Tympanuchus pallidicinctus (lesser prairie-chicken): 128082014
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Entry
128082014 CDS
T08967
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128082014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpai03021
]
128082014
03036 Chromosome and associated proteins [BR:
tpai03036
]
128082014
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128082014
Coactivators
SAGA/TFTC/STAGA complex
128082014
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128082014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
128082014
NCBI-ProteinID:
XP_052541791
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MAAGASDPLEEMLLFSEEVDEKAVSDLVGSLESQLAGGRGSAEAPQPRTSALSQPQQPQQ
QQQQQRQGSLAGGGSPVRQQQGHPAPPPATGVEEAAAGRPGAAESRAPAPGPLPSPSPPA
AATAVAAAAAAGRGVSVNSSSVQQSHGAALLGGSPAAPAPPQPAAPPPAPPVNNHVAAGA
GSRDAGSPSPGRSPPAVETPPRDEAVEGSGAKGGGRAAKEGADAAEPAPLPGEAAPNGEG
AGGRAAAVPPVSGQQSPAGREGGAAQPKPAHGPQPAVNALGNSASPAPAATPPGPGSAAK
PAGVAKPGAALPAASQALSPRPALGAAPRLVAPQLIVRPPQQTTIQLPPGFTIPPGMVLV
RTDAGQLVMVPQQALAQAQMQAQVQTQGQGPASISPRLSVPTSGPVFRLTTTQQPTSVAT
STVRLGLPVQAKVVQSTATPVSATAAATLPGGSILSHTTVSVGTTNAQNLFKTTVSTGTP
TSQQPAVITGGQTQPAAQNQSQPRLPLPPHTTAQVPAQPQVIPSSPVPGTTVVSQEMQEN
VKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAKIDPEEFTGRLQSELKSSPQPY
LVPFLKKSLPALRQSLLNSQHSVLQGQPSQQSLQQTKLSQVIPQSASGSISSIVTTQTIG
IRQPNNICTVSVSNTVQPPQVKVVQSNQSSQLQIIQSTSAQTVKRNPACQTTQIRMPVVI
TQTIRPQGTVGKAPTIQASKSPGGFGVQVSANQKNKLNDPGGGSFRDDDDINDVASMAGV
NLNEESARIMATNSDLVGTQIQSCKDEPFLAAIPLHKRILEMAKKLGITDVPAEVVTFIS
HATQSRLRTVIEKVTVITQHRMESYKDDEWYEQATDVRSQLKFFEQLERLEKQRKDEQER
EILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDSP
GLLTMGGEGLSMSGGGQTGLGTPSSRQYARQKITRVNLRDFIFYMEQERETSRSLLLYRA
LLK
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcctcggatcccctggaagagatgctgctcttctccgaggaggtggac
gagaaggcggtcagcgacctggtgggctccctggaatcgcagctggccggcggccggggc
tcggccgaggcgccccagcccaggacctccgccctgtcccagccgcagcagccgcagcag
cagcagcagcagcagcgccagggcagcctggcggggggcggcagccccgtccggcagcag
caggggcaccccgcgcccccccccgctaccggggtggaggaggctgcggcgggccgtccc
ggagccgcggagagccgagcccccgccccggggccgctcccgtccccgtctcccccggcg
gcagcgacggcggtagcggcggcggcggcggcggggcggggagtgagtgtaaacagtagt
agtgtgcagcaatcacatggagcggctctgctcggcggtagccccgccgccccggccccg
ccgcagcccgccgctcccccgcccgccccgcctgtcaacaaccatgtggccgccggcgcc
ggctcccgggacgcgggcagccccagccccggccgcagcccgcccgccgtggagacgcca
ccgcgcgacgaggccgtggaggggagcggggcgaagggcggcgggcgggctgcgaaggag
ggagccgacgccgccgagcccgcgccgctgcctggcgaggcggcgcccaacggggagggc
