttctgttacct
ccattcaatatgagctgtaataacctgagcgctttgaacaatatcaacggcatcaacaat
ttcaatctcttcccacggatgtatcccctctatggcaacctgctcagtggaggtagcctt
tcccaccacatgttgaaccccaccacactccccagctcattgcccagcgaaggaggccgt
cgattgctgcagcctgatcatccaagggacttcctcataccagcacctaacagtgccttc
tctatcacgggcgctgctgccagcatgaaggacaagccatgcagccccaccagcgggtca
cccacagctggtacagcagccagttcagaacacataatgcaacctaaacctacctcagtg
gtgttggctgccaccggtggtgaagaagccatgaatctcattaaaagcaagaggaatgtg
actggttacaaaaccctcccgtacccactgaagaagcagaatgggaagatcaagtacgaa
tgcaacgtttgctccaagacctttggccagctctcgaatctgaaggtgcacctccgagta
cacagcggagagagaccatttaaatgccagacttgcaataaaggcttcacacagctggct
cacctccagaagcactatctggtacacacaggagagaagccccacgagtgtcaggtttgt
cacaagcggttcagcagcaccagcaatctcaaaacccacctgcggctccactctggagag
aagccttaccagtgcaagctgtgcccagccaaattcacccagtttgtgcacctgaagctg
cacaaacgtctccacacccgggagcgtccccacaaatgcatccactgccacaagagctac
attcacctctgcagcctccaggtccacctgaagggcaactgccctgtcgctcccgcctcc
ggcctctcgatggaggacctgaaccgaatcaacgaggagatcgagaagttcgacatcagt
gacaatgccgacaagttggaagaggtggaggacaatattgacctaacgtccatcgtggag
aaggatatactgaccgtgctcagaagggaaatggaaggagctaatctcaaagtatcttta
cagaggaacctgggaaatggacttatctcctcaggatgcaacctttatgagtcttcagat
atgtcaattatgaagttgcctcacggtcacccactacctctgttacctgtaaaggtcaag
caagaaacagttgaaccaatggacccttaa
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