gccgggggccgggcggcggcggtgccgccagtcagcggccagcagagcccggccggcagg
gaaggcggcgcggcgcagcccaagcccgcgcacggccctcagcccgcagtaaacgcactt
ggcaactccgccagccccgcgcccgccgccaccccgccgggaccgggctctgctgccaaa
cccgcgggcgtcgccaagccgggcgctgccctccctgccgcttcgcaggcgctgtcgcca
cggcccgcgctgggtgctgccccgaggctggtggccccgcagctgatcgtcaggccgccg
cagcagaccaccatccagctgccgccgggcttcaccatcccgcccggcatggtcttggtg
cgcacggatgctggacaacttgtgatggtacctcagcaggctctagcccaggcacagatg
caggctcaggtgcagacccagggacaaggtcctgccagcatttcgcctcgactttcagtg
cccacaagtggcccagtttttcgcctaacaacaactcagcaaccaacttctgtagccaca
tctactgttcgccttggacttccagtgcaagccaaagttgttcagtcaactgcaacacct
gttagtgctacagctgctgcaactctgccaggaggctctattctttcacataccacagta
tcagtaggtacaacaaatgctcaaaatttgttcaagactacagtatcaacgggaacaccg
acatctcaacagcctgcagtaattactggtggacaaactcaacctgcagcacaaaaccag
agtcagcctcggctcccacttccacctcatacaacagcacaagtgccagcacagccccaa
gtcataccaagctctcctgtacctggaactacagttgtatcacaggagatgcaagagaat
gtgaaaaaatgcaaaaactttttagctactcttataaaacttgcttctcataattcacct
tctccagaaacatcccgcaatgtgaaagctctggttcaggatttgttagatgcaaagatt
gatccagaagaatttacaggccgcctccaatcagaactcaaatcatctcctcagccatat
cttgtacctttccttaagaaaagtctacctgcattgagacaatctttactgaatagtcaa
cattcagttttgcaaggacagccgtctcagcagtcgcttcaacaaaccaagctatcacaa
gttatacctcaatctgcctctggaagtatttcctccattgtcacaacgcagacaatagga
ataaggcaaccaaacaacatttgcacagtctctgtatcaaatacagtgcagcctcctcag
gttaaggtggtacagtcaaatcagagttctcaactgcagattatccagtcaacatctgct
caaactgtgaaacgaaaccctgcttgccagactacccagattaggatgccagtggtaata
actcagaccattagaccacaaggcacagtagggaaggcaccaacaatacaagccagcaaa
agtcctgggggctttggtgttcaggtctctgcaaatcagaaaaacaagctgaatgaccct
ggaggtggttctttcagagatgatgatgacatcaatgatgttgcctctatggctggtgtt
aatctaaatgaagaaagtgcccgaattatggctaccaactctgacttggttggaactcag
atacagtcgtgtaaagatgaaccctttcttgctgctatacctctacataaacgcatactt
gaaatggctaaaaaattaggaattactgatgtgccagctgaggtggttacttttatttcc
catgcaacacaaagcagattaagaacagtgatagaaaaagtaacagtgataacccagcac
cgcatggaatcatacaaagatgatgaatggtatgaacaagctacagatgtccgatcacaa
ttgaagttttttgagcagttggaacgtttagaaaagcaaaggaaagatgaacaagagagg
gaaatcttgctaaaggctgccaagagtcgctcaaggcaagaggacccagagcaagctaga
ctgaaacaaaaagcaaaggagatgcagcaacaagaacttgcacaaatgaggcagagagat
gccaatctaactgcattggcagctattggtccccggaagaaacggaaacttgattcacct
ggactgcttaccatgggaggagagggcctcagtatgtctggtggaggtcagactggcttg
gggactccttcatccaggcagtatgcgcgacagaaaataacacgtgtaaacctcagggac
ttcatcttctacatggaacaggaaagagaaacgagccgttctctcctgctctatcgagct
ttgcttaaataa
DBGET
integrated database retrieval system
